Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A61:A62
Extra
PDB:
ATOM 1 O3' C A 60 1.718 14.664 -25.105 1.00 30.33 O
ATOM 2 P C A 61 1.630 13.522 -23.990 1.00 30.44 P
ATOM 3 OP1 C A 61 0.738 12.484 -24.540 1.00 27.90 O
ATOM 4 OP2 C A 61 1.333 14.136 -22.677 1.00 28.93 O
ATOM 5 O5' C A 61 3.127 12.965 -23.937 1.00 30.88 O
ATOM 6 C5' C A 61 3.626 12.140 -24.982 1.00 34.45 C
ATOM 7 C4' C A 61 5.059 11.748 -24.681 1.00 32.43 C
ATOM 8 O4' C A 61 5.846 12.949 -24.489 1.00 32.55 O
ATOM 9 C3' C A 61 5.252 10.977 -23.384 1.00 31.96 C
ATOM 10 O3' C A 61 4.981 9.593 -23.574 1.00 29.58 O
ATOM 11 C2' C A 61 6.729 11.240 -23.119 1.00 34.90 C
ATOM 12 O2' C A 61 7.575 10.481 -23.958 1.00 38.03 O
ATOM 13 C1' C A 61 6.837 12.712 -23.504 1.00 36.01 C
ATOM 14 N1 C A 61 6.641 13.657 -22.367 1.00 34.12 N
ATOM 15 C2 C A 61 7.671 13.822 -21.437 1.00 33.05 C
ATOM 16 O2 C A 61 8.717 13.176 -21.581 1.00 34.48 O
ATOM 17 N3 C A 61 7.494 14.685 -20.407 1.00 32.93 N
ATOM 18 C4 C A 61 6.349 15.361 -20.293 1.00 30.29 C
ATOM 19 N4 C A 61 6.222 16.201 -19.262 1.00 27.61 N
ATOM 20 C5 C A 61 5.285 15.206 -21.232 1.00 29.70 C
ATOM 21 C6 C A 61 5.473 14.352 -22.244 1.00 31.35 C
ATOM 22 P U A 62 4.324 8.738 -22.389 1.00 33.73 P
ATOM 23 OP1 U A 62 4.130 7.357 -22.881 1.00 33.91 O
ATOM 24 OP2 U A 62 3.175 9.492 -21.844 1.00 33.81 O
ATOM 25 O5' U A 62 5.485 8.708 -21.294 1.00 31.02 O
TER
ATOM 1 O3' C B 61 4.981 9.593 -23.574 1.00 29.58 O
ATOM 2 P U B 62 4.324 8.738 -22.389 1.00 33.73 P
ATOM 3 OP1 U B 62 4.130 7.357 -22.881 1.00 33.91 O
ATOM 4 OP2 U B 62 3.175 9.492 -21.844 1.00 33.81 O
ATOM 5 O5' U B 62 5.485 8.708 -21.294 1.00 31.02 O
ATOM 6 C5' U B 62 6.692 8.024 -21.584 1.00 35.75 C
ATOM 7 C4' U B 62 7.717 8.257 -20.493 1.00 35.02 C
ATOM 8 O4' U B 62 8.154 9.639 -20.521 1.00 35.73 O
ATOM 9 C3' U B 62 7.218 8.073 -19.068 1.00 30.20 C
ATOM 10 O3' U B 62 7.158 6.697 -18.706 1.00 32.30 O
ATOM 11 C2' U B 62 8.325 8.805 -18.325 1.00 32.50 C
ATOM 12 O2' U B 62 9.544 8.088 -18.314 1.00 36.17 O
ATOM 13 C1' U B 62 8.460 10.045 -19.200 1.00 31.62 C
ATOM 14 N1 U B 62 7.519 11.115 -18.787 1.00 27.93 N
ATOM 15 C2 U B 62 7.857 11.889 -17.701 1.00 29.35 C
ATOM 16 O2 U B 62 8.891 11.741 -17.073 1.00 28.18 O
ATOM 17 N3 U B 62 6.939 12.856 -17.377 1.00 31.49 N
ATOM 18 C4 U B 62 5.742 13.118 -18.009 1.00 29.55 C
ATOM 19 O4 U B 62 5.030 14.027 -17.591 1.00 29.70 O
ATOM 20 C5 U B 62 5.455 12.262 -19.133 1.00 31.45 C
ATOM 21 C6 U B 62 6.336 11.308 -19.473 1.00 28.14 C
