Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D19:C21
Extra
PDB:
ATOM 1 O3' G A 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 2 P A A 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 3 OP1 A A 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 4 OP2 A A 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 5 O5' A A 19 8.605 -2.308 32.390 1.00 17.52 O
ATOM 6 C5' A A 19 9.157 -1.019 32.155 1.00 14.73 C
ATOM 7 C4' A A 19 10.540 -1.181 31.567 1.00 15.40 C
ATOM 8 O4' A A 19 11.315 -2.021 32.469 1.00 15.42 O
ATOM 9 C3' A A 19 10.591 -1.944 30.252 1.00 16.26 C
ATOM 10 O3' A A 19 10.346 -1.087 29.140 1.00 17.27 O
ATOM 11 C2' A A 19 12.009 -2.509 30.255 1.00 13.99 C
ATOM 12 O2' A A 19 12.997 -1.565 29.901 1.00 14.71 O
ATOM 13 C1' A A 19 12.172 -2.877 31.727 1.00 12.08 C
ATOM 14 N9 A A 19 11.797 -4.262 32.010 1.00 8.63 N
ATOM 15 C8 A A 19 10.762 -4.710 32.787 1.00 6.21 C
ATOM 16 N7 A A 19 10.659 -6.016 32.824 1.00 6.23 N
ATOM 17 C5 A A 19 11.701 -6.458 32.020 1.00 5.71 C
ATOM 18 C6 A A 19 12.128 -7.745 31.644 1.00 6.89 C
ATOM 19 N6 A A 19 11.519 -8.868 32.032 1.00 8.38 N
ATOM 20 N1 A A 19 13.211 -7.839 30.840 1.00 5.98 N
ATOM 21 C2 A A 19 13.806 -6.712 30.440 1.00 5.64 C
ATOM 22 N3 A A 19 13.492 -5.446 30.720 1.00 5.19 N
ATOM 23 C4 A A 19 12.418 -5.389 31.523 1.00 5.14 C
ATOM 24 P A A 20 9.579 -1.656 27.853 1.00 17.96 P
ATOM 25 OP1 A A 20 9.663 -0.644 26.771 1.00 18.68 O
ATOM 26 OP2 A A 20 8.267 -2.161 28.287 1.00 18.82 O
ATOM 27 O5' A A 20 10.424 -2.925 27.407 1.00 17.09 O
TER
ATOM 1 O3' A B 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 2 P C B 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 3 OP1 C B 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 4 OP2 C B 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 5 O5' C B 21 18.526 -7.443 29.496 1.00 19.40 O
ATOM 6 C5' C B 21 17.778 -8.595 29.826 1.00 19.64 C
ATOM 7 C4' C B 21 18.364 -9.786 29.125 1.00 19.09 C
ATOM 8 O4' C B 21 18.170 -9.644 27.687 1.00 19.15 O
ATOM 9 C3' C B 21 19.868 -9.911 29.267 1.00 19.18 C
ATOM 10 O3' C B 21 20.234 -10.531 30.487 1.00 22.88 O
ATOM 11 C2' C B 21 20.214 -10.783 28.071 1.00 20.63 C
ATOM 12 O2' C B 21 19.952 -12.157 28.298 1.00 20.98 O
ATOM 13 C1' C B 21 19.281 -10.202 27.003 1.00 17.62 C
ATOM 14 N1 C B 21 19.956 -9.131 26.261 1.00 16.66 N
ATOM 15 C2 C B 21 20.772 -9.481 25.180 1.00 15.98 C
ATOM 16 O2 C B 21 20.865 -10.677 24.863 1.00 17.73 O
ATOM 17 N3 C B 21 21.438 -8.514 24.510 1.00 14.65 N
ATOM 18 C4 C B 21 21.311 -7.241 24.880 1.00 14.23 C
ATOM 19 N4 C B 21 21.993 -6.331 24.195 1.00 15.81 N
ATOM 20 C5 C B 21 20.475 -6.850 25.973 1.00 15.00 C
