Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:024:025
Extra
PDB:
ATOM 1 O3' G A 23 46.396 130.866 47.952 1.00 27.38 O
ATOM 2 P C A 24 47.232 129.897 46.984 1.00 28.53 P
ATOM 3 OP1 C A 24 48.614 129.826 47.511 1.00 28.77 O
ATOM 4 OP2 C A 24 47.001 130.324 45.593 1.00 30.20 O
ATOM 5 O5' C A 24 46.560 128.468 47.172 1.00 29.20 O
ATOM 6 C5' C A 24 46.562 127.816 48.454 1.00 28.59 C
ATOM 7 C4' C A 24 45.653 126.613 48.430 1.00 27.30 C
ATOM 8 O4' C A 24 44.260 127.020 48.347 1.00 28.16 O
ATOM 9 C3' C A 24 45.831 125.687 47.250 1.00 25.63 C
ATOM 10 O3' C A 24 46.937 124.830 47.456 1.00 26.04 O
ATOM 11 C2' C A 24 44.509 124.942 47.260 1.00 28.09 C
ATOM 12 O2' C A 24 44.460 124.012 48.322 1.00 30.05 O
ATOM 13 C1' C A 24 43.533 126.073 47.590 1.00 28.02 C
ATOM 14 N1 C A 24 42.986 126.749 46.395 1.00 31.12 N
ATOM 15 C2 C A 24 41.936 126.141 45.681 1.00 31.96 C
ATOM 16 O2 C A 24 41.508 125.041 46.049 1.00 33.76 O
ATOM 17 N3 C A 24 41.420 126.769 44.604 1.00 32.02 N
ATOM 18 C4 C A 24 41.910 127.948 44.222 1.00 33.95 C
ATOM 19 N4 C A 24 41.361 128.534 43.160 1.00 34.75 N
ATOM 20 C5 C A 24 42.984 128.582 44.914 1.00 33.87 C
ATOM 21 C6 C A 24 43.486 127.955 45.984 1.00 32.60 C
ATOM 22 P U A 25 47.822 124.357 46.204 1.00 26.21 P
ATOM 23 OP1 U A 25 48.987 123.624 46.741 1.00 25.84 O
ATOM 24 OP2 U A 25 48.036 125.529 45.334 1.00 27.97 O
ATOM 25 O5' U A 25 46.884 123.344 45.414 1.00 27.59 O
TER
ATOM 1 O3' C B 24 46.937 124.830 47.456 1.00 26.04 O
ATOM 2 P U B 25 47.822 124.357 46.204 1.00 26.21 P
ATOM 3 OP1 U B 25 48.987 123.624 46.741 1.00 25.84 O
ATOM 4 OP2 U B 25 48.036 125.529 45.334 1.00 27.97 O
ATOM 5 O5' U B 25 46.884 123.344 45.414 1.00 27.59 O
ATOM 6 C5' U B 25 46.502 122.087 45.995 1.00 30.31 C
ATOM 7 C4' U B 25 45.408 121.433 45.180 1.00 31.74 C
ATOM 8 O4' U B 25 44.198 122.239 45.223 1.00 32.37 O
ATOM 9 C3' U B 25 45.677 121.265 43.695 1.00 30.96 C
ATOM 10 O3' U B 25 46.511 120.143 43.430 1.00 29.04 O
ATOM 11 C2' U B 25 44.267 121.092 43.145 1.00 32.62 C
ATOM 12 O2' U B 25 43.731 119.807 43.381 1.00 33.70 O
ATOM 13 C1' U B 25 43.490 122.090 44.004 1.00 33.91 C
ATOM 14 N1 U B 25 43.377 123.402 43.351 1.00 36.94 N
ATOM 15 C2 U B 25 42.348 123.575 42.437 1.00 38.53 C
ATOM 16 O2 U B 25 41.543 122.701 42.165 1.00 39.69 O
ATOM 17 N3 U B 25 42.298 124.811 41.848 1.00 40.31 N
ATOM 18 C4 U B 25 43.150 125.872 42.064 1.00 40.72 C
ATOM 19 O4 U B 25 42.980 126.918 41.436 1.00 40.74 O
ATOM 20 C5 U B 25 44.185 125.621 43.024 1.00 40.28 C
ATOM 21 C6 U B 25 44.260 124.425 43.621 1.00 39.06 C
