Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0900:0902
Extra
PDB:
ATOM 1 O3' A A 899 40.692 89.600 84.550 1.00 27.97 O
ATOM 2 P A A 900 41.704 89.346 85.764 1.00 30.11 P
ATOM 3 OP1 A A 900 41.762 87.886 86.009 1.00 28.29 O
ATOM 4 OP2 A A 900 41.339 90.268 86.872 1.00 30.17 O
ATOM 5 O5' A A 900 43.115 89.809 85.193 1.00 30.21 O
ATOM 6 C5' A A 900 43.655 89.230 83.997 1.00 30.38 C
ATOM 7 C4' A A 900 44.877 90.000 83.554 1.00 31.57 C
ATOM 8 O4' A A 900 44.496 91.322 83.077 1.00 33.88 O
ATOM 9 C3' A A 900 45.865 90.303 84.660 1.00 30.74 C
ATOM 10 O3' A A 900 46.673 89.192 84.977 1.00 28.94 O
ATOM 11 C2' A A 900 46.628 91.486 84.087 1.00 30.74 C
ATOM 12 O2' A A 900 47.537 91.090 83.080 1.00 30.94 O
ATOM 13 C1' A A 900 45.485 92.274 83.451 1.00 30.47 C
ATOM 14 N9 A A 900 44.864 93.203 84.391 1.00 29.82 N
ATOM 15 C8 A A 900 43.723 92.990 85.125 1.00 32.16 C
ATOM 16 N7 A A 900 43.385 94.001 85.886 1.00 32.89 N
ATOM 17 C5 A A 900 44.369 94.945 85.640 1.00 30.45 C
ATOM 18 C6 A A 900 44.569 96.236 86.131 1.00 29.44 C
ATOM 19 N6 A A 900 43.751 96.823 87.006 1.00 31.05 N
ATOM 20 N1 A A 900 45.649 96.918 85.689 1.00 28.27 N
ATOM 21 C2 A A 900 46.462 96.327 84.809 1.00 29.41 C
ATOM 22 N3 A A 900 46.377 95.115 84.265 1.00 31.75 N
ATOM 23 C4 A A 900 45.292 94.466 84.726 1.00 31.75 C
ATOM 24 P A A 901 47.281 89.072 86.448 1.00 27.53 P
ATOM 25 OP1 A A 901 47.868 87.715 86.557 1.00 26.52 O
ATOM 26 OP2 A A 901 46.260 89.505 87.421 1.00 26.62 O
ATOM 27 O5' A A 901 48.416 90.190 86.436 1.00 30.04 O
TER
ATOM 1 O3' A B 901 51.426 92.461 88.648 1.00 29.02 O
ATOM 2 P C B 902 51.824 91.570 89.926 1.00 27.44 P
ATOM 3 OP1 C B 902 50.777 91.753 90.960 1.00 29.59 O
ATOM 4 OP2 C B 902 53.247 91.855 90.264 1.00 31.77 O
ATOM 5 O5' C B 902 51.709 90.071 89.402 1.00 27.07 O
ATOM 6 C5' C B 902 52.709 89.497 88.545 1.00 25.07 C
ATOM 7 C4' C B 902 52.245 88.155 88.027 1.00 24.82 C
ATOM 8 O4' C B 902 51.040 88.323 87.236 1.00 24.46 O
ATOM 9 C3' C B 902 53.211 87.464 87.083 1.00 25.98 C
ATOM 10 O3' C B 902 54.187 86.737 87.826 1.00 29.56 O
ATOM 11 C2' C B 902 52.299 86.540 86.293 1.00 24.57 C
ATOM 12 O2' C B 902 51.968 85.380 87.015 1.00 28.19 O
ATOM 13 C1' C B 902 51.034 87.386 86.171 1.00 23.62 C
ATOM 14 N1 C B 902 50.885 88.099 84.884 1.00 26.35 N
ATOM 15 C2 C B 902 50.834 87.349 83.696 1.00 27.95 C
ATOM 16 O2 C B 902 50.943 86.113 83.753 1.00 29.25 O
ATOM 17 N3 C B 902 50.668 87.989 82.518 1.00 28.08 N
ATOM 18 C4 C B 902 50.553 89.318 82.488 1.00 28.01 C
ATOM 19 N4 C B 902 50.369 89.899 81.300 1.00 28.25 N
ATOM 20 C5 C B 902 50.617 90.107 83.673 1.00 25.32 C
ATOM 21 C6 C B 902 50.783 89.464 84.835 1.00 26.01 C
