Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0700:0702
Extra
PDB:
ATOM 1 O3' G A 699 8.266 58.970 52.440 1.00 50.03 O
ATOM 2 P C A 700 6.835 58.773 53.140 1.00 54.15 P
ATOM 3 OP1 C A 700 5.904 58.434 52.031 1.00 54.56 O
ATOM 4 OP2 C A 700 6.521 59.916 54.041 1.00 50.51 O
ATOM 5 O5' C A 700 7.054 57.482 54.045 1.00 54.30 O
ATOM 6 C5' C A 700 7.497 56.251 53.455 1.00 56.57 C
ATOM 7 C4' C A 700 7.632 55.183 54.507 1.00 58.67 C
ATOM 8 O4' C A 700 8.816 55.409 55.314 1.00 58.61 O
ATOM 9 C3' C A 700 6.517 55.110 55.534 1.00 59.47 C
ATOM 10 O3' C A 700 5.339 54.505 55.017 1.00 59.84 O
ATOM 11 C2' C A 700 7.179 54.306 56.646 1.00 59.81 C
ATOM 12 O2' C A 700 7.238 52.918 56.383 1.00 59.36 O
ATOM 13 C1' C A 700 8.599 54.883 56.616 1.00 59.72 C
ATOM 14 N1 C A 700 8.794 55.954 57.614 1.00 59.10 N
ATOM 15 C2 C A 700 9.361 55.619 58.852 1.00 58.53 C
ATOM 16 O2 C A 700 9.709 54.448 59.056 1.00 60.14 O
ATOM 17 N3 C A 700 9.517 56.575 59.790 1.00 57.53 N
ATOM 18 C4 C A 700 9.140 57.826 59.532 1.00 57.38 C
ATOM 19 N4 C A 700 9.307 58.733 60.494 1.00 57.16 N
ATOM 20 C5 C A 700 8.573 58.203 58.277 1.00 57.40 C
ATOM 21 C6 C A 700 8.421 57.245 57.355 1.00 58.01 C
ATOM 22 P U A 701 3.913 54.869 55.663 1.00 60.50 P
ATOM 23 OP1 U A 701 2.864 54.279 54.799 1.00 61.18 O
ATOM 24 OP2 U A 701 3.876 56.324 55.974 1.00 61.18 O
ATOM 25 O5' U A 701 3.941 54.092 57.049 1.00 59.70 O
TER
ATOM 1 O3' U B 701 3.862 52.254 60.991 1.00 60.57 O
ATOM 2 P U B 702 3.561 53.173 62.275 1.00 61.34 P
ATOM 3 OP1 U B 702 3.102 52.292 63.369 1.00 64.24 O
ATOM 4 OP2 U B 702 2.692 54.296 61.832 1.00 61.58 O
ATOM 5 O5' U B 702 4.983 53.765 62.681 1.00 63.23 O
ATOM 6 C5' U B 702 6.014 52.922 63.237 1.00 66.44 C
ATOM 7 C4' U B 702 6.884 53.714 64.193 1.00 69.00 C
ATOM 8 O4' U B 702 7.484 54.824 63.467 1.00 69.76 O
ATOM 9 C3' U B 702 6.175 54.338 65.393 1.00 70.67 C
ATOM 10 O3' U B 702 7.094 54.505 66.489 1.00 69.84 O
ATOM 11 C2' U B 702 5.816 55.728 64.875 1.00 70.83 C
ATOM 12 O2' U B 702 5.652 56.671 65.918 1.00 71.63 O
ATOM 13 C1' U B 702 7.032 56.055 64.005 1.00 70.92 C
ATOM 14 N1 U B 702 6.723 56.957 62.882 1.00 71.97 N
ATOM 15 C2 U B 702 7.031 58.309 63.014 1.00 72.99 C
ATOM 16 O2 U B 702 7.559 58.783 64.010 1.00 73.32 O
ATOM 17 N3 U B 702 6.696 59.085 61.929 1.00 72.38 N
ATOM 18 C4 U B 702 6.106 58.663 60.751 1.00 73.34 C
