Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11552:11551
Extra
PDB:
ATOM 1 O3' U A1551 41.133 40.945 135.276 1.00 64.07 O
ATOM 2 P C A1552 41.737 40.263 136.619 1.00 55.83 P
ATOM 3 OP1 C A1552 41.977 38.830 136.323 1.00 55.23 O
ATOM 4 OP2 C A1552 40.839 40.637 137.742 1.00 56.45 O
ATOM 5 O5' C A1552 43.118 41.021 136.774 1.00 56.20 O
ATOM 6 C5' C A1552 44.216 40.716 135.958 1.00 55.76 C
ATOM 7 C4' C A1552 44.948 41.964 135.545 1.00 56.02 C
ATOM 8 O4' C A1552 44.511 42.354 134.232 1.00 55.54 O
ATOM 9 C3' C A1552 44.719 43.208 136.409 1.00 56.84 C
ATOM 10 O3' C A1552 45.561 43.268 137.543 1.00 57.44 O
ATOM 11 C2' C A1552 44.948 44.364 135.448 1.00 56.82 C
ATOM 12 O2' C A1552 46.316 44.697 135.413 1.00 56.98 O
ATOM 13 C1' C A1552 44.551 43.753 134.093 1.00 55.96 C
ATOM 14 N1 C A1552 43.221 44.194 133.623 1.00 55.86 N
ATOM 15 C2 C A1552 42.912 45.536 133.368 1.00 56.21 C
ATOM 16 O2 C A1552 43.708 46.453 133.569 1.00 56.67 O
ATOM 17 N3 C A1552 41.687 45.841 132.931 1.00 56.09 N
ATOM 18 C4 C A1552 40.800 44.880 132.695 1.00 55.62 C
ATOM 19 N4 C A1552 39.618 45.280 132.246 1.00 55.54 N
ATOM 20 C5 C A1552 41.103 43.507 132.918 1.00 55.24 C
ATOM 21 C6 C A1552 42.310 43.207 133.395 1.00 55.38 C
ATOM 22 P C A1553 45.000 43.896 138.886 1.00 67.96 P
ATOM 23 OP1 C A1553 46.047 43.761 139.890 1.00 68.45 O
ATOM 24 OP2 C A1553 43.674 43.271 139.151 1.00 67.81 O
ATOM 25 O5' C A1553 44.835 45.428 138.502 1.00 68.32 O
TER
ATOM 1 O3' U B1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 2 P U B1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 3 OP1 U B1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 4 OP2 U B1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 5 O5' U B1551 37.700 41.068 134.443 1.00 63.67 O
ATOM 6 C5' U B1551 37.906 39.679 134.268 1.00 63.13 C
ATOM 7 C4' U B1551 39.284 39.294 134.705 1.00 63.23 C
ATOM 8 O4' U B1551 39.560 38.011 134.121 1.00 62.56 O
ATOM 9 C3' U B1551 40.358 40.253 134.217 1.00 63.34 C
ATOM 10 O3' U B1551 41.133 40.945 135.276 1.00 64.07 O
ATOM 11 C2' U B1551 41.224 39.475 133.230 1.00 62.67 C
ATOM 12 O2' U B1551 42.604 39.495 133.488 1.00 62.83 O
ATOM 13 C1' U B1551 40.667 38.056 133.239 1.00 62.20 C
ATOM 14 N1 U B1551 40.216 37.646 131.867 1.00 61.46 N
ATOM 15 C2 U B1551 41.024 36.804 131.101 1.00 60.88 C
ATOM 16 O2 U B1551 42.027 36.260 131.520 1.00 60.93 O
ATOM 17 N3 U B1551 40.603 36.574 129.815 1.00 60.26 N
ATOM 18 C4 U B1551 39.514 37.127 129.212 1.00 60.15 C
ATOM 19 O4 U B1551 39.296 36.818 128.061 1.00 59.58 O
ATOM 20 C5 U B1551 38.759 38.020 130.022 1.00 60.76 C
ATOM 21 C6 U B1551 39.134 38.256 131.280 1.00 61.38 C
