Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A425:A426
Extra
PDB:
ATOM 1 O3' G A 424 -59.372 -46.139 81.448 1.00 1.77 O
ATOM 2 P C A 425 -59.739 -47.464 80.611 1.00 3.69 P
ATOM 3 OP1 C A 425 -59.013 -47.368 79.326 1.00 3.69 O
ATOM 4 OP2 C A 425 -61.219 -47.583 80.577 1.00 3.69 O
ATOM 5 O5' C A 425 -59.128 -48.627 81.523 1.00 3.69 O
ATOM 6 C5' C A 425 -57.788 -48.554 81.973 1.00 3.69 C
ATOM 7 C4' C A 425 -57.507 -49.554 83.059 1.00 3.69 C
ATOM 8 O4' C A 425 -58.289 -49.240 84.235 1.00 3.69 O
ATOM 9 C3' C A 425 -57.877 -50.980 82.759 1.00 3.69 C
ATOM 10 O3' C A 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 11 C2' C A 425 -58.003 -51.579 84.148 1.00 3.69 C
ATOM 12 O2' C A 425 -56.729 -51.830 84.719 1.00 3.69 O
ATOM 13 C1' C A 425 -58.648 -50.424 84.900 1.00 3.69 C
ATOM 14 N1 C A 425 -60.085 -50.515 84.880 1.00 3.54 N
ATOM 15 C2 C A 425 -60.690 -51.397 85.746 1.00 3.54 C
ATOM 16 O2 C A 425 -59.953 -52.056 86.470 1.00 3.54 O
ATOM 17 N3 C A 425 -62.033 -51.494 85.750 1.00 3.54 N
ATOM 18 C4 C A 425 -62.740 -50.720 84.924 1.00 3.54 C
ATOM 19 N4 C A 425 -64.061 -50.833 84.931 1.00 3.54 N
ATOM 20 C5 C A 425 -62.135 -49.799 84.030 1.00 3.54 C
ATOM 21 C6 C A 425 -60.800 -49.728 84.032 1.00 3.54 C
ATOM 22 P U A 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 23 OP1 U A 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 24 OP2 U A 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 25 O5' U A 426 -58.064 -53.836 82.040 1.00 3.54 O
TER
ATOM 1 O3' C B 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 2 P U B 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 3 OP1 U B 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 4 OP2 U B 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 5 O5' U B 426 -58.064 -53.836 82.040 1.00 3.54 O
ATOM 6 C5' U B 426 -57.203 -54.615 82.844 1.00 3.54 C
ATOM 7 C4' U B 426 -57.962 -55.613 83.674 1.00 3.54 C
ATOM 8 O4' U B 426 -58.925 -54.923 84.495 1.00 3.54 O
ATOM 9 C3' U B 426 -58.799 -56.631 82.922 1.00 3.54 C
ATOM 10 O3' U B 426 -58.038 -57.705 82.416 1.00 3.54 O
ATOM 11 C2' U B 426 -59.817 -57.052 83.968 1.00 3.54 C
ATOM 12 O2' U B 426 -59.230 -57.929 84.916 1.00 3.54 O
ATOM 13 C1' U B 426 -60.085 -55.721 84.655 1.00 3.54 C
ATOM 14 N1 U B 426 -61.242 -54.995 84.062 1.00 3.60 N
ATOM 15 C2 U B 426 -62.525 -55.341 84.466 1.00 3.60 C
ATOM 16 O2 U B 426 -62.765 -56.234 85.260 1.00 3.60 O
ATOM 17 N3 U B 426 -63.511 -54.617 83.873 1.00 3.60 N
ATOM 18 C4 U B 426 -63.330 -53.607 82.968 1.00 3.60 C
ATOM 19 O4 U B 426 -64.311 -53.030 82.519 1.00 3.60 O
ATOM 20 C5 U B 426 -61.987 -53.303 82.612 1.00 3.60 C
ATOM 21 C6 U B 426 -61.008 -53.991 83.157 1.00 3.60 C