ATOM 21 C6 C B 21 19.819 -7.820 26.627 1.00 15.11 C
ATOM 22 P U B 22 21.717 -10.323 31.074 1.00 23.65 P
ATOM 23 OP1 U B 22 21.897 -11.265 32.206 1.00 28.09 O
ATOM 24 OP2 U B 22 21.924 -8.872 31.289 1.00 24.13 O
ATOM 25 O5' U B 22 22.697 -10.782 29.908 1.00 24.35 O
TER
ATOM 2 P A A 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 3 OP1 A A 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 4 OP2 A A 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 5 O5' A A 19 8.605 -2.308 32.390 1.00 17.52 O
ATOM 6 C5' A A 19 9.157 -1.019 32.155 1.00 14.73 C
ATOM 7 C4' A A 19 10.540 -1.181 31.567 1.00 15.40 C
ATOM 8 O4' A A 19 11.315 -2.021 32.469 1.00 15.42 O
ATOM 9 C3' A A 19 10.591 -1.944 30.252 1.00 16.26 C
ATOM 10 O3' A A 19 10.346 -1.087 29.140 1.00 17.27 O
ATOM 11 C2' A A 19 12.009 -2.509 30.255 1.00 13.99 C
ATOM 12 O2' A A 19 12.997 -1.565 29.901 1.00 14.71 O
ATOM 13 C1' A A 19 12.172 -2.877 31.727 1.00 12.08 C
ATOM 14 N9 A A 19 11.797 -4.262 32.010 1.00 8.63 N
ATOM 15 C8 A A 19 10.762 -4.710 32.787 1.00 6.21 C
ATOM 16 N7 A A 19 10.659 -6.016 32.824 1.00 6.23 N
ATOM 17 C5 A A 19 11.701 -6.458 32.020 1.00 5.71 C
ATOM 18 C6 A A 19 12.128 -7.745 31.644 1.00 6.89 C
ATOM 19 N6 A A 19 11.519 -8.868 32.032 1.00 8.38 N
ATOM 20 N1 A A 19 13.211 -7.839 30.840 1.00 5.98 N
ATOM 21 C2 A A 19 13.806 -6.712 30.440 1.00 5.64 C
ATOM 22 N3 A A 19 13.492 -5.446 30.720 1.00 5.19 N
ATOM 23 C4 A A 19 12.418 -5.389 31.523 1.00 5.14 C
ATOM 24 P A A 20 9.579 -1.656 27.853 1.00 17.96 P
ATOM 25 OP1 A A 20 9.663 -0.644 26.771 1.00 18.68 O
ATOM 26 OP2 A A 20 8.267 -2.161 28.287 1.00 18.82 O
ATOM 27 O5' A A 20 10.424 -2.925 27.407 1.00 17.09 O
TER
ATOM 1 O3' A B 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 2 P C B 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 3 OP1 C B 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 4 OP2 C B 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 5 O5' C B 21 18.526 -7.443 29.496 1.00 19.40 O
ATOM 6 C5' C B 21 17.778 -8.595 29.826 1.00 19.64 C
ATOM 7 C4' C B 21 18.364 -9.786 29.125 1.00 19.09 C
ATOM 8 O4' C B 21 18.170 -9.644 27.687 1.00 19.15 O
ATOM 9 C3' C B 21 19.868 -9.911 29.267 1.00 19.18 C
ATOM 10 O3' C B 21 20.234 -10.531 30.487 1.00 22.88 O
ATOM 11 C2' C B 21 20.214 -10.783 28.071 1.00 20.63 C
ATOM 12 O2' C B 21 19.952 -12.157 28.298 1.00 20.98 O
ATOM 13 C1' C B 21 19.281 -10.202 27.003 1.00 17.62 C
ATOM 14 N1 C B 21 19.956 -9.131 26.261 1.00 16.66 N
ATOM 15 C2 C B 21 20.772 -9.481 25.180 1.00 15.98 C
ATOM 16 O2 C B 21 20.865 -10.677 24.863 1.00 17.73 O
ATOM 17 N3 C B 21 21.438 -8.514 24.510 1.00 14.65 N
ATOM 18 C4 C B 21 21.311 -7.241 24.880 1.00 14.23 C