ATOM 22 P C B1552 41.737 40.263 136.619 1.00 55.83 P
ATOM 23 OP1 C B1552 41.977 38.830 136.323 1.00 55.23 O
ATOM 24 OP2 C B1552 40.839 40.637 137.742 1.00 56.45 O
ATOM 25 O5' C B1552 43.118 41.021 136.774 1.00 56.20 O
TER
ATOM 2 P C A1552 41.737 40.263 136.619 1.00 55.83 P
ATOM 3 OP1 C A1552 41.977 38.830 136.323 1.00 55.23 O
ATOM 4 OP2 C A1552 40.839 40.637 137.742 1.00 56.45 O
ATOM 5 O5' C A1552 43.118 41.021 136.774 1.00 56.20 O
ATOM 6 C5' C A1552 44.216 40.716 135.958 1.00 55.76 C
ATOM 7 C4' C A1552 44.948 41.964 135.545 1.00 56.02 C
ATOM 8 O4' C A1552 44.511 42.354 134.232 1.00 55.54 O
ATOM 9 C3' C A1552 44.719 43.208 136.409 1.00 56.84 C
ATOM 10 O3' C A1552 45.561 43.268 137.543 1.00 57.44 O
ATOM 11 C2' C A1552 44.948 44.364 135.448 1.00 56.82 C
ATOM 12 O2' C A1552 46.316 44.697 135.413 1.00 56.98 O
ATOM 13 C1' C A1552 44.551 43.753 134.093 1.00 55.96 C
ATOM 14 N1 C A1552 43.221 44.194 133.623 1.00 55.86 N
ATOM 15 C2 C A1552 42.912 45.536 133.368 1.00 56.21 C
ATOM 16 O2 C A1552 43.708 46.453 133.569 1.00 56.67 O
ATOM 17 N3 C A1552 41.687 45.841 132.931 1.00 56.09 N
ATOM 18 C4 C A1552 40.800 44.880 132.695 1.00 55.62 C
ATOM 19 N4 C A1552 39.618 45.280 132.246 1.00 55.54 N
ATOM 20 C5 C A1552 41.103 43.507 132.918 1.00 55.24 C
ATOM 21 C6 C A1552 42.310 43.207 133.395 1.00 55.38 C
ATOM 22 P C A1553 45.000 43.896 138.886 1.00 67.96 P
ATOM 23 OP1 C A1553 46.047 43.761 139.890 1.00 68.45 O
ATOM 24 OP2 C A1553 43.674 43.271 139.151 1.00 67.81 O
ATOM 25 O5' C A1553 44.835 45.428 138.502 1.00 68.32 O
TER
ATOM 1 O3' U B1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 2 P U B1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 3 OP1 U B1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 4 OP2 U B1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 5 O5' U B1551 37.700 41.068 134.443 1.00 63.67 O
ATOM 6 C5' U B1551 37.906 39.679 134.268 1.00 63.13 C
ATOM 7 C4' U B1551 39.284 39.294 134.705 1.00 63.23 C
ATOM 8 O4' U B1551 39.560 38.011 134.121 1.00 62.56 O
ATOM 9 C3' U B1551 40.358 40.253 134.217 1.00 63.34 C
ATOM 10 O3' U B1551 41.133 40.945 135.276 1.00 64.07 O
ATOM 11 C2' U B1551 41.224 39.475 133.230 1.00 62.67 C
ATOM 12 O2' U B1551 42.604 39.495 133.488 1.00 62.83 O
ATOM 13 C1' U B1551 40.667 38.056 133.239 1.00 62.20 C
ATOM 14 N1 U B1551 40.216 37.646 131.867 1.00 61.46 N
ATOM 15 C2 U B1551 41.024 36.804 131.101 1.00 60.88 C
ATOM 16 O2 U B1551 42.027 36.260 131.520 1.00 60.93 O
ATOM 17 N3 U B1551 40.603 36.574 129.815 1.00 60.26 N
ATOM 18 C4 U B1551 39.514 37.127 129.212 1.00 60.15 C
ATOM 19 O4 U B1551 39.296 36.818 128.061 1.00 59.58 O