ATOM 22 P A B 427 -58.417 -58.343 80.989 1.00 1.59 P
ATOM 23 OP1 A B 427 -57.252 -58.068 80.066 1.00 1.59 O
ATOM 24 OP2 A B 427 -59.788 -57.832 80.626 1.00 1.59 O
ATOM 25 O5' A B 427 -58.506 -59.894 81.300 1.00 1.59 O
TER
ATOM 2 P C A 425 -59.739 -47.464 80.611 1.00 3.69 P
ATOM 3 OP1 C A 425 -59.013 -47.368 79.326 1.00 3.69 O
ATOM 4 OP2 C A 425 -61.219 -47.583 80.577 1.00 3.69 O
ATOM 5 O5' C A 425 -59.128 -48.627 81.523 1.00 3.69 O
ATOM 6 C5' C A 425 -57.788 -48.554 81.973 1.00 3.69 C
ATOM 7 C4' C A 425 -57.507 -49.554 83.059 1.00 3.69 C
ATOM 8 O4' C A 425 -58.289 -49.240 84.235 1.00 3.69 O
ATOM 9 C3' C A 425 -57.877 -50.980 82.759 1.00 3.69 C
ATOM 10 O3' C A 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 11 C2' C A 425 -58.003 -51.579 84.148 1.00 3.69 C
ATOM 12 O2' C A 425 -56.729 -51.830 84.719 1.00 3.69 O
ATOM 13 C1' C A 425 -58.648 -50.424 84.900 1.00 3.69 C
ATOM 14 N1 C A 425 -60.085 -50.515 84.880 1.00 3.54 N
ATOM 15 C2 C A 425 -60.690 -51.397 85.746 1.00 3.54 C
ATOM 16 O2 C A 425 -59.953 -52.056 86.470 1.00 3.54 O
ATOM 17 N3 C A 425 -62.033 -51.494 85.750 1.00 3.54 N
ATOM 18 C4 C A 425 -62.740 -50.720 84.924 1.00 3.54 C
ATOM 19 N4 C A 425 -64.061 -50.833 84.931 1.00 3.54 N
ATOM 20 C5 C A 425 -62.135 -49.799 84.030 1.00 3.54 C
ATOM 21 C6 C A 425 -60.800 -49.728 84.032 1.00 3.54 C
ATOM 22 P U A 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 23 OP1 U A 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 24 OP2 U A 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 25 O5' U A 426 -58.064 -53.836 82.040 1.00 3.54 O
TER
ATOM 1 O3' C B 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 2 P U B 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 3 OP1 U B 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 4 OP2 U B 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 5 O5' U B 426 -58.064 -53.836 82.040 1.00 3.54 O
ATOM 6 C5' U B 426 -57.203 -54.615 82.844 1.00 3.54 C
ATOM 7 C4' U B 426 -57.962 -55.613 83.674 1.00 3.54 C
ATOM 8 O4' U B 426 -58.925 -54.923 84.495 1.00 3.54 O
ATOM 9 C3' U B 426 -58.799 -56.631 82.922 1.00 3.54 C
ATOM 10 O3' U B 426 -58.038 -57.705 82.416 1.00 3.54 O
ATOM 11 C2' U B 426 -59.817 -57.052 83.968 1.00 3.54 C
ATOM 12 O2' U B 426 -59.230 -57.929 84.916 1.00 3.54 O
ATOM 13 C1' U B 426 -60.085 -55.721 84.655 1.00 3.54 C
ATOM 14 N1 U B 426 -61.242 -54.995 84.062 1.00 3.60 N
ATOM 15 C2 U B 426 -62.525 -55.341 84.466 1.00 3.60 C
ATOM 16 O2 U B 426 -62.765 -56.234 85.260 1.00 3.60 O
ATOM 17 N3 U B 426 -63.511 -54.617 83.873 1.00 3.60 N
ATOM 18 C4 U B 426 -63.330 -53.607 82.968 1.00 3.60 C
ATOM 19 O4 U B 426 -64.311 -53.030 82.519 1.00 3.60 O
