Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:146:147
Extra
PDB:
ATOM 1 O3' A A 45 47.134 -29.481 100.275 1.00 33.92 O
ATOM 2 P A A 46 48.022 -30.810 100.433 1.00 36.45 P
ATOM 3 OP1 A A 46 49.427 -30.470 100.206 1.00 36.44 O
ATOM 4 OP2 A A 46 47.432 -31.766 99.594 1.00 36.36 O
ATOM 5 O5' A A 46 47.832 -31.245 101.960 1.00 36.83 O
ATOM 6 C5' A A 46 48.085 -30.353 103.028 1.00 36.98 C
ATOM 7 C4' A A 46 46.807 -29.759 103.505 1.00 36.95 C
ATOM 8 O4' A A 46 45.879 -30.804 103.790 1.00 37.10 O
ATOM 9 C3' A A 46 46.864 -28.928 104.750 1.00 37.15 C
ATOM 10 O3' A A 46 47.195 -27.607 104.419 1.00 36.94 O
ATOM 11 C2' A A 46 45.445 -29.074 105.331 1.00 37.24 C
ATOM 12 O2' A A 46 44.573 -28.076 104.827 1.00 36.96 O
ATOM 13 C1' A A 46 44.983 -30.421 104.779 1.00 37.24 C
ATOM 14 N9 A A 46 44.979 -31.482 105.773 1.00 37.62 N
ATOM 15 C8 A A 46 45.845 -32.495 105.726 1.00 37.79 C
ATOM 16 N7 A A 46 45.723 -33.365 106.665 1.00 38.14 N
ATOM 17 C5 A A 46 44.668 -32.879 107.371 1.00 38.20 C
ATOM 18 C6 A A 46 44.036 -33.380 108.501 1.00 38.53 C
ATOM 19 N6 A A 46 44.368 -34.512 109.183 1.00 38.89 N
ATOM 20 N1 A A 46 43.022 -32.633 108.910 1.00 38.49 N
ATOM 21 C2 A A 46 42.670 -31.526 108.278 1.00 38.16 C
ATOM 22 N3 A A 46 43.200 -30.965 107.208 1.00 37.84 N
ATOM 23 C4 A A 46 44.204 -31.717 106.821 1.00 37.88 C
ATOM 24 P U A 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 25 OP1 U A 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 26 OP2 U A 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 27 O5' U A 47 48.439 -25.493 104.518 1.00 35.71 O
TER
ATOM 1 O3' A B 46 47.195 -27.607 104.419 1.00 36.94 O
ATOM 2 P U B 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 3 OP1 U B 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 4 OP2 U B 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 5 O5' U B 47 48.439 -25.493 104.518 1.00 35.71 O
ATOM 6 C5' U B 47 49.660 -25.634 103.808 1.00 35.63 C
ATOM 7 C4' U B 47 49.761 -24.591 102.725 1.00 35.28 C
ATOM 8 O4' U B 47 48.877 -24.960 101.630 1.00 35.01 O
ATOM 9 C3' U B 47 49.283 -23.202 103.128 1.00 35.23 C
ATOM 10 O3' U B 47 50.277 -22.421 103.706 1.00 35.37 O
ATOM 11 C2' U B 47 48.738 -22.614 101.854 1.00 34.85 C
ATOM 12 O2' U B 47 49.799 -22.135 101.048 1.00 34.70 O
ATOM 13 C1' U B 47 48.134 -23.844 101.199 1.00 34.77 C
ATOM 14 N1 U B 47 46.751 -24.042 101.612 1.00 34.80 N
ATOM 15 C2 U B 47 45.852 -23.166 101.051 1.00 34.56 C
ATOM 16 O2 U B 47 46.257 -22.348 100.272 1.00 34.34 O
ATOM 17 N3 U B 47 44.495 -23.248 101.352 1.00 34.58 N
ATOM 18 C4 U B 47 44.005 -24.159 102.195 1.00 34.82 C
ATOM 19 O4 U B 47 42.834 -24.077 102.365 1.00 34.81 O
ATOM 20 C5 U B 47 44.958 -25.063 102.759 1.00 35.07 C
ATOM 21 C6 U B 47 46.282 -24.988 102.478 1.00 35.06 C
