Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21116:21117
Extra
PDB:
ATOM 1 O3' A A1115 -47.600 19.393 65.287 1.00 62.28 O
ATOM 2 P C A1116 -49.025 18.960 64.685 1.00 61.35 P
ATOM 3 OP1 C A1116 -49.163 19.634 63.368 1.00 61.69 O
ATOM 4 OP2 C A1116 -50.033 19.224 65.731 1.00 61.46 O
ATOM 5 O5' C A1116 -48.879 17.388 64.492 1.00 61.13 O
ATOM 6 C5' C A1116 -47.738 16.827 63.871 1.00 60.91 C
ATOM 7 C4' C A1116 -47.583 15.378 64.231 1.00 60.64 C
ATOM 8 O4' C A1116 -47.261 15.237 65.640 1.00 60.38 O
ATOM 9 C3' C A1116 -48.820 14.541 64.054 1.00 60.82 C
ATOM 10 O3' C A1116 -49.014 14.164 62.718 1.00 61.01 O
ATOM 11 C2' C A1116 -48.573 13.378 65.010 1.00 60.51 C
ATOM 12 O2' C A1116 -47.640 12.460 64.467 1.00 60.30 O
ATOM 13 C1' C A1116 -47.902 14.098 66.168 1.00 60.31 C
ATOM 14 N1 C A1116 -48.879 14.546 67.171 1.00 60.44 N
ATOM 15 C2 C A1116 -49.379 13.623 68.079 1.00 60.35 C
ATOM 16 O2 C A1116 -48.971 12.453 67.976 1.00 60.17 O
ATOM 17 N3 C A1116 -50.271 14.044 69.018 1.00 60.50 N
ATOM 18 C4 C A1116 -50.651 15.314 69.030 1.00 60.71 C
ATOM 19 N4 C A1116 -51.518 15.712 69.929 1.00 60.87 N
ATOM 20 C5 C A1116 -50.177 16.264 68.108 1.00 60.80 C
ATOM 21 C6 C A1116 -49.299 15.852 67.202 1.00 60.67 C
ATOM 22 P U A1117 -50.437 13.628 62.227 1.00 55.39 P
ATOM 23 OP1 U A1117 -50.266 13.127 60.822 1.00 55.51 O
ATOM 24 OP2 U A1117 -51.413 14.716 62.477 1.00 55.71 O
ATOM 25 O5' U A1117 -50.698 12.409 63.202 1.00 55.16 O
TER
ATOM 1 O3' C B1116 -49.014 14.164 62.718 1.00 61.01 O
ATOM 2 P U B1117 -50.437 13.628 62.227 1.00 55.39 P
ATOM 3 OP1 U B1117 -50.266 13.127 60.822 1.00 55.51 O
ATOM 4 OP2 U B1117 -51.413 14.716 62.477 1.00 55.71 O
ATOM 5 O5' U B1117 -50.698 12.409 63.202 1.00 55.16 O
ATOM 6 C5' U B1117 -50.312 11.120 62.838 1.00 54.99 C
ATOM 7 C4' U B1117 -50.707 10.135 63.880 1.00 54.84 C
ATOM 8 O4' U B1117 -50.464 10.696 65.183 1.00 54.68 O
ATOM 9 C3' U B1117 -52.173 9.753 63.901 1.00 55.13 C
ATOM 10 O3' U B1117 -52.462 8.745 62.971 1.00 55.22 O
ATOM 11 C2' U B1117 -52.386 9.313 65.340 1.00 54.97 C
ATOM 12 O2' U B1117 -51.899 8.001 65.522 1.00 54.74 O
ATOM 13 C1' U B1117 -51.457 10.261 66.088 1.00 54.76 C
ATOM 14 N1 U B1117 -52.144 11.453 66.627 1.00 54.97 N
ATOM 15 C2 U B1117 -52.893 11.357 67.765 1.00 55.03 C
ATOM 16 O2 U B1117 -53.104 10.311 68.319 1.00 54.94 O
ATOM 17 N3 U B1117 -53.412 12.526 68.218 1.00 55.22 N
ATOM 18 C4 U B1117 -53.226 13.761 67.648 1.00 55.36 C
ATOM 19 O4 U B1117 -53.750 14.747 68.146 1.00 55.55 O
ATOM 20 C5 U B1117 -52.411 13.790 66.484 1.00 55.29 C
ATOM 21 C6 U B1117 -51.901 12.657 66.039 1.00 55.10 C
