Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5496:5495
Extra
PDB:
ATOM 1 O3' U A 495 105.312 37.429 338.229 1.00208.19 O
ATOM 2 P C A 496 104.363 38.488 338.991 1.00204.05 P
ATOM 3 OP1 C A 496 104.094 39.596 338.038 1.00203.83 O
ATOM 4 OP2 C A 496 104.997 38.804 340.305 1.00204.61 O
ATOM 5 O5' C A 496 103.031 37.651 339.229 1.00204.34 O
ATOM 6 C5' C A 496 102.902 36.788 340.350 1.00204.79 C
ATOM 7 C4' C A 496 103.061 35.339 339.959 1.00204.33 C
ATOM 8 O4' C A 496 104.432 35.097 339.535 1.00203.75 O
ATOM 9 C3' C A 496 102.813 34.323 341.072 1.00204.80 C
ATOM 10 O3' C A 496 101.436 33.965 341.252 1.00205.18 O
ATOM 11 C2' C A 496 103.708 33.152 340.687 1.00204.21 C
ATOM 12 O2' C A 496 103.090 32.355 339.687 1.00203.75 O
ATOM 13 C1' C A 496 104.896 33.872 340.052 1.00203.71 C
ATOM 14 N1 C A 496 106.016 34.159 341.009 1.00203.98 N
ATOM 15 C2 C A 496 106.188 33.774 342.370 1.00204.57 C
ATOM 16 O2 C A 496 105.354 33.128 343.033 1.00205.01 O
ATOM 17 N3 C A 496 107.330 34.168 342.999 1.00204.70 N
ATOM 18 C4 C A 496 108.279 34.873 342.373 1.00204.27 C
ATOM 19 N4 C A 496 109.375 35.219 343.046 1.00204.43 N
ATOM 20 C5 C A 496 108.146 35.258 341.017 1.00203.67 C
ATOM 21 C6 C A 496 107.022 34.875 340.408 1.00203.55 C
ATOM 22 P G A 497 100.315 34.202 340.097 1.00213.83 P
ATOM 23 OP1 G A 497 100.090 35.665 339.986 1.00214.05 O
ATOM 24 OP2 G A 497 99.160 33.342 340.441 1.00214.17 O
ATOM 25 O5' G A 497 101.009 33.649 338.770 1.00212.91 O
TER
ATOM 1 O3' C B 494 111.131 37.211 337.690 1.00212.75 O
ATOM 2 P U B 495 110.837 38.395 338.750 1.00207.38 P
ATOM 3 OP1 U B 495 111.084 39.682 338.048 1.00207.21 O
ATOM 4 OP2 U B 495 111.618 38.090 339.974 1.00207.78 O
ATOM 5 O5' U B 495 109.279 38.230 339.050 1.00207.84 O
ATOM 6 C5' U B 495 108.401 39.353 339.018 1.00208.20 C
ATOM 7 C4' U B 495 107.121 39.040 338.277 1.00208.07 C
ATOM 8 O4' U B 495 107.253 39.463 336.896 1.00207.44 O
ATOM 9 C3' U B 495 106.737 37.567 338.240 1.00207.89 C
ATOM 10 O3' U B 495 105.312 37.429 338.229 1.00208.19 O
ATOM 11 C2' U B 495 107.307 37.103 336.900 1.00207.03 C
ATOM 12 O2' U B 495 106.656 35.981 336.340 1.00206.73 O
ATOM 13 C1' U B 495 107.148 38.351 336.025 1.00206.85 C
ATOM 14 N1 U B 495 108.207 38.497 335.006 1.00206.16 N
ATOM 15 C2 U B 495 107.928 39.168 333.835 1.00205.78 C
ATOM 16 O2 U B 495 106.826 39.632 333.590 1.00205.99 O
ATOM 17 N3 U B 495 108.996 39.272 332.970 1.00205.16 N
ATOM 18 C4 U B 495 110.282 38.789 333.150 1.00204.89 C
ATOM 19 O4 U B 495 111.135 38.959 332.275 1.00204.34 O
ATOM 20 C5 U B 495 110.485 38.114 334.392 1.00205.31 C
ATOM 21 C6 U B 495 109.467 38.006 335.249 1.00205.92 C