ATOM 20 C5 U B 426 -61.987 -53.303 82.612 1.00 3.60 C
ATOM 21 C6 U B 426 -61.008 -53.991 83.157 1.00 3.60 C
ATOM 22 P A B 427 -58.417 -58.343 80.989 1.00 1.59 P
ATOM 23 OP1 A B 427 -57.252 -58.068 80.066 1.00 1.59 O
ATOM 24 OP2 A B 427 -59.788 -57.832 80.626 1.00 1.59 O
ATOM 25 O5' A B 427 -58.506 -59.894 81.300 1.00 1.59 O
TER
Atoms:
C2: (-60.690,-51.397,85.746)
OP1: (-59.013,-47.368,79.326)
OP2: (-61.219,-47.583,80.577)
C4: (-62.740,-50.720,84.924)
O5': (-59.128,-48.627,81.523)
C3': (-57.877,-50.980,82.759)
C1': (-58.648,-50.424,84.900)
O4': (-58.289,-49.240,84.235)
C5': (-57.788,-48.554,81.973)
P: (-59.739,-47.464,80.611)
O2: (-59.953,-52.056,86.470)
C4': (-57.507,-49.554,83.059)
C2': (-58.003,-51.579,84.148)
O2': (-56.729,-51.830,84.719)
N1: (-60.085,-50.515,84.880)
N3: (-62.033,-51.494,85.750)
N4: (-64.061,-50.833,84.931)
C6: (-60.800,-49.728,84.032)
C5: (-62.135,-49.799,84.030)
O3': (-56.945,-51.637,81.937)
OP1: (-59.013,-47.368,79.326)
OP2: (-61.219,-47.583,80.577)
C4: (-62.740,-50.720,84.924)
O5': (-59.128,-48.627,81.523)
C3': (-57.877,-50.980,82.759)
C1': (-58.648,-50.424,84.900)
O4': (-58.289,-49.240,84.235)
C5': (-57.788,-48.554,81.973)
P: (-59.739,-47.464,80.611)
O2: (-59.953,-52.056,86.470)
C4': (-57.507,-49.554,83.059)
C2': (-58.003,-51.579,84.148)
O2': (-56.729,-51.830,84.719)
N1: (-60.085,-50.515,84.880)
N3: (-62.033,-51.494,85.750)
N4: (-64.061,-50.833,84.931)
C6: (-60.800,-49.728,84.032)
C5: (-62.135,-49.799,84.030)
O3': (-56.945,-51.637,81.937)
C4: (-63.330,-53.607,82.968)
N3: (-63.511,-54.617,83.873)
OP1: (-56.281,-53.401,80.335)
OP2: (-58.546,-52.225,80.117)
C2: (-62.525,-55.341,84.466)
C1': (-60.085,-55.721,84.655)
C3': (-58.799,-56.631,82.922)
O5': (-58.064,-53.836,82.040)
O4': (-58.925,-54.923,84.495)
C5': (-57.203,-54.615,82.844)
P: (-57.459,-52.804,80.987)
C4': (-57.962,-55.613,83.674)
C2': (-59.817,-57.052,83.968)
O2': (-59.230,-57.929,84.916)
N1: (-61.242,-54.995,84.062)
O4: (-64.311,-53.030,82.519)
O2: (-62.765,-56.234,85.260)
C6: (-61.008,-53.991,83.157)
C5: (-61.987,-53.303,82.612)
O3': (-58.038,-57.705,82.416)
N3: (-63.511,-54.617,83.873)
OP1: (-56.281,-53.401,80.335)
OP2: (-58.546,-52.225,80.117)
C2: (-62.525,-55.341,84.466)
C1': (-60.085,-55.721,84.655)
C3': (-58.799,-56.631,82.922)
O5': (-58.064,-53.836,82.040)
O4': (-58.925,-54.923,84.495)
C5': (-57.203,-54.615,82.844)
P: (-57.459,-52.804,80.987)
C4': (-57.962,-55.613,83.674)
C2': (-59.817,-57.052,83.968)
O2': (-59.230,-57.929,84.916)
N1: (-61.242,-54.995,84.062)
O4: (-64.311,-53.030,82.519)
O2: (-62.765,-56.234,85.260)
C6: (-61.008,-53.991,83.157)
C5: (-61.987,-53.303,82.612)
O3': (-58.038,-57.705,82.416)
Image (generated by PyMOL):