Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:W30:W31
Extra
PDB:
ATOM 1 O3' G A 29 -21.367 2.005 30.438 1.00119.35 O
ATOM 2 P C A 30 -22.227 3.337 30.206 1.00116.81 P
ATOM 3 OP1 C A 30 -23.661 2.996 30.354 1.00120.42 O
ATOM 4 OP2 C A 30 -21.771 3.875 28.907 1.00107.34 O
ATOM 5 O5' C A 30 -21.734 4.270 31.402 1.00 94.43 O
ATOM 6 C5' C A 30 -21.779 3.904 32.778 1.00 91.02 C
ATOM 7 C4' C A 30 -20.985 4.862 33.635 1.00 90.18 C
ATOM 8 O4' C A 30 -19.570 4.726 33.339 1.00 86.67 O
ATOM 9 C3' C A 30 -21.263 6.336 33.393 1.00 89.10 C
ATOM 10 O3' C A 30 -22.410 6.812 34.070 1.00 91.94 O
ATOM 11 C2' C A 30 -19.969 7.005 33.834 1.00 79.95 C
ATOM 12 O2' C A 30 -19.885 7.068 35.246 1.00 82.05 O
ATOM 13 C1' C A 30 -18.938 5.991 33.354 1.00 79.09 C
ATOM 14 N1 C A 30 -18.444 6.341 32.002 1.00 80.05 N
ATOM 15 C2 C A 30 -17.527 7.383 31.858 1.00 73.79 C
ATOM 16 O2 C A 30 -17.149 7.982 32.871 1.00 69.36 O
ATOM 17 N3 C A 30 -17.074 7.716 30.627 1.00 73.55 N
ATOM 18 C4 C A 30 -17.500 7.045 29.558 1.00 79.88 C
ATOM 19 N4 C A 30 -17.033 7.392 28.353 1.00 80.29 N
ATOM 20 C5 C A 30 -18.438 5.985 29.676 1.00 87.32 C
ATOM 21 C6 C A 30 -18.874 5.669 30.899 1.00 86.31 C
ATOM 22 P U A 31 -23.314 7.972 33.410 1.00 93.44 P
ATOM 23 OP1 U A 31 -24.419 8.204 34.373 1.00 91.98 O
ATOM 24 OP2 U A 31 -23.632 7.577 32.019 1.00 85.69 O
ATOM 25 O5' U A 31 -22.347 9.233 33.406 1.00 86.73 O
TER
ATOM 1 O3' C B 30 -22.410 6.812 34.070 1.00 91.94 O
ATOM 2 P U B 31 -23.314 7.972 33.410 1.00 93.44 P
ATOM 3 OP1 U B 31 -24.419 8.204 34.373 1.00 91.98 O
ATOM 4 OP2 U B 31 -23.632 7.577 32.019 1.00 85.69 O
ATOM 5 O5' U B 31 -22.347 9.233 33.406 1.00 86.73 O
ATOM 6 C5' U B 31 -21.933 9.843 34.619 1.00 83.51 C
ATOM 7 C4' U B 31 -20.812 10.817 34.373 1.00 80.03 C
ATOM 8 O4' U B 31 -19.693 10.119 33.769 1.00 80.15 O
ATOM 9 C3' U B 31 -21.107 11.932 33.387 1.00 77.83 C
ATOM 10 O3' U B 31 -21.853 12.990 33.957 1.00 82.94 O
ATOM 11 C2' U B 31 -19.710 12.335 32.946 1.00 68.50 C
ATOM 12 O2' U B 31 -19.070 13.064 33.980 1.00 69.26 O
ATOM 13 C1' U B 31 -19.026 10.974 32.866 1.00 69.60 C
ATOM 14 N1 U B 31 -19.033 10.418 31.490 1.00 70.22 N
ATOM 15 C2 U B 31 -18.005 10.824 30.657 1.00 67.46 C
ATOM 16 O2 U B 31 -17.143 11.597 31.038 1.00 63.60 O
ATOM 17 N3 U B 31 -18.025 10.307 29.382 1.00 71.05 N
ATOM 18 C4 U B 31 -18.968 9.437 28.876 1.00 77.72 C
ATOM 19 O4 U B 31 -18.864 9.049 27.714 1.00 81.88 O
ATOM 20 C5 U B 31 -19.996 9.051 29.797 1.00 80.37 C
ATOM 21 C6 U B 31 -19.995 9.543 31.042 1.00 76.44 C
