Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13013:13011
Extra
PDB:
ATOM 1 O3' G A3012 95.360 37.484 -7.857 1.00 54.33 O
ATOM 2 P C A3013 96.513 36.723 -7.071 1.00 56.26 P
ATOM 3 OP1 C A3013 96.274 35.282 -7.223 1.00 55.94 O
ATOM 4 OP2 C A3013 96.542 37.295 -5.714 1.00 55.86 O
ATOM 5 O5' C A3013 97.798 37.151 -7.864 1.00 56.91 O
ATOM 6 C5' C A3013 97.812 37.077 -9.270 1.00 57.48 C
ATOM 7 C4' C A3013 98.942 37.865 -9.842 1.00 58.11 C
ATOM 8 O4' C A3013 98.700 39.273 -9.649 1.00 58.34 O
ATOM 9 C3' C A3013 100.279 37.661 -9.194 1.00 58.04 C
ATOM 10 O3' C A3013 100.896 36.469 -9.612 1.00 58.05 O
ATOM 11 C2' C A3013 101.007 38.900 -9.641 1.00 58.68 C
ATOM 12 O2' C A3013 101.310 38.796 -11.017 1.00 59.29 O
ATOM 13 C1' C A3013 99.918 39.942 -9.491 1.00 58.67 C
ATOM 14 N1 C A3013 99.926 40.557 -8.179 1.00 58.30 N
ATOM 15 C2 C A3013 100.824 41.540 -7.885 1.00 58.61 C
ATOM 16 O2 C A3013 101.614 41.825 -8.768 1.00 59.20 O
ATOM 17 N3 C A3013 100.852 42.132 -6.690 1.00 58.30 N
ATOM 18 C4 C A3013 99.974 41.742 -5.799 1.00 57.67 C
ATOM 19 N4 C A3013 99.979 42.296 -4.595 1.00 57.36 N
ATOM 20 C5 C A3013 99.004 40.750 -6.064 1.00 57.33 C
ATOM 21 C6 C A3013 99.007 40.191 -7.269 1.00 57.66 C
ATOM 22 P U A3014 102.029 35.766 -8.704 1.00 59.06 P
ATOM 23 OP1 U A3014 102.394 34.492 -9.381 1.00 59.13 O
ATOM 24 OP2 U A3014 101.526 35.728 -7.298 1.00 58.39 O
ATOM 25 O5' U A3014 103.240 36.770 -8.813 1.00 59.59 O
TER
ATOM 1 O3' U B3010 96.352 41.241 -0.379 1.00 65.23 O
ATOM 2 P U B3011 97.766 40.999 -1.094 1.00 61.27 P
ATOM 3 OP1 U B3011 98.437 39.917 -0.338 1.00 60.84 O
ATOM 4 OP2 U B3011 98.439 42.311 -1.232 1.00 61.81 O
ATOM 5 O5' U B3011 97.317 40.488 -2.525 1.00 61.58 O
ATOM 6 C5' U B3011 97.408 39.122 -2.867 1.00 61.37 C
ATOM 7 C4' U B3011 96.068 38.441 -2.971 1.00 60.99 C
ATOM 8 O4' U B3011 96.280 37.074 -2.634 1.00 60.57 O
ATOM 9 C3' U B3011 94.978 38.934 -2.022 1.00 60.58 C
ATOM 10 O3' U B3011 93.672 38.591 -2.534 1.00 60.46 O
ATOM 11 C2' U B3011 95.229 38.111 -0.781 1.00 59.95 C
ATOM 12 O2' U B3011 94.058 37.849 -0.040 1.00 59.42 O
ATOM 13 C1' U B3011 95.808 36.815 -1.339 1.00 59.94 C
ATOM 14 N1 U B3011 96.932 36.312 -0.565 1.00 59.74 N
ATOM 15 C2 U B3011 96.607 35.420 0.402 1.00 59.12 C
ATOM 16 O2 U B3011 95.440 35.154 0.523 1.00 58.80 O
ATOM 17 N3 U B3011 97.629 34.910 1.170 1.00 58.91 N
ATOM 18 C4 U B3011 98.954 35.235 0.984 1.00 59.31 C
ATOM 19 O4 U B3011 99.822 34.728 1.697 1.00 59.11 O
ATOM 20 C5 U B3011 99.221 36.178 -0.054 1.00 59.95 C
ATOM 21 C6 U B3011 98.224 36.684 -0.779 1.00 60.14 C