ATOM 22 P U B1118 -53.679 8.900 61.958 1.00 63.27 P
ATOM 23 OP1 U B1118 -53.426 7.937 60.850 1.00 63.27 O
ATOM 24 OP2 U B1118 -53.822 10.343 61.646 1.00 63.51 O
ATOM 25 O5' U B1118 -54.891 8.402 62.834 1.00 63.41 O
TER
ATOM 2 P C A1116 -49.025 18.960 64.685 1.00 61.35 P
ATOM 3 OP1 C A1116 -49.163 19.634 63.368 1.00 61.69 O
ATOM 4 OP2 C A1116 -50.033 19.224 65.731 1.00 61.46 O
ATOM 5 O5' C A1116 -48.879 17.388 64.492 1.00 61.13 O
ATOM 6 C5' C A1116 -47.738 16.827 63.871 1.00 60.91 C
ATOM 7 C4' C A1116 -47.583 15.378 64.231 1.00 60.64 C
ATOM 8 O4' C A1116 -47.261 15.237 65.640 1.00 60.38 O
ATOM 9 C3' C A1116 -48.820 14.541 64.054 1.00 60.82 C
ATOM 10 O3' C A1116 -49.014 14.164 62.718 1.00 61.01 O
ATOM 11 C2' C A1116 -48.573 13.378 65.010 1.00 60.51 C
ATOM 12 O2' C A1116 -47.640 12.460 64.467 1.00 60.30 O
ATOM 13 C1' C A1116 -47.902 14.098 66.168 1.00 60.31 C
ATOM 14 N1 C A1116 -48.879 14.546 67.171 1.00 60.44 N
ATOM 15 C2 C A1116 -49.379 13.623 68.079 1.00 60.35 C
ATOM 16 O2 C A1116 -48.971 12.453 67.976 1.00 60.17 O
ATOM 17 N3 C A1116 -50.271 14.044 69.018 1.00 60.50 N
ATOM 18 C4 C A1116 -50.651 15.314 69.030 1.00 60.71 C
ATOM 19 N4 C A1116 -51.518 15.712 69.929 1.00 60.87 N
ATOM 20 C5 C A1116 -50.177 16.264 68.108 1.00 60.80 C
ATOM 21 C6 C A1116 -49.299 15.852 67.202 1.00 60.67 C
ATOM 22 P U A1117 -50.437 13.628 62.227 1.00 55.39 P
ATOM 23 OP1 U A1117 -50.266 13.127 60.822 1.00 55.51 O
ATOM 24 OP2 U A1117 -51.413 14.716 62.477 1.00 55.71 O
ATOM 25 O5' U A1117 -50.698 12.409 63.202 1.00 55.16 O
TER
ATOM 1 O3' C B1116 -49.014 14.164 62.718 1.00 61.01 O
ATOM 2 P U B1117 -50.437 13.628 62.227 1.00 55.39 P
ATOM 3 OP1 U B1117 -50.266 13.127 60.822 1.00 55.51 O
ATOM 4 OP2 U B1117 -51.413 14.716 62.477 1.00 55.71 O
ATOM 5 O5' U B1117 -50.698 12.409 63.202 1.00 55.16 O
ATOM 6 C5' U B1117 -50.312 11.120 62.838 1.00 54.99 C
ATOM 7 C4' U B1117 -50.707 10.135 63.880 1.00 54.84 C
ATOM 8 O4' U B1117 -50.464 10.696 65.183 1.00 54.68 O
ATOM 9 C3' U B1117 -52.173 9.753 63.901 1.00 55.13 C
ATOM 10 O3' U B1117 -52.462 8.745 62.971 1.00 55.22 O
ATOM 11 C2' U B1117 -52.386 9.313 65.340 1.00 54.97 C
ATOM 12 O2' U B1117 -51.899 8.001 65.522 1.00 54.74 O
ATOM 13 C1' U B1117 -51.457 10.261 66.088 1.00 54.76 C
ATOM 14 N1 U B1117 -52.144 11.453 66.627 1.00 54.97 N
ATOM 15 C2 U B1117 -52.893 11.357 67.765 1.00 55.03 C
ATOM 16 O2 U B1117 -53.104 10.311 68.319 1.00 54.94 O
ATOM 17 N3 U B1117 -53.412 12.526 68.218 1.00 55.22 N
ATOM 18 C4 U B1117 -53.226 13.761 67.648 1.00 55.36 C
ATOM 19 O4 U B1117 -53.750 14.747 68.146 1.00 55.55 O