ATOM 22 P G B 63 6.141 6.214 -17.565 1.00 32.28 P
ATOM 23 OP1 G B 63 6.207 4.737 -17.504 1.00 36.13 O
ATOM 24 OP2 G B 63 4.834 6.870 -17.788 1.00 34.89 O
ATOM 25 O5' G B 63 6.772 6.807 -16.225 1.00 26.25 O
TER
ATOM 2 P C A 61 1.630 13.522 -23.990 1.00 30.44 P
ATOM 3 OP1 C A 61 0.738 12.484 -24.540 1.00 27.90 O
ATOM 4 OP2 C A 61 1.333 14.136 -22.677 1.00 28.93 O
ATOM 5 O5' C A 61 3.127 12.965 -23.937 1.00 30.88 O
ATOM 6 C5' C A 61 3.626 12.140 -24.982 1.00 34.45 C
ATOM 7 C4' C A 61 5.059 11.748 -24.681 1.00 32.43 C
ATOM 8 O4' C A 61 5.846 12.949 -24.489 1.00 32.55 O
ATOM 9 C3' C A 61 5.252 10.977 -23.384 1.00 31.96 C
ATOM 10 O3' C A 61 4.981 9.593 -23.574 1.00 29.58 O
ATOM 11 C2' C A 61 6.729 11.240 -23.119 1.00 34.90 C
ATOM 12 O2' C A 61 7.575 10.481 -23.958 1.00 38.03 O
ATOM 13 C1' C A 61 6.837 12.712 -23.504 1.00 36.01 C
ATOM 14 N1 C A 61 6.641 13.657 -22.367 1.00 34.12 N
ATOM 15 C2 C A 61 7.671 13.822 -21.437 1.00 33.05 C
ATOM 16 O2 C A 61 8.717 13.176 -21.581 1.00 34.48 O
ATOM 17 N3 C A 61 7.494 14.685 -20.407 1.00 32.93 N
ATOM 18 C4 C A 61 6.349 15.361 -20.293 1.00 30.29 C
ATOM 19 N4 C A 61 6.222 16.201 -19.262 1.00 27.61 N
ATOM 20 C5 C A 61 5.285 15.206 -21.232 1.00 29.70 C
ATOM 21 C6 C A 61 5.473 14.352 -22.244 1.00 31.35 C
ATOM 22 P U A 62 4.324 8.738 -22.389 1.00 33.73 P
ATOM 23 OP1 U A 62 4.130 7.357 -22.881 1.00 33.91 O
ATOM 24 OP2 U A 62 3.175 9.492 -21.844 1.00 33.81 O
ATOM 25 O5' U A 62 5.485 8.708 -21.294 1.00 31.02 O
TER
ATOM 1 O3' C B 61 4.981 9.593 -23.574 1.00 29.58 O
ATOM 2 P U B 62 4.324 8.738 -22.389 1.00 33.73 P
ATOM 3 OP1 U B 62 4.130 7.357 -22.881 1.00 33.91 O
ATOM 4 OP2 U B 62 3.175 9.492 -21.844 1.00 33.81 O
ATOM 5 O5' U B 62 5.485 8.708 -21.294 1.00 31.02 O
ATOM 6 C5' U B 62 6.692 8.024 -21.584 1.00 35.75 C
ATOM 7 C4' U B 62 7.717 8.257 -20.493 1.00 35.02 C
ATOM 8 O4' U B 62 8.154 9.639 -20.521 1.00 35.73 O
ATOM 9 C3' U B 62 7.218 8.073 -19.068 1.00 30.20 C
ATOM 10 O3' U B 62 7.158 6.697 -18.706 1.00 32.30 O
ATOM 11 C2' U B 62 8.325 8.805 -18.325 1.00 32.50 C
ATOM 12 O2' U B 62 9.544 8.088 -18.314 1.00 36.17 O
ATOM 13 C1' U B 62 8.460 10.045 -19.200 1.00 31.62 C
ATOM 14 N1 U B 62 7.519 11.115 -18.787 1.00 27.93 N
ATOM 15 C2 U B 62 7.857 11.889 -17.701 1.00 29.35 C
ATOM 16 O2 U B 62 8.891 11.741 -17.073 1.00 28.18 O
ATOM 17 N3 U B 62 6.939 12.856 -17.377 1.00 31.49 N
ATOM 18 C4 U B 62 5.742 13.118 -18.009 1.00 29.55 C
ATOM 19 O4 U B 62 5.030 14.027 -17.591 1.00 29.70 O