ATOM 22 P A B 903 55.636 86.471 87.193 1.00 31.71 P
ATOM 23 OP1 A B 903 56.510 85.936 88.261 1.00 31.66 O
ATOM 24 OP2 A B 903 56.038 87.705 86.471 1.00 32.36 O
ATOM 25 O5' A B 903 55.387 85.311 86.129 1.00 31.48 O
TER
ATOM 2 P A A 900 41.704 89.346 85.764 1.00 30.11 P
ATOM 3 OP1 A A 900 41.762 87.886 86.009 1.00 28.29 O
ATOM 4 OP2 A A 900 41.339 90.268 86.872 1.00 30.17 O
ATOM 5 O5' A A 900 43.115 89.809 85.193 1.00 30.21 O
ATOM 6 C5' A A 900 43.655 89.230 83.997 1.00 30.38 C
ATOM 7 C4' A A 900 44.877 90.000 83.554 1.00 31.57 C
ATOM 8 O4' A A 900 44.496 91.322 83.077 1.00 33.88 O
ATOM 9 C3' A A 900 45.865 90.303 84.660 1.00 30.74 C
ATOM 10 O3' A A 900 46.673 89.192 84.977 1.00 28.94 O
ATOM 11 C2' A A 900 46.628 91.486 84.087 1.00 30.74 C
ATOM 12 O2' A A 900 47.537 91.090 83.080 1.00 30.94 O
ATOM 13 C1' A A 900 45.485 92.274 83.451 1.00 30.47 C
ATOM 14 N9 A A 900 44.864 93.203 84.391 1.00 29.82 N
ATOM 15 C8 A A 900 43.723 92.990 85.125 1.00 32.16 C
ATOM 16 N7 A A 900 43.385 94.001 85.886 1.00 32.89 N
ATOM 17 C5 A A 900 44.369 94.945 85.640 1.00 30.45 C
ATOM 18 C6 A A 900 44.569 96.236 86.131 1.00 29.44 C
ATOM 19 N6 A A 900 43.751 96.823 87.006 1.00 31.05 N
ATOM 20 N1 A A 900 45.649 96.918 85.689 1.00 28.27 N
ATOM 21 C2 A A 900 46.462 96.327 84.809 1.00 29.41 C
ATOM 22 N3 A A 900 46.377 95.115 84.265 1.00 31.75 N
ATOM 23 C4 A A 900 45.292 94.466 84.726 1.00 31.75 C
ATOM 24 P A A 901 47.281 89.072 86.448 1.00 27.53 P
ATOM 25 OP1 A A 901 47.868 87.715 86.557 1.00 26.52 O
ATOM 26 OP2 A A 901 46.260 89.505 87.421 1.00 26.62 O
ATOM 27 O5' A A 901 48.416 90.190 86.436 1.00 30.04 O
TER
ATOM 1 O3' A B 901 51.426 92.461 88.648 1.00 29.02 O
ATOM 2 P C B 902 51.824 91.570 89.926 1.00 27.44 P
ATOM 3 OP1 C B 902 50.777 91.753 90.960 1.00 29.59 O
ATOM 4 OP2 C B 902 53.247 91.855 90.264 1.00 31.77 O
ATOM 5 O5' C B 902 51.709 90.071 89.402 1.00 27.07 O
ATOM 6 C5' C B 902 52.709 89.497 88.545 1.00 25.07 C
ATOM 7 C4' C B 902 52.245 88.155 88.027 1.00 24.82 C
ATOM 8 O4' C B 902 51.040 88.323 87.236 1.00 24.46 O
ATOM 9 C3' C B 902 53.211 87.464 87.083 1.00 25.98 C
ATOM 10 O3' C B 902 54.187 86.737 87.826 1.00 29.56 O
ATOM 11 C2' C B 902 52.299 86.540 86.293 1.00 24.57 C
ATOM 12 O2' C B 902 51.968 85.380 87.015 1.00 28.19 O
ATOM 13 C1' C B 902 51.034 87.386 86.171 1.00 23.62 C
ATOM 14 N1 C B 902 50.885 88.099 84.884 1.00 26.35 N
ATOM 15 C2 C B 902 50.834 87.349 83.696 1.00 27.95 C
ATOM 16 O2 C B 902 50.943 86.113 83.753 1.00 29.25 O
ATOM 17 N3 C B 902 50.668 87.989 82.518 1.00 28.08 N
ATOM 18 C4 C B 902 50.553 89.318 82.488 1.00 28.01 C
ATOM 19 N4 C B 902 50.369 89.899 81.300 1.00 28.25 N