ATOM 20 C5 U B1117 -52.411 13.790 66.484 1.00 55.29 C
ATOM 21 C6 U B1117 -51.901 12.657 66.039 1.00 55.10 C
ATOM 22 P U B1118 -53.679 8.900 61.958 1.00 63.27 P
ATOM 23 OP1 U B1118 -53.426 7.937 60.850 1.00 63.27 O
ATOM 24 OP2 U B1118 -53.822 10.343 61.646 1.00 63.51 O
ATOM 25 O5' U B1118 -54.891 8.402 62.834 1.00 63.41 O
TER
Atoms:
C2: (-49.379,13.623,68.079)
OP1: (-49.163,19.634,63.368)
OP2: (-50.033,19.224,65.731)
C4: (-50.651,15.314,69.030)
O5': (-48.879,17.388,64.492)
C3': (-48.820,14.541,64.054)
C1': (-47.902,14.098,66.168)
O4': (-47.261,15.237,65.640)
C5': (-47.738,16.827,63.871)
P: (-49.025,18.960,64.685)
O2: (-48.971,12.453,67.976)
C4': (-47.583,15.378,64.231)
C2': (-48.573,13.378,65.010)
O2': (-47.640,12.460,64.467)
N1: (-48.879,14.546,67.171)
N3: (-50.271,14.044,69.018)
N4: (-51.518,15.712,69.929)
C6: (-49.299,15.852,67.202)
C5: (-50.177,16.264,68.108)
O3': (-49.014,14.164,62.718)
OP1: (-49.163,19.634,63.368)
OP2: (-50.033,19.224,65.731)
C4: (-50.651,15.314,69.030)
O5': (-48.879,17.388,64.492)
C3': (-48.820,14.541,64.054)
C1': (-47.902,14.098,66.168)
O4': (-47.261,15.237,65.640)
C5': (-47.738,16.827,63.871)
P: (-49.025,18.960,64.685)
O2: (-48.971,12.453,67.976)
C4': (-47.583,15.378,64.231)
C2': (-48.573,13.378,65.010)
O2': (-47.640,12.460,64.467)
N1: (-48.879,14.546,67.171)
N3: (-50.271,14.044,69.018)
N4: (-51.518,15.712,69.929)
C6: (-49.299,15.852,67.202)
C5: (-50.177,16.264,68.108)
O3': (-49.014,14.164,62.718)
C4: (-53.226,13.761,67.648)
N3: (-53.412,12.526,68.218)
OP1: (-50.266,13.127,60.822)
OP2: (-51.413,14.716,62.477)
C2: (-52.893,11.357,67.765)
C1': (-51.457,10.261,66.088)
C3': (-52.173,9.753,63.901)
O5': (-50.698,12.409,63.202)
O4': (-50.464,10.696,65.183)
C5': (-50.312,11.120,62.838)
P: (-50.437,13.628,62.227)
C4': (-50.707,10.135,63.880)
C2': (-52.386,9.313,65.340)
O2': (-51.899,8.001,65.522)
N1: (-52.144,11.453,66.627)
O4: (-53.750,14.747,68.146)
O2: (-53.104,10.311,68.319)
C6: (-51.901,12.657,66.039)
C5: (-52.411,13.790,66.484)
O3': (-52.462,8.745,62.971)
N3: (-53.412,12.526,68.218)
OP1: (-50.266,13.127,60.822)
OP2: (-51.413,14.716,62.477)
C2: (-52.893,11.357,67.765)
C1': (-51.457,10.261,66.088)
C3': (-52.173,9.753,63.901)
O5': (-50.698,12.409,63.202)
O4': (-50.464,10.696,65.183)
C5': (-50.312,11.120,62.838)
P: (-50.437,13.628,62.227)
C4': (-50.707,10.135,63.880)
C2': (-52.386,9.313,65.340)
O2': (-51.899,8.001,65.522)
N1: (-52.144,11.453,66.627)
O4: (-53.750,14.747,68.146)
O2: (-53.104,10.311,68.319)
C6: (-51.901,12.657,66.039)
C5: (-52.411,13.790,66.484)
O3': (-52.462,8.745,62.971)
Image (generated by PyMOL):