ATOM 20 C5 U B 62 5.455 12.262 -19.133 1.00 31.45 C
ATOM 21 C6 U B 62 6.336 11.308 -19.473 1.00 28.14 C
ATOM 22 P G B 63 6.141 6.214 -17.565 1.00 32.28 P
ATOM 23 OP1 G B 63 6.207 4.737 -17.504 1.00 36.13 O
ATOM 24 OP2 G B 63 4.834 6.870 -17.788 1.00 34.89 O
ATOM 25 O5' G B 63 6.772 6.807 -16.225 1.00 26.25 O
TER
Atoms:
C2: (7.671,13.822,-21.437)
OP1: (0.738,12.484,-24.540)
OP2: (1.333,14.136,-22.677)
C4: (6.349,15.361,-20.293)
O5': (3.127,12.965,-23.937)
C3': (5.252,10.977,-23.384)
C1': (6.837,12.712,-23.504)
O4': (5.846,12.949,-24.489)
C5': (3.626,12.140,-24.982)
P: (1.630,13.522,-23.990)
O2: (8.717,13.176,-21.581)
C4': (5.059,11.748,-24.681)
C2': (6.729,11.240,-23.119)
O2': (7.575,10.481,-23.958)
N1: (6.641,13.657,-22.367)
N3: (7.494,14.685,-20.407)
N4: (6.222,16.201,-19.262)
C6: (5.473,14.352,-22.244)
C5: (5.285,15.206,-21.232)
O3': (4.981,9.593,-23.574)
OP1: (0.738,12.484,-24.540)
OP2: (1.333,14.136,-22.677)
C4: (6.349,15.361,-20.293)
O5': (3.127,12.965,-23.937)
C3': (5.252,10.977,-23.384)
C1': (6.837,12.712,-23.504)
O4': (5.846,12.949,-24.489)
C5': (3.626,12.140,-24.982)
P: (1.630,13.522,-23.990)
O2: (8.717,13.176,-21.581)
C4': (5.059,11.748,-24.681)
C2': (6.729,11.240,-23.119)
O2': (7.575,10.481,-23.958)
N1: (6.641,13.657,-22.367)
N3: (7.494,14.685,-20.407)
N4: (6.222,16.201,-19.262)
C6: (5.473,14.352,-22.244)
C5: (5.285,15.206,-21.232)
O3': (4.981,9.593,-23.574)
C4: (5.742,13.118,-18.009)
N3: (6.939,12.856,-17.377)
OP1: (4.130,7.357,-22.881)
OP2: (3.175,9.492,-21.844)
C2: (7.857,11.889,-17.701)
C1': (8.460,10.045,-19.200)
C3': (7.218,8.073,-19.068)
O5': (5.485,8.708,-21.294)
O4': (8.154,9.639,-20.521)
C5': (6.692,8.024,-21.584)
P: (4.324,8.738,-22.389)
C4': (7.717,8.257,-20.493)
C2': (8.325,8.805,-18.325)
O2': (9.544,8.088,-18.314)
N1: (7.519,11.115,-18.787)
O4: (5.030,14.027,-17.591)
O2: (8.891,11.741,-17.073)
C6: (6.336,11.308,-19.473)
C5: (5.455,12.262,-19.133)
O3': (7.158,6.697,-18.706)
N3: (6.939,12.856,-17.377)
OP1: (4.130,7.357,-22.881)
OP2: (3.175,9.492,-21.844)
C2: (7.857,11.889,-17.701)
C1': (8.460,10.045,-19.200)
C3': (7.218,8.073,-19.068)
O5': (5.485,8.708,-21.294)
O4': (8.154,9.639,-20.521)
C5': (6.692,8.024,-21.584)
P: (4.324,8.738,-22.389)
C4': (7.717,8.257,-20.493)
C2': (8.325,8.805,-18.325)
O2': (9.544,8.088,-18.314)
N1: (7.519,11.115,-18.787)
O4: (5.030,14.027,-17.591)
O2: (8.891,11.741,-17.073)
C6: (6.336,11.308,-19.473)
C5: (5.455,12.262,-19.133)
O3': (7.158,6.697,-18.706)
Image (generated by PyMOL):