Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1469:1468
Extra
PDB:
ATOM 1 O3' U A 468 64.973 -9.643 -24.215 1.00 63.04 O
ATOM 2 P C A 469 65.149 -9.695 -25.821 1.00 74.43 P
ATOM 3 OP1 C A 469 65.071 -8.306 -26.322 1.00 74.65 O
ATOM 4 OP2 C A 469 64.180 -10.679 -26.336 1.00 74.74 O
ATOM 5 O5' C A 469 66.619 -10.247 -26.009 1.00 74.62 O
ATOM 6 C5' C A 469 67.705 -9.373 -26.227 1.00 74.75 C
ATOM 7 C4' C A 469 68.920 -10.142 -26.638 1.00 75.07 C
ATOM 8 O4' C A 469 69.219 -11.142 -25.639 1.00 74.58 O
ATOM 9 C3' C A 469 68.769 -10.941 -27.915 1.00 75.83 C
ATOM 10 O3' C A 469 68.942 -10.163 -29.069 1.00 76.47 O
ATOM 11 C2' C A 469 69.801 -12.040 -27.759 1.00 75.86 C
ATOM 12 O2' C A 469 71.102 -11.555 -28.057 1.00 76.08 O
ATOM 13 C1' C A 469 69.705 -12.312 -26.261 1.00 75.03 C
ATOM 14 N1 C A 469 68.776 -13.408 -25.969 1.00 74.89 N
ATOM 15 C2 C A 469 69.261 -14.705 -26.120 1.00 75.10 C
ATOM 16 O2 C A 469 70.438 -14.840 -26.487 1.00 75.38 O
ATOM 17 N3 C A 469 68.444 -15.760 -25.861 1.00 74.99 N
ATOM 18 C4 C A 469 67.184 -15.534 -25.471 1.00 74.69 C
ATOM 19 N4 C A 469 66.419 -16.592 -25.226 1.00 74.61 N
ATOM 20 C5 C A 469 66.664 -14.216 -25.309 1.00 74.47 C
ATOM 21 C6 C A 469 67.487 -13.188 -25.561 1.00 74.58 C
ATOM 22 P C A 470 68.014 -10.432 -30.331 1.00 82.07 P
ATOM 23 OP1 C A 470 68.281 -9.343 -31.304 1.00 82.61 O
ATOM 24 OP2 C A 470 66.626 -10.617 -29.819 1.00 81.72 O
ATOM 25 O5' C A 470 68.585 -11.806 -30.889 1.00 82.51 O
TER
ATOM 1 O3' A B 467 62.602 -14.117 -21.023 1.00 69.74 O
ATOM 2 P U B 468 62.910 -14.039 -22.608 1.00 62.35 P
ATOM 3 OP1 U B 468 61.608 -13.664 -23.268 1.00 62.65 O
ATOM 4 OP2 U B 468 63.582 -15.299 -23.000 1.00 62.68 O
ATOM 5 O5' U B 468 63.928 -12.835 -22.725 1.00 62.36 O
ATOM 6 C5' U B 468 63.694 -11.627 -22.030 1.00 61.91 C
ATOM 7 C4' U B 468 64.907 -10.740 -22.041 1.00 61.91 C
ATOM 8 O4' U B 468 65.922 -11.264 -21.140 1.00 61.50 O
ATOM 9 C3' U B 468 65.605 -10.600 -23.378 1.00 62.65 C
ATOM 10 O3' U B 468 64.973 -9.643 -24.215 1.00 63.04 O
ATOM 11 C2' U B 468 67.020 -10.216 -22.964 1.00 62.47 C
ATOM 12 O2' U B 468 67.106 -8.828 -22.699 1.00 62.27 O
ATOM 13 C1' U B 468 67.197 -10.991 -21.645 1.00 61.81 C
ATOM 14 N1 U B 468 67.871 -12.259 -21.870 1.00 62.03 N
ATOM 15 C2 U B 468 69.197 -12.206 -22.262 1.00 62.31 C
ATOM 16 O2 U B 468 69.825 -11.166 -22.373 1.00 62.35 O
ATOM 17 N3 U B 468 69.814 -13.407 -22.523 1.00 62.57 N
ATOM 18 C4 U B 468 69.218 -14.643 -22.443 1.00 62.58 C
ATOM 19 O4 U B 468 69.913 -15.621 -22.729 1.00 62.85 O
ATOM 20 C5 U B 468 67.830 -14.626 -22.045 1.00 62.29 C
ATOM 21 C6 U B 468 67.218 -13.456 -21.780 1.00 62.03 C