ATOM 22 P C B 26 47.247 120.019 42.010 1.00 29.43 P
ATOM 23 OP1 C B 26 48.201 118.886 42.066 1.00 28.97 O
ATOM 24 OP2 C B 26 47.731 121.366 41.636 1.00 30.72 O
ATOM 25 O5' C B 26 46.080 119.630 41.003 1.00 29.22 O
TER
ATOM 2 P C A 24 47.232 129.897 46.984 1.00 28.53 P
ATOM 3 OP1 C A 24 48.614 129.826 47.511 1.00 28.77 O
ATOM 4 OP2 C A 24 47.001 130.324 45.593 1.00 30.20 O
ATOM 5 O5' C A 24 46.560 128.468 47.172 1.00 29.20 O
ATOM 6 C5' C A 24 46.562 127.816 48.454 1.00 28.59 C
ATOM 7 C4' C A 24 45.653 126.613 48.430 1.00 27.30 C
ATOM 8 O4' C A 24 44.260 127.020 48.347 1.00 28.16 O
ATOM 9 C3' C A 24 45.831 125.687 47.250 1.00 25.63 C
ATOM 10 O3' C A 24 46.937 124.830 47.456 1.00 26.04 O
ATOM 11 C2' C A 24 44.509 124.942 47.260 1.00 28.09 C
ATOM 12 O2' C A 24 44.460 124.012 48.322 1.00 30.05 O
ATOM 13 C1' C A 24 43.533 126.073 47.590 1.00 28.02 C
ATOM 14 N1 C A 24 42.986 126.749 46.395 1.00 31.12 N
ATOM 15 C2 C A 24 41.936 126.141 45.681 1.00 31.96 C
ATOM 16 O2 C A 24 41.508 125.041 46.049 1.00 33.76 O
ATOM 17 N3 C A 24 41.420 126.769 44.604 1.00 32.02 N
ATOM 18 C4 C A 24 41.910 127.948 44.222 1.00 33.95 C
ATOM 19 N4 C A 24 41.361 128.534 43.160 1.00 34.75 N
ATOM 20 C5 C A 24 42.984 128.582 44.914 1.00 33.87 C
ATOM 21 C6 C A 24 43.486 127.955 45.984 1.00 32.60 C
ATOM 22 P U A 25 47.822 124.357 46.204 1.00 26.21 P
ATOM 23 OP1 U A 25 48.987 123.624 46.741 1.00 25.84 O
ATOM 24 OP2 U A 25 48.036 125.529 45.334 1.00 27.97 O
ATOM 25 O5' U A 25 46.884 123.344 45.414 1.00 27.59 O
TER
ATOM 1 O3' C B 24 46.937 124.830 47.456 1.00 26.04 O
ATOM 2 P U B 25 47.822 124.357 46.204 1.00 26.21 P
ATOM 3 OP1 U B 25 48.987 123.624 46.741 1.00 25.84 O
ATOM 4 OP2 U B 25 48.036 125.529 45.334 1.00 27.97 O
ATOM 5 O5' U B 25 46.884 123.344 45.414 1.00 27.59 O
ATOM 6 C5' U B 25 46.502 122.087 45.995 1.00 30.31 C
ATOM 7 C4' U B 25 45.408 121.433 45.180 1.00 31.74 C
ATOM 8 O4' U B 25 44.198 122.239 45.223 1.00 32.37 O
ATOM 9 C3' U B 25 45.677 121.265 43.695 1.00 30.96 C
ATOM 10 O3' U B 25 46.511 120.143 43.430 1.00 29.04 O
ATOM 11 C2' U B 25 44.267 121.092 43.145 1.00 32.62 C
ATOM 12 O2' U B 25 43.731 119.807 43.381 1.00 33.70 O
ATOM 13 C1' U B 25 43.490 122.090 44.004 1.00 33.91 C
ATOM 14 N1 U B 25 43.377 123.402 43.351 1.00 36.94 N
ATOM 15 C2 U B 25 42.348 123.575 42.437 1.00 38.53 C
ATOM 16 O2 U B 25 41.543 122.701 42.165 1.00 39.69 O
ATOM 17 N3 U B 25 42.298 124.811 41.848 1.00 40.31 N
ATOM 18 C4 U B 25 43.150 125.872 42.064 1.00 40.72 C
ATOM 19 O4 U B 25 42.980 126.918 41.436 1.00 40.74 O
ATOM 20 C5 U B 25 44.185 125.621 43.024 1.00 40.28 C