ATOM 22 P G B3012 92.846 39.597 -3.482 1.00 52.72 P
ATOM 23 OP1 G B3012 93.045 40.949 -2.961 1.00 52.91 O
ATOM 24 OP2 G B3012 91.497 39.080 -3.559 1.00 52.40 O
ATOM 25 O5' G B3012 93.557 39.453 -4.908 1.00 53.35 O
TER
ATOM 2 P C A3013 96.513 36.723 -7.071 1.00 56.26 P
ATOM 3 OP1 C A3013 96.274 35.282 -7.223 1.00 55.94 O
ATOM 4 OP2 C A3013 96.542 37.295 -5.714 1.00 55.86 O
ATOM 5 O5' C A3013 97.798 37.151 -7.864 1.00 56.91 O
ATOM 6 C5' C A3013 97.812 37.077 -9.270 1.00 57.48 C
ATOM 7 C4' C A3013 98.942 37.865 -9.842 1.00 58.11 C
ATOM 8 O4' C A3013 98.700 39.273 -9.649 1.00 58.34 O
ATOM 9 C3' C A3013 100.279 37.661 -9.194 1.00 58.04 C
ATOM 10 O3' C A3013 100.896 36.469 -9.612 1.00 58.05 O
ATOM 11 C2' C A3013 101.007 38.900 -9.641 1.00 58.68 C
ATOM 12 O2' C A3013 101.310 38.796 -11.017 1.00 59.29 O
ATOM 13 C1' C A3013 99.918 39.942 -9.491 1.00 58.67 C
ATOM 14 N1 C A3013 99.926 40.557 -8.179 1.00 58.30 N
ATOM 15 C2 C A3013 100.824 41.540 -7.885 1.00 58.61 C
ATOM 16 O2 C A3013 101.614 41.825 -8.768 1.00 59.20 O
ATOM 17 N3 C A3013 100.852 42.132 -6.690 1.00 58.30 N
ATOM 18 C4 C A3013 99.974 41.742 -5.799 1.00 57.67 C
ATOM 19 N4 C A3013 99.979 42.296 -4.595 1.00 57.36 N
ATOM 20 C5 C A3013 99.004 40.750 -6.064 1.00 57.33 C
ATOM 21 C6 C A3013 99.007 40.191 -7.269 1.00 57.66 C
ATOM 22 P U A3014 102.029 35.766 -8.704 1.00 59.06 P
ATOM 23 OP1 U A3014 102.394 34.492 -9.381 1.00 59.13 O
ATOM 24 OP2 U A3014 101.526 35.728 -7.298 1.00 58.39 O
ATOM 25 O5' U A3014 103.240 36.770 -8.813 1.00 59.59 O
TER
ATOM 1 O3' U B3010 96.352 41.241 -0.379 1.00 65.23 O
ATOM 2 P U B3011 97.766 40.999 -1.094 1.00 61.27 P
ATOM 3 OP1 U B3011 98.437 39.917 -0.338 1.00 60.84 O
ATOM 4 OP2 U B3011 98.439 42.311 -1.232 1.00 61.81 O
ATOM 5 O5' U B3011 97.317 40.488 -2.525 1.00 61.58 O
ATOM 6 C5' U B3011 97.408 39.122 -2.867 1.00 61.37 C
ATOM 7 C4' U B3011 96.068 38.441 -2.971 1.00 60.99 C
ATOM 8 O4' U B3011 96.280 37.074 -2.634 1.00 60.57 O
ATOM 9 C3' U B3011 94.978 38.934 -2.022 1.00 60.58 C
ATOM 10 O3' U B3011 93.672 38.591 -2.534 1.00 60.46 O
ATOM 11 C2' U B3011 95.229 38.111 -0.781 1.00 59.95 C
ATOM 12 O2' U B3011 94.058 37.849 -0.040 1.00 59.42 O
ATOM 13 C1' U B3011 95.808 36.815 -1.339 1.00 59.94 C
ATOM 14 N1 U B3011 96.932 36.312 -0.565 1.00 59.74 N
ATOM 15 C2 U B3011 96.607 35.420 0.402 1.00 59.12 C
ATOM 16 O2 U B3011 95.440 35.154 0.523 1.00 58.80 O
ATOM 17 N3 U B3011 97.629 34.910 1.170 1.00 58.91 N
ATOM 18 C4 U B3011 98.954 35.235 0.984 1.00 59.31 C
ATOM 19 O4 U B3011 99.822 34.728 1.697 1.00 59.11 O