ATOM 22 P C B 496 104.363 38.488 338.991 1.00204.05 P
ATOM 23 OP1 C B 496 104.094 39.596 338.038 1.00203.83 O
ATOM 24 OP2 C B 496 104.997 38.804 340.305 1.00204.61 O
ATOM 25 O5' C B 496 103.031 37.651 339.229 1.00204.34 O
TER
ATOM 2 P C A 496 104.363 38.488 338.991 1.00204.05 P
ATOM 3 OP1 C A 496 104.094 39.596 338.038 1.00203.83 O
ATOM 4 OP2 C A 496 104.997 38.804 340.305 1.00204.61 O
ATOM 5 O5' C A 496 103.031 37.651 339.229 1.00204.34 O
ATOM 6 C5' C A 496 102.902 36.788 340.350 1.00204.79 C
ATOM 7 C4' C A 496 103.061 35.339 339.959 1.00204.33 C
ATOM 8 O4' C A 496 104.432 35.097 339.535 1.00203.75 O
ATOM 9 C3' C A 496 102.813 34.323 341.072 1.00204.80 C
ATOM 10 O3' C A 496 101.436 33.965 341.252 1.00205.18 O
ATOM 11 C2' C A 496 103.708 33.152 340.687 1.00204.21 C
ATOM 12 O2' C A 496 103.090 32.355 339.687 1.00203.75 O
ATOM 13 C1' C A 496 104.896 33.872 340.052 1.00203.71 C
ATOM 14 N1 C A 496 106.016 34.159 341.009 1.00203.98 N
ATOM 15 C2 C A 496 106.188 33.774 342.370 1.00204.57 C
ATOM 16 O2 C A 496 105.354 33.128 343.033 1.00205.01 O
ATOM 17 N3 C A 496 107.330 34.168 342.999 1.00204.70 N
ATOM 18 C4 C A 496 108.279 34.873 342.373 1.00204.27 C
ATOM 19 N4 C A 496 109.375 35.219 343.046 1.00204.43 N
ATOM 20 C5 C A 496 108.146 35.258 341.017 1.00203.67 C
ATOM 21 C6 C A 496 107.022 34.875 340.408 1.00203.55 C
ATOM 22 P G A 497 100.315 34.202 340.097 1.00213.83 P
ATOM 23 OP1 G A 497 100.090 35.665 339.986 1.00214.05 O
ATOM 24 OP2 G A 497 99.160 33.342 340.441 1.00214.17 O
ATOM 25 O5' G A 497 101.009 33.649 338.770 1.00212.91 O
TER
ATOM 1 O3' C B 494 111.131 37.211 337.690 1.00212.75 O
ATOM 2 P U B 495 110.837 38.395 338.750 1.00207.38 P
ATOM 3 OP1 U B 495 111.084 39.682 338.048 1.00207.21 O
ATOM 4 OP2 U B 495 111.618 38.090 339.974 1.00207.78 O
ATOM 5 O5' U B 495 109.279 38.230 339.050 1.00207.84 O
ATOM 6 C5' U B 495 108.401 39.353 339.018 1.00208.20 C
ATOM 7 C4' U B 495 107.121 39.040 338.277 1.00208.07 C
ATOM 8 O4' U B 495 107.253 39.463 336.896 1.00207.44 O
ATOM 9 C3' U B 495 106.737 37.567 338.240 1.00207.89 C
ATOM 10 O3' U B 495 105.312 37.429 338.229 1.00208.19 O
ATOM 11 C2' U B 495 107.307 37.103 336.900 1.00207.03 C
ATOM 12 O2' U B 495 106.656 35.981 336.340 1.00206.73 O
ATOM 13 C1' U B 495 107.148 38.351 336.025 1.00206.85 C
ATOM 14 N1 U B 495 108.207 38.497 335.006 1.00206.16 N
ATOM 15 C2 U B 495 107.928 39.168 333.835 1.00205.78 C
ATOM 16 O2 U B 495 106.826 39.632 333.590 1.00205.99 O
ATOM 17 N3 U B 495 108.996 39.272 332.970 1.00205.16 N
ATOM 18 C4 U B 495 110.282 38.789 333.150 1.00204.89 C
ATOM 19 O4 U B 495 111.135 38.959 332.275 1.00204.34 O
ATOM 20 C5 U B 495 110.485 38.114 334.392 1.00205.31 C