ATOM 22 P A B 48 49.855 -21.318 104.753 1.00 38.76 P
ATOM 23 OP1 A B 48 51.073 -20.873 105.456 1.00 38.99 O
ATOM 24 OP2 A B 48 48.762 -21.891 105.572 1.00 38.94 O
ATOM 25 O5' A B 48 49.266 -20.172 103.811 1.00 38.42 O
TER
ATOM 2 P A A 46 48.022 -30.810 100.433 1.00 36.45 P
ATOM 3 OP1 A A 46 49.427 -30.470 100.206 1.00 36.44 O
ATOM 4 OP2 A A 46 47.432 -31.766 99.594 1.00 36.36 O
ATOM 5 O5' A A 46 47.832 -31.245 101.960 1.00 36.83 O
ATOM 6 C5' A A 46 48.085 -30.353 103.028 1.00 36.98 C
ATOM 7 C4' A A 46 46.807 -29.759 103.505 1.00 36.95 C
ATOM 8 O4' A A 46 45.879 -30.804 103.790 1.00 37.10 O
ATOM 9 C3' A A 46 46.864 -28.928 104.750 1.00 37.15 C
ATOM 10 O3' A A 46 47.195 -27.607 104.419 1.00 36.94 O
ATOM 11 C2' A A 46 45.445 -29.074 105.331 1.00 37.24 C
ATOM 12 O2' A A 46 44.573 -28.076 104.827 1.00 36.96 O
ATOM 13 C1' A A 46 44.983 -30.421 104.779 1.00 37.24 C
ATOM 14 N9 A A 46 44.979 -31.482 105.773 1.00 37.62 N
ATOM 15 C8 A A 46 45.845 -32.495 105.726 1.00 37.79 C
ATOM 16 N7 A A 46 45.723 -33.365 106.665 1.00 38.14 N
ATOM 17 C5 A A 46 44.668 -32.879 107.371 1.00 38.20 C
ATOM 18 C6 A A 46 44.036 -33.380 108.501 1.00 38.53 C
ATOM 19 N6 A A 46 44.368 -34.512 109.183 1.00 38.89 N
ATOM 20 N1 A A 46 43.022 -32.633 108.910 1.00 38.49 N
ATOM 21 C2 A A 46 42.670 -31.526 108.278 1.00 38.16 C
ATOM 22 N3 A A 46 43.200 -30.965 107.208 1.00 37.84 N
ATOM 23 C4 A A 46 44.204 -31.717 106.821 1.00 37.88 C
ATOM 24 P U A 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 25 OP1 U A 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 26 OP2 U A 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 27 O5' U A 47 48.439 -25.493 104.518 1.00 35.71 O
TER
ATOM 1 O3' A B 46 47.195 -27.607 104.419 1.00 36.94 O
ATOM 2 P U B 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 3 OP1 U B 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 4 OP2 U B 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 5 O5' U B 47 48.439 -25.493 104.518 1.00 35.71 O
ATOM 6 C5' U B 47 49.660 -25.634 103.808 1.00 35.63 C
ATOM 7 C4' U B 47 49.761 -24.591 102.725 1.00 35.28 C
ATOM 8 O4' U B 47 48.877 -24.960 101.630 1.00 35.01 O
ATOM 9 C3' U B 47 49.283 -23.202 103.128 1.00 35.23 C
ATOM 10 O3' U B 47 50.277 -22.421 103.706 1.00 35.37 O
ATOM 11 C2' U B 47 48.738 -22.614 101.854 1.00 34.85 C
ATOM 12 O2' U B 47 49.799 -22.135 101.048 1.00 34.70 O
ATOM 13 C1' U B 47 48.134 -23.844 101.199 1.00 34.77 C
ATOM 14 N1 U B 47 46.751 -24.042 101.612 1.00 34.80 N
ATOM 15 C2 U B 47 45.852 -23.166 101.051 1.00 34.56 C
ATOM 16 O2 U B 47 46.257 -22.348 100.272 1.00 34.34 O
ATOM 17 N3 U B 47 44.495 -23.248 101.352 1.00 34.58 N
ATOM 18 C4 U B 47 44.005 -24.159 102.195 1.00 34.82 C
ATOM 19 O4 U B 47 42.834 -24.077 102.365 1.00 34.81 O
ATOM 20 C5 U B 47 44.958 -25.063 102.759 1.00 35.07 C
