ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52393:51087

Extra

PDB:
ATOM 1 O3' G A2392 134.832 -38.296 258.993 1.00 39.40 O
ATOM 2 P A A2393 136.065 -37.317 258.841 1.00 38.32 P
ATOM 3 OP1 A A2393 137.123 -38.079 258.157 1.00 38.41 O
ATOM 4 OP2 A A2393 136.352 -36.767 260.195 1.00 38.21 O
ATOM 5 O5' A A2393 135.479 -36.156 257.863 1.00 38.08 O
ATOM 6 C5' A A2393 134.828 -36.465 256.626 1.00 38.18 C
ATOM 7 C4' A A2393 134.147 -35.257 256.051 1.00 37.96 C
ATOM 8 O4' A A2393 133.031 -34.893 256.893 1.00 37.98 O
ATOM 9 C3' A A2393 134.973 -34.003 255.994 1.00 37.62 C
ATOM 10 O3' A A2393 135.818 -33.933 254.867 1.00 37.54 O
ATOM 11 C2' A A2393 133.938 -32.875 256.087 1.00 37.46 C
ATOM 12 O2' A A2393 133.348 -32.590 254.836 1.00 37.44 O
ATOM 13 C1' A A2393 132.898 -33.500 256.982 1.00 37.69 C
ATOM 14 N9 A A2393 133.107 -33.150 258.367 1.00 37.62 N
ATOM 15 C8 A A2393 133.768 -33.937 259.256 1.00 37.75 C
ATOM 16 N7 A A2393 133.859 -33.415 260.457 1.00 37.67 N
ATOM 17 C5 A A2393 133.169 -32.213 260.308 1.00 37.47 C
ATOM 18 C6 A A2393 132.882 -31.192 261.184 1.00 37.31 C
ATOM 19 N6 A A2393 133.247 -31.205 262.458 1.00 37.34 N
ATOM 20 N1 A A2393 132.194 -30.140 260.756 1.00 37.15 N
ATOM 21 C2 A A2393 131.846 -30.119 259.495 1.00 37.14 C
ATOM 22 N3 A A2393 132.090 -31.007 258.556 1.00 37.27 N
ATOM 23 C4 A A2393 132.741 -32.043 259.036 1.00 37.43 C
ATOM 24 P U A2394 137.346 -33.451 255.052 1.00 36.62 P
ATOM 25 OP1 U A2394 137.975 -33.557 253.731 1.00 36.61 O
ATOM 26 OP2 U A2394 137.931 -34.199 256.186 1.00 36.75 O
ATOM 27 O5' U A2394 137.214 -31.931 255.462 1.00 36.31 O
TER

ATOM 1 O3' A B1086 130.619 -26.777 259.772 1.00 33.66 O
ATOM 2 P C B1087 129.463 -26.727 258.677 1.00 36.46 P
ATOM 3 OP1 C B1087 129.252 -28.130 258.149 1.00 36.72 O
ATOM 4 OP2 C B1087 129.830 -25.690 257.740 1.00 36.21 O
ATOM 5 O5' C B1087 128.213 -26.269 259.531 1.00 36.53 O
ATOM 6 C5' C B1087 127.550 -27.159 260.386 1.00 36.79 C
ATOM 7 C4' C B1087 126.791 -26.412 261.439 1.00 36.78 C
ATOM 8 O4' C B1087 127.651 -25.414 262.086 1.00 36.54 O
ATOM 9 C3' C B1087 125.664 -25.549 260.963 1.00 36.74 C
ATOM 10 O3' C B1087 124.557 -26.260 260.500 1.00 36.99 O
ATOM 11 C2' C B1087 125.393 -24.686 262.187 1.00 36.68 C
ATOM 12 O2' C B1087 124.747 -25.437 263.169 1.00 36.94 O
ATOM 13 C1' C B1087 126.811 -24.408 262.670 1.00 36.49 C
ATOM 14 N1 C B1087 127.267 -23.076 262.260 1.00 36.20 N
ATOM 15 C2 C B1087 126.816 -21.957 262.982 1.00 36.11 C
ATOM 16 O2 C B1087 126.060 -22.122 263.965 1.00 36.28 O
ATOM 17 N3 C B1087 127.217 -20.709 262.586 1.00 35.85 N
ATOM 18 C4 C B1087 128.031 -20.553 261.517 1.00 35.69 C
ATOM 19 N4 C B1087 128.428 -19.333 261.104 1.00 35.45 N
ATOM 20 C5 C B1087 128.480 -21.695 260.798 1.00 35.79 C
ATOM 21 C6 C B1087 128.098 -22.923 261.196 1.00 36.04 C
ATOM 22 P U B1088 123.768 -25.705 259.211 1.00 34.09 P
ATOM 23 OP1 U B1088 122.824 -26.787 258.761 1.00 34.39 O
ATOM 24 OP2 U B1088 124.776 -25.217 258.273 1.00 33.85 O
ATOM 25 O5' U B1088 122.965 -24.478 259.822 1.00 34.00 O
TER

Atoms:
OP1: (137.123,-38.079,258.157)
OP2: (136.352,-36.767,260.195)
C3': (134.973,-34.003,255.994)
C1': (132.898,-33.500,256.982)
C5': (134.828,-36.465,256.626)
O4': (133.031,-34.893,256.893)
C8: (133.768,-33.937,259.256)
O2': (133.348,-32.590,254.836)
C6: (132.882,-31.192,261.184)
C5: (133.169,-32.213,260.308)
C4: (132.741,-32.043,259.036)
P: (136.065,-37.317,258.841)
C4': (134.147,-35.257,256.051)
C2': (133.938,-32.875,256.087)
C2: (131.846,-30.119,259.495)
N1: (132.194,-30.140,260.756)
N3: (132.090,-31.007,258.556)
N6: (133.247,-31.205,262.458)
N7: (133.859,-33.415,260.457)
N9: (133.107,-33.150,258.367)
O5': (135.479,-36.156,257.863)
O3': (135.818,-33.933,254.867)
C2: (126.816,-21.957,262.982)
OP1: (129.252,-28.130,258.149)
OP2: (129.830,-25.690,257.740)
C4: (128.031,-20.553,261.517)
O5': (128.213,-26.269,259.531)
C3': (125.664,-25.549,260.963)
C1': (126.811,-24.408,262.670)
O4': (127.651,-25.414,262.086)
C5': (127.550,-27.159,260.386)
P: (129.463,-26.727,258.677)
O2: (126.060,-22.122,263.965)
C4': (126.791,-26.412,261.439)
C2': (125.393,-24.686,262.187)
O2': (124.747,-25.437,263.169)
N1: (127.267,-23.076,262.260)
N3: (127.217,-20.709,262.586)
N4: (128.428,-19.333,261.104)
C6: (128.098,-22.923,261.196)
C5: (128.480,-21.695,260.798)
O3': (124.557,-26.260,260.500)
Image (generated by PyMOL):
PyMOL image
show in jmol