ATOM 20 C5 U B3011 99.221 36.178 -0.054 1.00 59.95 C
ATOM 21 C6 U B3011 98.224 36.684 -0.779 1.00 60.14 C
ATOM 22 P G B3012 92.846 39.597 -3.482 1.00 52.72 P
ATOM 23 OP1 G B3012 93.045 40.949 -2.961 1.00 52.91 O
ATOM 24 OP2 G B3012 91.497 39.080 -3.559 1.00 52.40 O
ATOM 25 O5' G B3012 93.557 39.453 -4.908 1.00 53.35 O
TER
Atoms:
C2: (100.824,41.540,-7.885)
OP1: (96.274,35.282,-7.223)
OP2: (96.542,37.295,-5.714)
C4: (99.974,41.742,-5.799)
O5': (97.798,37.151,-7.864)
C3': (100.279,37.661,-9.194)
C1': (99.918,39.942,-9.491)
O4': (98.700,39.273,-9.649)
C5': (97.812,37.077,-9.270)
P: (96.513,36.723,-7.071)
O2: (101.614,41.825,-8.768)
C4': (98.942,37.865,-9.842)
C2': (101.007,38.900,-9.641)
O2': (101.310,38.796,-11.017)
N1: (99.926,40.557,-8.179)
N3: (100.852,42.132,-6.690)
N4: (99.979,42.296,-4.595)
C6: (99.007,40.191,-7.269)
C5: (99.004,40.750,-6.064)
O3': (100.896,36.469,-9.612)
OP1: (96.274,35.282,-7.223)
OP2: (96.542,37.295,-5.714)
C4: (99.974,41.742,-5.799)
O5': (97.798,37.151,-7.864)
C3': (100.279,37.661,-9.194)
C1': (99.918,39.942,-9.491)
O4': (98.700,39.273,-9.649)
C5': (97.812,37.077,-9.270)
P: (96.513,36.723,-7.071)
O2: (101.614,41.825,-8.768)
C4': (98.942,37.865,-9.842)
C2': (101.007,38.900,-9.641)
O2': (101.310,38.796,-11.017)
N1: (99.926,40.557,-8.179)
N3: (100.852,42.132,-6.690)
N4: (99.979,42.296,-4.595)
C6: (99.007,40.191,-7.269)
C5: (99.004,40.750,-6.064)
O3': (100.896,36.469,-9.612)
C4: (98.954,35.235,0.984)
N3: (97.629,34.910,1.170)
OP1: (98.437,39.917,-0.338)
OP2: (98.439,42.311,-1.232)
C2: (96.607,35.420,0.402)
C1': (95.808,36.815,-1.339)
C3': (94.978,38.934,-2.022)
O5': (97.317,40.488,-2.525)
O4': (96.280,37.074,-2.634)
C5': (97.408,39.122,-2.867)
P: (97.766,40.999,-1.094)
C4': (96.068,38.441,-2.971)
C2': (95.229,38.111,-0.781)
O2': (94.058,37.849,-0.040)
N1: (96.932,36.312,-0.565)
O4: (99.822,34.728,1.697)
O2: (95.440,35.154,0.523)
C6: (98.224,36.684,-0.779)
C5: (99.221,36.178,-0.054)
O3': (93.672,38.591,-2.534)
N3: (97.629,34.910,1.170)
OP1: (98.437,39.917,-0.338)
OP2: (98.439,42.311,-1.232)
C2: (96.607,35.420,0.402)
C1': (95.808,36.815,-1.339)
C3': (94.978,38.934,-2.022)
O5': (97.317,40.488,-2.525)
O4': (96.280,37.074,-2.634)
C5': (97.408,39.122,-2.867)
P: (97.766,40.999,-1.094)
C4': (96.068,38.441,-2.971)
C2': (95.229,38.111,-0.781)
O2': (94.058,37.849,-0.040)
N1: (96.932,36.312,-0.565)
O4: (99.822,34.728,1.697)
O2: (95.440,35.154,0.523)
C6: (98.224,36.684,-0.779)
C5: (99.221,36.178,-0.054)
O3': (93.672,38.591,-2.534)
Image (generated by PyMOL):