ATOM 19 O4 U B 702 5.873 59.481 59.859 1.00 73.56 O
ATOM 20 C5 U B 702 5.830 57.260 60.691 1.00 73.67 C
ATOM 21 C6 U B 702 6.139 56.477 61.729 1.00 72.77 C
TER
ATOM 2 P C A 700 6.835 58.773 53.140 1.00 54.15 P
ATOM 3 OP1 C A 700 5.904 58.434 52.031 1.00 54.56 O
ATOM 4 OP2 C A 700 6.521 59.916 54.041 1.00 50.51 O
ATOM 5 O5' C A 700 7.054 57.482 54.045 1.00 54.30 O
ATOM 6 C5' C A 700 7.497 56.251 53.455 1.00 56.57 C
ATOM 7 C4' C A 700 7.632 55.183 54.507 1.00 58.67 C
ATOM 8 O4' C A 700 8.816 55.409 55.314 1.00 58.61 O
ATOM 9 C3' C A 700 6.517 55.110 55.534 1.00 59.47 C
ATOM 10 O3' C A 700 5.339 54.505 55.017 1.00 59.84 O
ATOM 11 C2' C A 700 7.179 54.306 56.646 1.00 59.81 C
ATOM 12 O2' C A 700 7.238 52.918 56.383 1.00 59.36 O
ATOM 13 C1' C A 700 8.599 54.883 56.616 1.00 59.72 C
ATOM 14 N1 C A 700 8.794 55.954 57.614 1.00 59.10 N
ATOM 15 C2 C A 700 9.361 55.619 58.852 1.00 58.53 C
ATOM 16 O2 C A 700 9.709 54.448 59.056 1.00 60.14 O
ATOM 17 N3 C A 700 9.517 56.575 59.790 1.00 57.53 N
ATOM 18 C4 C A 700 9.140 57.826 59.532 1.00 57.38 C
ATOM 19 N4 C A 700 9.307 58.733 60.494 1.00 57.16 N
ATOM 20 C5 C A 700 8.573 58.203 58.277 1.00 57.40 C
ATOM 21 C6 C A 700 8.421 57.245 57.355 1.00 58.01 C
ATOM 22 P U A 701 3.913 54.869 55.663 1.00 60.50 P
ATOM 23 OP1 U A 701 2.864 54.279 54.799 1.00 61.18 O
ATOM 24 OP2 U A 701 3.876 56.324 55.974 1.00 61.18 O
ATOM 25 O5' U A 701 3.941 54.092 57.049 1.00 59.70 O
TER
ATOM 1 O3' U B 701 3.862 52.254 60.991 1.00 60.57 O
ATOM 2 P U B 702 3.561 53.173 62.275 1.00 61.34 P
ATOM 3 OP1 U B 702 3.102 52.292 63.369 1.00 64.24 O
ATOM 4 OP2 U B 702 2.692 54.296 61.832 1.00 61.58 O
ATOM 5 O5' U B 702 4.983 53.765 62.681 1.00 63.23 O
ATOM 6 C5' U B 702 6.014 52.922 63.237 1.00 66.44 C
ATOM 7 C4' U B 702 6.884 53.714 64.193 1.00 69.00 C
ATOM 8 O4' U B 702 7.484 54.824 63.467 1.00 69.76 O
ATOM 9 C3' U B 702 6.175 54.338 65.393 1.00 70.67 C
ATOM 10 O3' U B 702 7.094 54.505 66.489 1.00 69.84 O
ATOM 11 C2' U B 702 5.816 55.728 64.875 1.00 70.83 C
ATOM 12 O2' U B 702 5.652 56.671 65.918 1.00 71.63 O
ATOM 13 C1' U B 702 7.032 56.055 64.005 1.00 70.92 C
ATOM 14 N1 U B 702 6.723 56.957 62.882 1.00 71.97 N
ATOM 15 C2 U B 702 7.031 58.309 63.014 1.00 72.99 C
ATOM 16 O2 U B 702 7.559 58.783 64.010 1.00 73.32 O
ATOM 17 N3 U B 702 6.696 59.085 61.929 1.00 72.38 N
