ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GTR:B42:B7

Extra

PDB:
ATOM 1 O3' C A 41 14.642 15.473 34.471 1.00 58.92 O
ATOM 2 P A A 42 13.495 16.618 34.745 1.00 60.26 P
ATOM 3 OP1 A A 42 13.436 16.146 36.152 1.00 59.83 O
ATOM 4 OP2 A A 42 12.260 17.108 34.084 1.00 59.22 O
ATOM 5 O5' A A 42 14.587 17.794 34.622 1.00 59.68 O
ATOM 6 C5' A A 42 15.159 18.400 35.781 1.00 58.36 C
ATOM 7 C4' A A 42 15.260 19.907 35.604 1.00 56.74 C
ATOM 8 O4' A A 42 15.954 20.205 34.393 1.00 54.84 O
ATOM 9 C3' A A 42 13.911 20.556 35.348 1.00 57.06 C
ATOM 10 O3' A A 42 13.127 20.712 36.573 1.00 60.02 O
ATOM 11 C2' A A 42 14.285 21.895 34.726 1.00 55.30 C
ATOM 12 O2' A A 42 14.460 22.936 35.692 1.00 55.78 O
ATOM 13 C1' A A 42 15.680 21.588 34.165 1.00 52.74 C
ATOM 14 N9 A A 42 15.804 21.862 32.714 1.00 48.89 N
ATOM 15 C8 A A 42 14.875 21.789 31.706 1.00 47.17 C
ATOM 16 N7 A A 42 15.336 22.142 30.538 1.00 45.57 N
ATOM 17 C5 A A 42 16.663 22.470 30.786 1.00 44.83 C
ATOM 18 C6 A A 42 17.699 22.925 29.958 1.00 43.16 C
ATOM 19 N6 A A 42 17.555 23.151 28.655 1.00 41.86 N
ATOM 20 N1 A A 42 18.884 23.149 30.536 1.00 43.35 N
ATOM 21 C2 A A 42 19.024 22.938 31.837 1.00 43.63 C
ATOM 22 N3 A A 42 18.139 22.518 32.720 1.00 44.25 N
ATOM 23 C4 A A 42 16.956 22.299 32.110 1.00 45.55 C
ATOM 24 P U A 43 13.598 21.175 38.076 1.00 63.34 P
ATOM 25 OP1 U A 43 14.767 21.988 38.484 1.00 61.81 O
ATOM 26 OP2 U A 43 13.296 19.921 38.809 1.00 63.15 O
ATOM 27 O5' U A 43 12.278 22.117 38.105 1.00 63.65 O
TER

ATOM 1 O3' U B 6 22.200 24.989 33.430 1.00 30.31 O
ATOM 2 P C B 7 23.135 23.744 33.020 1.00 34.29 P
ATOM 3 OP1 C B 7 24.024 24.098 34.154 1.00 34.73 O
ATOM 4 OP2 C B 7 23.674 23.697 31.639 1.00 34.17 O
ATOM 5 O5' C B 7 22.449 22.329 33.344 1.00 35.19 O
ATOM 6 C5' C B 7 22.219 21.927 34.700 1.00 35.69 C
ATOM 7 C4' C B 7 21.743 20.480 34.834 1.00 36.08 C
ATOM 8 O4' C B 7 20.571 20.284 34.023 1.00 36.79 O
ATOM 9 C3' C B 7 22.799 19.478 34.358 1.00 36.00 C
ATOM 10 O3' C B 7 22.666 18.304 35.161 1.00 33.87 O
ATOM 11 C2' C B 7 22.345 19.235 32.935 1.00 36.72 C
ATOM 12 O2' C B 7 22.798 17.965 32.457 1.00 37.06 O
ATOM 13 C1' C B 7 20.835 19.223 33.099 1.00 37.59 C
ATOM 14 N1 C B 7 20.089 19.481 31.827 1.00 38.53 N
ATOM 15 C2 C B 7 18.725 19.185 31.816 1.00 39.80 C
ATOM 16 O2 C B 7 18.136 18.795 32.829 1.00 40.14 O
ATOM 17 N3 C B 7 18.046 19.355 30.649 1.00 40.02 N
ATOM 18 C4 C B 7 18.653 19.796 29.541 1.00 39.38 C
ATOM 19 N4 C B 7 17.940 19.938 28.426 1.00 39.57 N
ATOM 20 C5 C B 7 20.044 20.112 29.535 1.00 38.90 C
ATOM 21 C6 C B 7 20.711 19.939 30.694 1.00 38.67 C
ATOM 22 P G B 8 23.372 18.228 36.604 1.00 32.05 P
ATOM 23 OP1 G B 8 22.721 17.172 37.415 1.00 33.68 O
ATOM 24 OP2 G B 8 23.634 19.558 37.201 1.00 31.98 O
ATOM 25 O5' G B 8 24.759 17.634 36.091 1.00 29.06 O
TER

Atoms:
OP1: (13.436,16.146,36.152)
OP2: (12.260,17.108,34.084)
C3': (13.911,20.556,35.348)
C1': (15.680,21.588,34.165)
C5': (15.159,18.400,35.781)
O4': (15.954,20.205,34.393)
C8: (14.875,21.789,31.706)
O2': (14.460,22.936,35.692)
C6: (17.699,22.925,29.958)
C5: (16.663,22.470,30.786)
C4: (16.956,22.299,32.110)
P: (13.495,16.618,34.745)
C4': (15.260,19.907,35.604)
C2': (14.285,21.895,34.726)
C2: (19.024,22.938,31.837)
N1: (18.884,23.149,30.536)
N3: (18.139,22.518,32.720)
N6: (17.555,23.151,28.655)
N7: (15.336,22.142,30.538)
N9: (15.804,21.862,32.714)
O5': (14.587,17.794,34.622)
O3': (13.127,20.712,36.573)
C2: (18.725,19.185,31.816)
OP1: (24.024,24.098,34.154)
OP2: (23.674,23.697,31.639)
C4: (18.653,19.796,29.541)
O5': (22.449,22.329,33.344)
C3': (22.799,19.478,34.358)
C1': (20.835,19.223,33.099)
O4': (20.571,20.284,34.023)
C5': (22.219,21.927,34.700)
P: (23.135,23.744,33.020)
O2: (18.136,18.795,32.829)
C4': (21.743,20.480,34.834)
C2': (22.345,19.235,32.935)
O2': (22.798,17.965,32.457)
N1: (20.089,19.481,31.827)
N3: (18.046,19.355,30.649)
N4: (17.940,19.938,28.426)
C6: (20.711,19.939,30.694)
C5: (20.044,20.112,29.535)
O3': (22.666,18.304,35.161)
Image (generated by PyMOL):
PyMOL image
show in jmol