ATOM 21 C6 U B 25 44.260 124.425 43.621 1.00 39.06 C
ATOM 22 P C B 26 47.247 120.019 42.010 1.00 29.43 P
ATOM 23 OP1 C B 26 48.201 118.886 42.066 1.00 28.97 O
ATOM 24 OP2 C B 26 47.731 121.366 41.636 1.00 30.72 O
ATOM 25 O5' C B 26 46.080 119.630 41.003 1.00 29.22 O
TER
Atoms:
C2: (41.936,126.141,45.681)
OP1: (48.614,129.826,47.511)
OP2: (47.001,130.324,45.593)
C4: (41.910,127.948,44.222)
O5': (46.560,128.468,47.172)
C3': (45.831,125.687,47.250)
C1': (43.533,126.073,47.590)
O4': (44.260,127.020,48.347)
C5': (46.562,127.816,48.454)
P: (47.232,129.897,46.984)
O2: (41.508,125.041,46.049)
C4': (45.653,126.613,48.430)
C2': (44.509,124.942,47.260)
O2': (44.460,124.012,48.322)
N1: (42.986,126.749,46.395)
N3: (41.420,126.769,44.604)
N4: (41.361,128.534,43.160)
C6: (43.486,127.955,45.984)
C5: (42.984,128.582,44.914)
O3': (46.937,124.830,47.456)
OP1: (48.614,129.826,47.511)
OP2: (47.001,130.324,45.593)
C4: (41.910,127.948,44.222)
O5': (46.560,128.468,47.172)
C3': (45.831,125.687,47.250)
C1': (43.533,126.073,47.590)
O4': (44.260,127.020,48.347)
C5': (46.562,127.816,48.454)
P: (47.232,129.897,46.984)
O2: (41.508,125.041,46.049)
C4': (45.653,126.613,48.430)
C2': (44.509,124.942,47.260)
O2': (44.460,124.012,48.322)
N1: (42.986,126.749,46.395)
N3: (41.420,126.769,44.604)
N4: (41.361,128.534,43.160)
C6: (43.486,127.955,45.984)
C5: (42.984,128.582,44.914)
O3': (46.937,124.830,47.456)
C4: (43.150,125.872,42.064)
N3: (42.298,124.811,41.848)
OP1: (48.987,123.624,46.741)
OP2: (48.036,125.529,45.334)
C2: (42.348,123.575,42.437)
C1': (43.490,122.090,44.004)
C3': (45.677,121.265,43.695)
O5': (46.884,123.344,45.414)
O4': (44.198,122.239,45.223)
C5': (46.502,122.087,45.995)
P: (47.822,124.357,46.204)
C4': (45.408,121.433,45.180)
C2': (44.267,121.092,43.145)
O2': (43.731,119.807,43.381)
N1: (43.377,123.402,43.351)
O4: (42.980,126.918,41.436)
O2: (41.543,122.701,42.165)
C6: (44.260,124.425,43.621)
C5: (44.185,125.621,43.024)
O3': (46.511,120.143,43.430)
N3: (42.298,124.811,41.848)
OP1: (48.987,123.624,46.741)
OP2: (48.036,125.529,45.334)
C2: (42.348,123.575,42.437)
C1': (43.490,122.090,44.004)
C3': (45.677,121.265,43.695)
O5': (46.884,123.344,45.414)
O4': (44.198,122.239,45.223)
C5': (46.502,122.087,45.995)
P: (47.822,124.357,46.204)
C4': (45.408,121.433,45.180)
C2': (44.267,121.092,43.145)
O2': (43.731,119.807,43.381)
N1: (43.377,123.402,43.351)
O4: (42.980,126.918,41.436)
O2: (41.543,122.701,42.165)
C6: (44.260,124.425,43.621)
C5: (44.185,125.621,43.024)
O3': (46.511,120.143,43.430)
Image (generated by PyMOL):