ATOM 18 C4 U B 702 6.106 58.663 60.751 1.00 73.34 C
ATOM 19 O4 U B 702 5.873 59.481 59.859 1.00 73.56 O
ATOM 20 C5 U B 702 5.830 57.260 60.691 1.00 73.67 C
ATOM 21 C6 U B 702 6.139 56.477 61.729 1.00 72.77 C
TER
Atoms:
C2: (9.361,55.619,58.852)
OP1: (5.904,58.434,52.031)
OP2: (6.521,59.916,54.041)
C4: (9.140,57.826,59.532)
O5': (7.054,57.482,54.045)
C3': (6.517,55.110,55.534)
C1': (8.599,54.883,56.616)
O4': (8.816,55.409,55.314)
C5': (7.497,56.251,53.455)
P: (6.835,58.773,53.140)
O2: (9.709,54.448,59.056)
C4': (7.632,55.183,54.507)
C2': (7.179,54.306,56.646)
O2': (7.238,52.918,56.383)
N1: (8.794,55.954,57.614)
N3: (9.517,56.575,59.790)
N4: (9.307,58.733,60.494)
C6: (8.421,57.245,57.355)
C5: (8.573,58.203,58.277)
O3': (5.339,54.505,55.017)
OP1: (5.904,58.434,52.031)
OP2: (6.521,59.916,54.041)
C4: (9.140,57.826,59.532)
O5': (7.054,57.482,54.045)
C3': (6.517,55.110,55.534)
C1': (8.599,54.883,56.616)
O4': (8.816,55.409,55.314)
C5': (7.497,56.251,53.455)
P: (6.835,58.773,53.140)
O2: (9.709,54.448,59.056)
C4': (7.632,55.183,54.507)
C2': (7.179,54.306,56.646)
O2': (7.238,52.918,56.383)
N1: (8.794,55.954,57.614)
N3: (9.517,56.575,59.790)
N4: (9.307,58.733,60.494)
C6: (8.421,57.245,57.355)
C5: (8.573,58.203,58.277)
O3': (5.339,54.505,55.017)
C4: (6.106,58.663,60.751)
N3: (6.696,59.085,61.929)
OP1: (3.102,52.292,63.369)
OP2: (2.692,54.296,61.832)
C2: (7.031,58.309,63.014)
C1': (7.032,56.055,64.005)
C3': (6.175,54.338,65.393)
O5': (4.983,53.765,62.681)
O4': (7.484,54.824,63.467)
C5': (6.014,52.922,63.237)
P: (3.561,53.173,62.275)
C4': (6.884,53.714,64.193)
C2': (5.816,55.728,64.875)
O2': (5.652,56.671,65.918)
N1: (6.723,56.957,62.882)
O4: (5.873,59.481,59.859)
O2: (7.559,58.783,64.010)
C6: (6.139,56.477,61.729)
C5: (5.830,57.260,60.691)
O3': (7.094,54.505,66.489)
N3: (6.696,59.085,61.929)
OP1: (3.102,52.292,63.369)
OP2: (2.692,54.296,61.832)
C2: (7.031,58.309,63.014)
C1': (7.032,56.055,64.005)
C3': (6.175,54.338,65.393)
O5': (4.983,53.765,62.681)
O4': (7.484,54.824,63.467)
C5': (6.014,52.922,63.237)
P: (3.561,53.173,62.275)
C4': (6.884,53.714,64.193)
C2': (5.816,55.728,64.875)
O2': (5.652,56.671,65.918)
N1: (6.723,56.957,62.882)
O4: (5.873,59.481,59.859)
O2: (7.559,58.783,64.010)
C6: (6.139,56.477,61.729)
C5: (5.830,57.260,60.691)
O3': (7.094,54.505,66.489)
Image (generated by PyMOL):