ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q82:A582:A583

Extra

PDB:
ATOM 1 O3' A A 581 0.634 107.794 98.007 1.00 46.27 O
ATOM 2 P C A 582 -0.419 108.670 97.194 1.00 42.99 P
ATOM 3 OP1 C A 582 0.217 109.977 96.933 1.00 43.09 O
ATOM 4 OP2 C A 582 -1.703 108.615 97.909 1.00 44.25 O
ATOM 5 O5' C A 582 -0.546 107.901 95.810 1.00 42.16 O
ATOM 6 C5' C A 582 0.540 107.925 94.881 1.00 40.87 C
ATOM 7 C4' C A 582 0.244 107.045 93.696 1.00 42.12 C
ATOM 8 O4' C A 582 -0.092 105.719 94.177 1.00 43.52 O
ATOM 9 C3' C A 582 -0.954 107.428 92.851 1.00 40.81 C
ATOM 10 O3' C A 582 -0.649 108.503 91.963 1.00 39.17 O
ATOM 11 C2' C A 582 -1.275 106.104 92.162 1.00 41.55 C
ATOM 12 O2' C A 582 -0.394 105.768 91.104 1.00 39.68 O
ATOM 13 C1' C A 582 -1.040 105.123 93.310 1.00 43.24 C
ATOM 14 N1 C A 582 -2.266 104.832 94.074 1.00 45.62 N
ATOM 15 C2 C A 582 -3.146 103.858 93.577 1.00 47.71 C
ATOM 16 O2 C A 582 -2.851 103.248 92.531 1.00 48.97 O
ATOM 17 N3 C A 582 -4.295 103.600 94.245 1.00 48.71 N
ATOM 18 C4 C A 582 -4.578 104.265 95.362 1.00 47.52 C
ATOM 19 N4 C A 582 -5.727 103.988 95.977 1.00 48.37 N
ATOM 20 C5 C A 582 -3.696 105.247 95.899 1.00 47.51 C
ATOM 21 C6 C A 582 -2.560 105.494 95.234 1.00 46.25 C
ATOM 22 P U A 583 -1.794 109.552 91.567 1.00 40.23 P
ATOM 23 OP1 U A 583 -1.260 110.391 90.495 1.00 40.18 O
ATOM 24 OP2 U A 583 -2.332 110.195 92.778 1.00 39.99 O
ATOM 25 O5' U A 583 -2.931 108.627 90.957 1.00 42.23 O
TER

ATOM 1 O3' C B 582 -0.649 108.503 91.963 1.00 39.17 O
ATOM 2 P U B 583 -1.794 109.552 91.567 1.00 40.23 P
ATOM 3 OP1 U B 583 -1.260 110.391 90.495 1.00 40.18 O
ATOM 4 OP2 U B 583 -2.332 110.195 92.778 1.00 39.99 O
ATOM 5 O5' U B 583 -2.931 108.627 90.957 1.00 42.23 O
ATOM 6 C5' U B 583 -2.707 107.926 89.731 1.00 45.87 C
ATOM 7 C4' U B 583 -3.957 107.203 89.300 1.00 48.83 C
ATOM 8 O4' U B 583 -4.191 106.047 90.153 1.00 50.04 O
ATOM 9 C3' U B 583 -5.237 108.014 89.397 1.00 49.78 C
ATOM 10 O3' U B 583 -5.410 108.904 88.298 1.00 50.72 O
ATOM 11 C2' U B 583 -6.289 106.920 89.477 1.00 50.30 C
ATOM 12 O2' U B 583 -6.567 106.340 88.218 1.00 49.24 O
ATOM 13 C1' U B 583 -5.587 105.910 90.394 1.00 51.40 C
ATOM 14 N1 U B 583 -5.842 106.232 91.810 1.00 53.13 N
ATOM 15 C2 U B 583 -6.952 105.683 92.426 1.00 53.80 C
ATOM 16 O2 U B 583 -7.697 104.894 91.877 1.00 55.65 O
ATOM 17 N3 U B 583 -7.151 106.087 93.723 1.00 53.97 N
ATOM 18 C4 U B 583 -6.364 106.952 94.455 1.00 53.77 C
ATOM 19 O4 U B 583 -6.693 107.260 95.601 1.00 53.83 O
ATOM 20 C5 U B 583 -5.224 107.443 93.762 1.00 54.06 C
ATOM 21 C6 U B 583 -5.007 107.080 92.501 1.00 53.57 C
ATOM 22 P C B 584 -6.364 110.183 88.459 1.00 50.58 P
ATOM 23 OP1 C B 584 -6.266 110.985 87.224 1.00 51.13 O
ATOM 24 OP2 C B 584 -6.108 110.834 89.762 1.00 49.45 O
ATOM 25 O5' C B 584 -7.811 109.519 88.489 1.00 53.60 O
TER

Atoms:
C2: (-3.146,103.858,93.577)
OP1: (0.217,109.977,96.933)
OP2: (-1.703,108.615,97.909)
C4: (-4.578,104.265,95.362)
O5': (-0.546,107.901,95.810)
C3': (-0.954,107.428,92.851)
C1': (-1.040,105.123,93.310)
O4': (-0.092,105.719,94.177)
C5': (0.540,107.925,94.881)
P: (-0.419,108.670,97.194)
O2: (-2.851,103.248,92.531)
C4': (0.244,107.045,93.696)
C2': (-1.275,106.104,92.162)
O2': (-0.394,105.768,91.104)
N1: (-2.266,104.832,94.074)
N3: (-4.295,103.600,94.245)
N4: (-5.727,103.988,95.977)
C6: (-2.560,105.494,95.234)
C5: (-3.696,105.247,95.899)
O3': (-0.649,108.503,91.963)
C4: (-6.364,106.952,94.455)
N3: (-7.151,106.087,93.723)
OP1: (-1.260,110.391,90.495)
OP2: (-2.332,110.195,92.778)
C2: (-6.952,105.683,92.426)
C1': (-5.587,105.910,90.394)
C3': (-5.237,108.014,89.397)
O5': (-2.931,108.627,90.957)
O4': (-4.191,106.047,90.153)
C5': (-2.707,107.926,89.731)
P: (-1.794,109.552,91.567)
C4': (-3.957,107.203,89.300)
C2': (-6.289,106.920,89.477)
O2': (-6.567,106.340,88.218)
N1: (-5.842,106.232,91.810)
O4: (-6.693,107.260,95.601)
O2: (-7.697,104.894,91.877)
C6: (-5.007,107.080,92.501)
C5: (-5.224,107.443,93.762)
O3': (-5.410,108.904,88.298)
Image (generated by PyMOL):
PyMOL image
show in jmol