ATOM 20 C5 C B 902 50.617 90.107 83.673 1.00 25.32 C
ATOM 21 C6 C B 902 50.783 89.464 84.835 1.00 26.01 C
ATOM 22 P A B 903 55.636 86.471 87.193 1.00 31.71 P
ATOM 23 OP1 A B 903 56.510 85.936 88.261 1.00 31.66 O
ATOM 24 OP2 A B 903 56.038 87.705 86.471 1.00 32.36 O
ATOM 25 O5' A B 903 55.387 85.311 86.129 1.00 31.48 O
TER
Atoms:
OP1: (41.762,87.886,86.009)
OP2: (41.339,90.268,86.872)
C3': (45.865,90.303,84.660)
C1': (45.485,92.274,83.451)
C5': (43.655,89.230,83.997)
O4': (44.496,91.322,83.077)
C8: (43.723,92.990,85.125)
O2': (47.537,91.090,83.080)
C6: (44.569,96.236,86.131)
C5: (44.369,94.945,85.640)
C4: (45.292,94.466,84.726)
P: (41.704,89.346,85.764)
C4': (44.877,90.000,83.554)
C2': (46.628,91.486,84.087)
C2: (46.462,96.327,84.809)
N1: (45.649,96.918,85.689)
N3: (46.377,95.115,84.265)
N6: (43.751,96.823,87.006)
N7: (43.385,94.001,85.886)
N9: (44.864,93.203,84.391)
O5': (43.115,89.809,85.193)
O3': (46.673,89.192,84.977)
OP2: (41.339,90.268,86.872)
C3': (45.865,90.303,84.660)
C1': (45.485,92.274,83.451)
C5': (43.655,89.230,83.997)
O4': (44.496,91.322,83.077)
C8: (43.723,92.990,85.125)
O2': (47.537,91.090,83.080)
C6: (44.569,96.236,86.131)
C5: (44.369,94.945,85.640)
C4: (45.292,94.466,84.726)
P: (41.704,89.346,85.764)
C4': (44.877,90.000,83.554)
C2': (46.628,91.486,84.087)
C2: (46.462,96.327,84.809)
N1: (45.649,96.918,85.689)
N3: (46.377,95.115,84.265)
N6: (43.751,96.823,87.006)
N7: (43.385,94.001,85.886)
N9: (44.864,93.203,84.391)
O5': (43.115,89.809,85.193)
O3': (46.673,89.192,84.977)
C2: (50.834,87.349,83.696)
OP1: (50.777,91.753,90.960)
OP2: (53.247,91.855,90.264)
C4: (50.553,89.318,82.488)
O5': (51.709,90.071,89.402)
C3': (53.211,87.464,87.083)
C1': (51.034,87.386,86.171)
O4': (51.040,88.323,87.236)
C5': (52.709,89.497,88.545)
P: (51.824,91.570,89.926)
O2: (50.943,86.113,83.753)
C4': (52.245,88.155,88.027)
C2': (52.299,86.540,86.293)
O2': (51.968,85.380,87.015)
N1: (50.885,88.099,84.884)
N3: (50.668,87.989,82.518)
N4: (50.369,89.899,81.300)
C6: (50.783,89.464,84.835)
C5: (50.617,90.107,83.673)
O3': (54.187,86.737,87.826)
OP1: (50.777,91.753,90.960)
OP2: (53.247,91.855,90.264)
C4: (50.553,89.318,82.488)
O5': (51.709,90.071,89.402)
C3': (53.211,87.464,87.083)
C1': (51.034,87.386,86.171)
O4': (51.040,88.323,87.236)
C5': (52.709,89.497,88.545)
P: (51.824,91.570,89.926)
O2: (50.943,86.113,83.753)
C4': (52.245,88.155,88.027)
C2': (52.299,86.540,86.293)
O2': (51.968,85.380,87.015)
N1: (50.885,88.099,84.884)
N3: (50.668,87.989,82.518)
N4: (50.369,89.899,81.300)
C6: (50.783,89.464,84.835)
C5: (50.617,90.107,83.673)
O3': (54.187,86.737,87.826)
Image (generated by PyMOL):