ATOM 22 P C B 469 65.149 -9.695 -25.821 1.00 74.43 P
ATOM 23 OP1 C B 469 65.071 -8.306 -26.322 1.00 74.65 O
ATOM 24 OP2 C B 469 64.180 -10.679 -26.336 1.00 74.74 O
ATOM 25 O5' C B 469 66.619 -10.247 -26.009 1.00 74.62 O
TER
ATOM 2 P C A 469 65.149 -9.695 -25.821 1.00 74.43 P
ATOM 3 OP1 C A 469 65.071 -8.306 -26.322 1.00 74.65 O
ATOM 4 OP2 C A 469 64.180 -10.679 -26.336 1.00 74.74 O
ATOM 5 O5' C A 469 66.619 -10.247 -26.009 1.00 74.62 O
ATOM 6 C5' C A 469 67.705 -9.373 -26.227 1.00 74.75 C
ATOM 7 C4' C A 469 68.920 -10.142 -26.638 1.00 75.07 C
ATOM 8 O4' C A 469 69.219 -11.142 -25.639 1.00 74.58 O
ATOM 9 C3' C A 469 68.769 -10.941 -27.915 1.00 75.83 C
ATOM 10 O3' C A 469 68.942 -10.163 -29.069 1.00 76.47 O
ATOM 11 C2' C A 469 69.801 -12.040 -27.759 1.00 75.86 C
ATOM 12 O2' C A 469 71.102 -11.555 -28.057 1.00 76.08 O
ATOM 13 C1' C A 469 69.705 -12.312 -26.261 1.00 75.03 C
ATOM 14 N1 C A 469 68.776 -13.408 -25.969 1.00 74.89 N
ATOM 15 C2 C A 469 69.261 -14.705 -26.120 1.00 75.10 C
ATOM 16 O2 C A 469 70.438 -14.840 -26.487 1.00 75.38 O
ATOM 17 N3 C A 469 68.444 -15.760 -25.861 1.00 74.99 N
ATOM 18 C4 C A 469 67.184 -15.534 -25.471 1.00 74.69 C
ATOM 19 N4 C A 469 66.419 -16.592 -25.226 1.00 74.61 N
ATOM 20 C5 C A 469 66.664 -14.216 -25.309 1.00 74.47 C
ATOM 21 C6 C A 469 67.487 -13.188 -25.561 1.00 74.58 C
ATOM 22 P C A 470 68.014 -10.432 -30.331 1.00 82.07 P
ATOM 23 OP1 C A 470 68.281 -9.343 -31.304 1.00 82.61 O
ATOM 24 OP2 C A 470 66.626 -10.617 -29.819 1.00 81.72 O
ATOM 25 O5' C A 470 68.585 -11.806 -30.889 1.00 82.51 O
TER
ATOM 1 O3' A B 467 62.602 -14.117 -21.023 1.00 69.74 O
ATOM 2 P U B 468 62.910 -14.039 -22.608 1.00 62.35 P
ATOM 3 OP1 U B 468 61.608 -13.664 -23.268 1.00 62.65 O
ATOM 4 OP2 U B 468 63.582 -15.299 -23.000 1.00 62.68 O
ATOM 5 O5' U B 468 63.928 -12.835 -22.725 1.00 62.36 O
ATOM 6 C5' U B 468 63.694 -11.627 -22.030 1.00 61.91 C
ATOM 7 C4' U B 468 64.907 -10.740 -22.041 1.00 61.91 C
ATOM 8 O4' U B 468 65.922 -11.264 -21.140 1.00 61.50 O
ATOM 9 C3' U B 468 65.605 -10.600 -23.378 1.00 62.65 C
ATOM 10 O3' U B 468 64.973 -9.643 -24.215 1.00 63.04 O
ATOM 11 C2' U B 468 67.020 -10.216 -22.964 1.00 62.47 C
ATOM 12 O2' U B 468 67.106 -8.828 -22.699 1.00 62.27 O
ATOM 13 C1' U B 468 67.197 -10.991 -21.645 1.00 61.81 C
ATOM 14 N1 U B 468 67.871 -12.259 -21.870 1.00 62.03 N
ATOM 15 C2 U B 468 69.197 -12.206 -22.262 1.00 62.31 C
ATOM 16 O2 U B 468 69.825 -11.166 -22.373 1.00 62.35 O
ATOM 17 N3 U B 468 69.814 -13.407 -22.523 1.00 62.57 N
ATOM 18 C4 U B 468 69.218 -14.643 -22.443 1.00 62.58 C
ATOM 19 O4 U B 468 69.913 -15.621 -22.729 1.00 62.85 O
ATOM 20 C5 U B 468 67.830 -14.626 -22.045 1.00 62.29 C