ATOM 21 C6 U B 495 109.467 38.006 335.249 1.00205.92 C
ATOM 22 P C B 496 104.363 38.488 338.991 1.00204.05 P
ATOM 23 OP1 C B 496 104.094 39.596 338.038 1.00203.83 O
ATOM 24 OP2 C B 496 104.997 38.804 340.305 1.00204.61 O
ATOM 25 O5' C B 496 103.031 37.651 339.229 1.00204.34 O
TER
Atoms:
C2: (106.188,33.774,342.370)
OP1: (104.094,39.596,338.038)
OP2: (104.997,38.804,340.305)
C4: (108.279,34.873,342.373)
O5': (103.031,37.651,339.229)
C3': (102.813,34.323,341.072)
C1': (104.896,33.872,340.052)
O4': (104.432,35.097,339.535)
C5': (102.902,36.788,340.350)
P: (104.363,38.488,338.991)
O2: (105.354,33.128,343.033)
C4': (103.061,35.339,339.959)
C2': (103.708,33.152,340.687)
O2': (103.090,32.355,339.687)
N1: (106.016,34.159,341.009)
N3: (107.330,34.168,342.999)
N4: (109.375,35.219,343.046)
C6: (107.022,34.875,340.408)
C5: (108.146,35.258,341.017)
O3': (101.436,33.965,341.252)
OP1: (104.094,39.596,338.038)
OP2: (104.997,38.804,340.305)
C4: (108.279,34.873,342.373)
O5': (103.031,37.651,339.229)
C3': (102.813,34.323,341.072)
C1': (104.896,33.872,340.052)
O4': (104.432,35.097,339.535)
C5': (102.902,36.788,340.350)
P: (104.363,38.488,338.991)
O2: (105.354,33.128,343.033)
C4': (103.061,35.339,339.959)
C2': (103.708,33.152,340.687)
O2': (103.090,32.355,339.687)
N1: (106.016,34.159,341.009)
N3: (107.330,34.168,342.999)
N4: (109.375,35.219,343.046)
C6: (107.022,34.875,340.408)
C5: (108.146,35.258,341.017)
O3': (101.436,33.965,341.252)
C4: (110.282,38.789,333.150)
N3: (108.996,39.272,332.970)
OP1: (111.084,39.682,338.048)
OP2: (111.618,38.090,339.974)
C2: (107.928,39.168,333.835)
C1': (107.148,38.351,336.025)
C3': (106.737,37.567,338.240)
O5': (109.279,38.230,339.050)
O4': (107.253,39.463,336.896)
C5': (108.401,39.353,339.018)
P: (110.837,38.395,338.750)
C4': (107.121,39.040,338.277)
C2': (107.307,37.103,336.900)
O2': (106.656,35.981,336.340)
N1: (108.207,38.497,335.006)
O4: (111.135,38.959,332.275)
O2: (106.826,39.632,333.590)
C6: (109.467,38.006,335.249)
C5: (110.485,38.114,334.392)
O3': (105.312,37.429,338.229)
N3: (108.996,39.272,332.970)
OP1: (111.084,39.682,338.048)
OP2: (111.618,38.090,339.974)
C2: (107.928,39.168,333.835)
C1': (107.148,38.351,336.025)
C3': (106.737,37.567,338.240)
O5': (109.279,38.230,339.050)
O4': (107.253,39.463,336.896)
C5': (108.401,39.353,339.018)
P: (110.837,38.395,338.750)
C4': (107.121,39.040,338.277)
C2': (107.307,37.103,336.900)
O2': (106.656,35.981,336.340)
N1: (108.207,38.497,335.006)
O4: (111.135,38.959,332.275)
O2: (106.826,39.632,333.590)
C6: (109.467,38.006,335.249)
C5: (110.485,38.114,334.392)
O3': (105.312,37.429,338.229)
Image (generated by PyMOL):