ATOM 20 C5 U B1551 38.759 38.020 130.022 1.00 60.76 C
ATOM 21 C6 U B1551 39.134 38.256 131.280 1.00 61.38 C
ATOM 22 P C B1552 41.737 40.263 136.619 1.00 55.83 P
ATOM 23 OP1 C B1552 41.977 38.830 136.323 1.00 55.23 O
ATOM 24 OP2 C B1552 40.839 40.637 137.742 1.00 56.45 O
ATOM 25 O5' C B1552 43.118 41.021 136.774 1.00 56.20 O
TER
Atoms:
C2: (42.912,45.536,133.368)
OP1: (41.977,38.830,136.323)
OP2: (40.839,40.637,137.742)
C4: (40.800,44.880,132.695)
O5': (43.118,41.021,136.774)
C3': (44.719,43.208,136.409)
C1': (44.551,43.753,134.093)
O4': (44.511,42.354,134.232)
C5': (44.216,40.716,135.958)
P: (41.737,40.263,136.619)
O2: (43.708,46.453,133.569)
C4': (44.948,41.964,135.545)
C2': (44.948,44.364,135.448)
O2': (46.316,44.697,135.413)
N1: (43.221,44.194,133.623)
N3: (41.687,45.841,132.931)
N4: (39.618,45.280,132.246)
C6: (42.310,43.207,133.395)
C5: (41.103,43.507,132.918)
O3': (45.561,43.268,137.543)
OP1: (41.977,38.830,136.323)
OP2: (40.839,40.637,137.742)
C4: (40.800,44.880,132.695)
O5': (43.118,41.021,136.774)
C3': (44.719,43.208,136.409)
C1': (44.551,43.753,134.093)
O4': (44.511,42.354,134.232)
C5': (44.216,40.716,135.958)
P: (41.737,40.263,136.619)
O2: (43.708,46.453,133.569)
C4': (44.948,41.964,135.545)
C2': (44.948,44.364,135.448)
O2': (46.316,44.697,135.413)
N1: (43.221,44.194,133.623)
N3: (41.687,45.841,132.931)
N4: (39.618,45.280,132.246)
C6: (42.310,43.207,133.395)
C5: (41.103,43.507,132.918)
O3': (45.561,43.268,137.543)
C4: (39.514,37.127,129.212)
N3: (40.603,36.574,129.815)
OP1: (36.604,43.242,133.902)
OP2: (37.814,41.932,132.120)
C2: (41.024,36.804,131.101)
C1': (40.667,38.056,133.239)
C3': (40.358,40.253,134.217)
O5': (37.700,41.068,134.443)
O4': (39.560,38.011,134.121)
C5': (37.906,39.679,134.268)
P: (37.007,41.943,133.327)
C4': (39.284,39.294,134.705)
C2': (41.224,39.475,133.230)
O2': (42.604,39.495,133.488)
N1: (40.216,37.646,131.867)
O4: (39.296,36.818,128.061)
O2: (42.027,36.260,131.520)
C6: (39.134,38.256,131.280)
C5: (38.759,38.020,130.022)
O3': (41.133,40.945,135.276)
N3: (40.603,36.574,129.815)
OP1: (36.604,43.242,133.902)
OP2: (37.814,41.932,132.120)
C2: (41.024,36.804,131.101)
C1': (40.667,38.056,133.239)
C3': (40.358,40.253,134.217)
O5': (37.700,41.068,134.443)
O4': (39.560,38.011,134.121)
C5': (37.906,39.679,134.268)
P: (37.007,41.943,133.327)
C4': (39.284,39.294,134.705)
C2': (41.224,39.475,133.230)
O2': (42.604,39.495,133.488)
N1: (40.216,37.646,131.867)
O4: (39.296,36.818,128.061)
O2: (42.027,36.260,131.520)
C6: (39.134,38.256,131.280)
C5: (38.759,38.020,130.022)
O3': (41.133,40.945,135.276)
Image (generated by PyMOL):