ATOM 21 C6 U B 468 67.218 -13.456 -21.780 1.00 62.03 C
ATOM 22 P C B 469 65.149 -9.695 -25.821 1.00 74.43 P
ATOM 23 OP1 C B 469 65.071 -8.306 -26.322 1.00 74.65 O
ATOM 24 OP2 C B 469 64.180 -10.679 -26.336 1.00 74.74 O
ATOM 25 O5' C B 469 66.619 -10.247 -26.009 1.00 74.62 O
TER
Atoms:
C2: (69.261,-14.705,-26.120)
OP1: (65.071,-8.306,-26.322)
OP2: (64.180,-10.679,-26.336)
C4: (67.184,-15.534,-25.471)
O5': (66.619,-10.247,-26.009)
C3': (68.769,-10.941,-27.915)
C1': (69.705,-12.312,-26.261)
O4': (69.219,-11.142,-25.639)
C5': (67.705,-9.373,-26.227)
P: (65.149,-9.695,-25.821)
O2: (70.438,-14.840,-26.487)
C4': (68.920,-10.142,-26.638)
C2': (69.801,-12.040,-27.759)
O2': (71.102,-11.555,-28.057)
N1: (68.776,-13.408,-25.969)
N3: (68.444,-15.760,-25.861)
N4: (66.419,-16.592,-25.226)
C6: (67.487,-13.188,-25.561)
C5: (66.664,-14.216,-25.309)
O3': (68.942,-10.163,-29.069)
OP1: (65.071,-8.306,-26.322)
OP2: (64.180,-10.679,-26.336)
C4: (67.184,-15.534,-25.471)
O5': (66.619,-10.247,-26.009)
C3': (68.769,-10.941,-27.915)
C1': (69.705,-12.312,-26.261)
O4': (69.219,-11.142,-25.639)
C5': (67.705,-9.373,-26.227)
P: (65.149,-9.695,-25.821)
O2: (70.438,-14.840,-26.487)
C4': (68.920,-10.142,-26.638)
C2': (69.801,-12.040,-27.759)
O2': (71.102,-11.555,-28.057)
N1: (68.776,-13.408,-25.969)
N3: (68.444,-15.760,-25.861)
N4: (66.419,-16.592,-25.226)
C6: (67.487,-13.188,-25.561)
C5: (66.664,-14.216,-25.309)
O3': (68.942,-10.163,-29.069)
C4: (69.218,-14.643,-22.443)
N3: (69.814,-13.407,-22.523)
OP1: (61.608,-13.664,-23.268)
OP2: (63.582,-15.299,-23.000)
C2: (69.197,-12.206,-22.262)
C1': (67.197,-10.991,-21.645)
C3': (65.605,-10.600,-23.378)
O5': (63.928,-12.835,-22.725)
O4': (65.922,-11.264,-21.140)
C5': (63.694,-11.627,-22.030)
P: (62.910,-14.039,-22.608)
C4': (64.907,-10.740,-22.041)
C2': (67.020,-10.216,-22.964)
O2': (67.106,-8.828,-22.699)
N1: (67.871,-12.259,-21.870)
O4: (69.913,-15.621,-22.729)
O2: (69.825,-11.166,-22.373)
C6: (67.218,-13.456,-21.780)
C5: (67.830,-14.626,-22.045)
O3': (64.973,-9.643,-24.215)
N3: (69.814,-13.407,-22.523)
OP1: (61.608,-13.664,-23.268)
OP2: (63.582,-15.299,-23.000)
C2: (69.197,-12.206,-22.262)
C1': (67.197,-10.991,-21.645)
C3': (65.605,-10.600,-23.378)
O5': (63.928,-12.835,-22.725)
O4': (65.922,-11.264,-21.140)
C5': (63.694,-11.627,-22.030)
P: (62.910,-14.039,-22.608)
C4': (64.907,-10.740,-22.041)
C2': (67.020,-10.216,-22.964)
O2': (67.106,-8.828,-22.699)
N1: (67.871,-12.259,-21.870)
O4: (69.913,-15.621,-22.729)
O2: (69.825,-11.166,-22.373)
C6: (67.218,-13.456,-21.780)
C5: (67.830,-14.626,-22.045)
O3': (64.973,-9.643,-24.215)
Image (generated by PyMOL):