ATOM 19 N4 C B 21 21.993 -6.331 24.195 1.00 15.81 N
ATOM 20 C5 C B 21 20.475 -6.850 25.973 1.00 15.00 C
ATOM 21 C6 C B 21 19.819 -7.820 26.627 1.00 15.11 C
ATOM 22 P U B 22 21.717 -10.323 31.074 1.00 23.65 P
ATOM 23 OP1 U B 22 21.897 -11.265 32.206 1.00 28.09 O
ATOM 24 OP2 U B 22 21.924 -8.872 31.289 1.00 24.13 O
ATOM 25 O5' U B 22 22.697 -10.782 29.908 1.00 24.35 O
TER
Atoms:
OP1: (7.094,-2.533,34.378)
OP2: (6.181,-1.666,32.145)
C3': (10.591,-1.944,30.252)
C1': (12.172,-2.877,31.727)
C5': (9.157,-1.019,32.155)
O4': (11.315,-2.021,32.469)
C8: (10.762,-4.710,32.787)
O2': (12.997,-1.565,29.901)
C6: (12.128,-7.745,31.644)
C5: (11.701,-6.458,32.020)
C4: (12.418,-5.389,31.523)
P: (7.114,-2.546,32.898)
C4': (10.540,-1.181,31.567)
C2': (12.009,-2.509,30.255)
C2: (13.806,-6.712,30.440)
N1: (13.211,-7.839,30.840)
N3: (13.492,-5.446,30.720)
N6: (11.519,-8.868,32.032)
N7: (10.659,-6.016,32.824)
N9: (11.797,-4.262,32.010)
O5': (8.605,-2.308,32.390)
O3': (10.346,-1.087,29.140)
OP2: (6.181,-1.666,32.145)
C3': (10.591,-1.944,30.252)
C1': (12.172,-2.877,31.727)
C5': (9.157,-1.019,32.155)
O4': (11.315,-2.021,32.469)
C8: (10.762,-4.710,32.787)
O2': (12.997,-1.565,29.901)
C6: (12.128,-7.745,31.644)
C5: (11.701,-6.458,32.020)
C4: (12.418,-5.389,31.523)
P: (7.114,-2.546,32.898)
C4': (10.540,-1.181,31.567)
C2': (12.009,-2.509,30.255)
C2: (13.806,-6.712,30.440)
N1: (13.211,-7.839,30.840)
N3: (13.492,-5.446,30.720)
N6: (11.519,-8.868,32.032)
N7: (10.659,-6.016,32.824)
N9: (11.797,-4.262,32.010)
O5': (8.605,-2.308,32.390)
O3': (10.346,-1.087,29.140)
C2: (20.772,-9.481,25.180)
OP1: (17.638,-6.118,31.382)
OP2: (19.090,-5.020,29.583)
C4: (21.311,-7.241,24.880)
O5': (18.526,-7.443,29.496)
C3': (19.868,-9.911,29.267)
C1': (19.281,-10.202,27.003)
O4': (18.170,-9.644,27.687)
C5': (17.778,-8.595,29.826)
P: (18.058,-6.006,29.969)
O2: (20.865,-10.677,24.863)
C4': (18.364,-9.786,29.125)
C2': (20.214,-10.783,28.071)
O2': (19.952,-12.157,28.298)
N1: (19.956,-9.131,26.261)
N3: (21.438,-8.514,24.510)
N4: (21.993,-6.331,24.195)
C6: (19.819,-7.820,26.627)
C5: (20.475,-6.850,25.973)
O3': (20.234,-10.531,30.487)
OP1: (17.638,-6.118,31.382)
OP2: (19.090,-5.020,29.583)
C4: (21.311,-7.241,24.880)
O5': (18.526,-7.443,29.496)
C3': (19.868,-9.911,29.267)
C1': (19.281,-10.202,27.003)
O4': (18.170,-9.644,27.687)
C5': (17.778,-8.595,29.826)
P: (18.058,-6.006,29.969)
O2: (20.865,-10.677,24.863)
C4': (18.364,-9.786,29.125)
C2': (20.214,-10.783,28.071)
O2': (19.952,-12.157,28.298)
N1: (19.956,-9.131,26.261)
N3: (21.438,-8.514,24.510)
N4: (21.993,-6.331,24.195)
C6: (19.819,-7.820,26.627)
C5: (20.475,-6.850,25.973)
O3': (20.234,-10.531,30.487)
Image (generated by PyMOL):