ATOM 21 C6 U B 47 46.282 -24.988 102.478 1.00 35.06 C
ATOM 22 P A B 48 49.855 -21.318 104.753 1.00 38.76 P
ATOM 23 OP1 A B 48 51.073 -20.873 105.456 1.00 38.99 O
ATOM 24 OP2 A B 48 48.762 -21.891 105.572 1.00 38.94 O
ATOM 25 O5' A B 48 49.266 -20.172 103.811 1.00 38.42 O
TER
Atoms:
OP1: (49.427,-30.470,100.206)
OP2: (47.432,-31.766,99.594)
C3': (46.864,-28.928,104.750)
C1': (44.983,-30.421,104.779)
C5': (48.085,-30.353,103.028)
O4': (45.879,-30.804,103.790)
C8: (45.845,-32.495,105.726)
O2': (44.573,-28.076,104.827)
C6: (44.036,-33.380,108.501)
C5: (44.668,-32.879,107.371)
C4: (44.204,-31.717,106.821)
P: (48.022,-30.810,100.433)
C4': (46.807,-29.759,103.505)
C2': (45.445,-29.074,105.331)
C2: (42.670,-31.526,108.278)
N1: (43.022,-32.633,108.910)
N3: (43.200,-30.965,107.208)
N6: (44.368,-34.512,109.183)
N7: (45.723,-33.365,106.665)
N9: (44.979,-31.482,105.773)
O5': (47.832,-31.245,101.960)
O3': (47.195,-27.607,104.419)
OP2: (47.432,-31.766,99.594)
C3': (46.864,-28.928,104.750)
C1': (44.983,-30.421,104.779)
C5': (48.085,-30.353,103.028)
O4': (45.879,-30.804,103.790)
C8: (45.845,-32.495,105.726)
O2': (44.573,-28.076,104.827)
C6: (44.036,-33.380,108.501)
C5: (44.668,-32.879,107.371)
C4: (44.204,-31.717,106.821)
P: (48.022,-30.810,100.433)
C4': (46.807,-29.759,103.505)
C2': (45.445,-29.074,105.331)
C2: (42.670,-31.526,108.278)
N1: (43.022,-32.633,108.910)
N3: (43.200,-30.965,107.208)
N6: (44.368,-34.512,109.183)
N7: (45.723,-33.365,106.665)
N9: (44.979,-31.482,105.773)
O5': (47.832,-31.245,101.960)
O3': (47.195,-27.607,104.419)
C4: (44.005,-24.159,102.195)
N3: (44.495,-23.248,101.352)
OP1: (48.994,-27.391,106.082)
OP2: (46.820,-26.096,106.303)
C2: (45.852,-23.166,101.051)
C1': (48.134,-23.844,101.199)
C3': (49.283,-23.202,103.128)
O5': (48.439,-25.493,104.518)
O4': (48.877,-24.960,101.630)
C5': (49.660,-25.634,103.808)
P: (47.880,-26.637,105.452)
C4': (49.761,-24.591,102.725)
C2': (48.738,-22.614,101.854)
O2': (49.799,-22.135,101.048)
N1: (46.751,-24.042,101.612)
O4: (42.834,-24.077,102.365)
O2: (46.257,-22.348,100.272)
C6: (46.282,-24.988,102.478)
C5: (44.958,-25.063,102.759)
O3': (50.277,-22.421,103.706)
N3: (44.495,-23.248,101.352)
OP1: (48.994,-27.391,106.082)
OP2: (46.820,-26.096,106.303)
C2: (45.852,-23.166,101.051)
C1': (48.134,-23.844,101.199)
C3': (49.283,-23.202,103.128)
O5': (48.439,-25.493,104.518)
O4': (48.877,-24.960,101.630)
C5': (49.660,-25.634,103.808)
P: (47.880,-26.637,105.452)
C4': (49.761,-24.591,102.725)
C2': (48.738,-22.614,101.854)
O2': (49.799,-22.135,101.048)
N1: (46.751,-24.042,101.612)
O4: (42.834,-24.077,102.365)
O2: (46.257,-22.348,100.272)
C6: (46.282,-24.988,102.478)
C5: (44.958,-25.063,102.759)
O3': (50.277,-22.421,103.706)
Image (generated by PyMOL):