ATOM 22 P A B 32 -22.910 13.766 33.036 1.00 92.64 P
ATOM 23 OP1 A B 32 -23.637 14.709 33.912 1.00 82.03 O
ATOM 24 OP2 A B 32 -23.639 12.749 32.251 1.00 85.75 O
ATOM 25 O5' A B 32 -21.985 14.605 32.080 1.00 77.55 O
TER
ATOM 2 P C A 30 -22.227 3.337 30.206 1.00116.81 P
ATOM 3 OP1 C A 30 -23.661 2.996 30.354 1.00120.42 O
ATOM 4 OP2 C A 30 -21.771 3.875 28.907 1.00107.34 O
ATOM 5 O5' C A 30 -21.734 4.270 31.402 1.00 94.43 O
ATOM 6 C5' C A 30 -21.779 3.904 32.778 1.00 91.02 C
ATOM 7 C4' C A 30 -20.985 4.862 33.635 1.00 90.18 C
ATOM 8 O4' C A 30 -19.570 4.726 33.339 1.00 86.67 O
ATOM 9 C3' C A 30 -21.263 6.336 33.393 1.00 89.10 C
ATOM 10 O3' C A 30 -22.410 6.812 34.070 1.00 91.94 O
ATOM 11 C2' C A 30 -19.969 7.005 33.834 1.00 79.95 C
ATOM 12 O2' C A 30 -19.885 7.068 35.246 1.00 82.05 O
ATOM 13 C1' C A 30 -18.938 5.991 33.354 1.00 79.09 C
ATOM 14 N1 C A 30 -18.444 6.341 32.002 1.00 80.05 N
ATOM 15 C2 C A 30 -17.527 7.383 31.858 1.00 73.79 C
ATOM 16 O2 C A 30 -17.149 7.982 32.871 1.00 69.36 O
ATOM 17 N3 C A 30 -17.074 7.716 30.627 1.00 73.55 N
ATOM 18 C4 C A 30 -17.500 7.045 29.558 1.00 79.88 C
ATOM 19 N4 C A 30 -17.033 7.392 28.353 1.00 80.29 N
ATOM 20 C5 C A 30 -18.438 5.985 29.676 1.00 87.32 C
ATOM 21 C6 C A 30 -18.874 5.669 30.899 1.00 86.31 C
ATOM 22 P U A 31 -23.314 7.972 33.410 1.00 93.44 P
ATOM 23 OP1 U A 31 -24.419 8.204 34.373 1.00 91.98 O
ATOM 24 OP2 U A 31 -23.632 7.577 32.019 1.00 85.69 O
ATOM 25 O5' U A 31 -22.347 9.233 33.406 1.00 86.73 O
TER
ATOM 1 O3' C B 30 -22.410 6.812 34.070 1.00 91.94 O
ATOM 2 P U B 31 -23.314 7.972 33.410 1.00 93.44 P
ATOM 3 OP1 U B 31 -24.419 8.204 34.373 1.00 91.98 O
ATOM 4 OP2 U B 31 -23.632 7.577 32.019 1.00 85.69 O
ATOM 5 O5' U B 31 -22.347 9.233 33.406 1.00 86.73 O
ATOM 6 C5' U B 31 -21.933 9.843 34.619 1.00 83.51 C
ATOM 7 C4' U B 31 -20.812 10.817 34.373 1.00 80.03 C
ATOM 8 O4' U B 31 -19.693 10.119 33.769 1.00 80.15 O
ATOM 9 C3' U B 31 -21.107 11.932 33.387 1.00 77.83 C
ATOM 10 O3' U B 31 -21.853 12.990 33.957 1.00 82.94 O
ATOM 11 C2' U B 31 -19.710 12.335 32.946 1.00 68.50 C
ATOM 12 O2' U B 31 -19.070 13.064 33.980 1.00 69.26 O
ATOM 13 C1' U B 31 -19.026 10.974 32.866 1.00 69.60 C
ATOM 14 N1 U B 31 -19.033 10.418 31.490 1.00 70.22 N
ATOM 15 C2 U B 31 -18.005 10.824 30.657 1.00 67.46 C
ATOM 16 O2 U B 31 -17.143 11.597 31.038 1.00 63.60 O
ATOM 17 N3 U B 31 -18.025 10.307 29.382 1.00 71.05 N
ATOM 18 C4 U B 31 -18.968 9.437 28.876 1.00 77.72 C
ATOM 19 O4 U B 31 -18.864 9.049 27.714 1.00 81.88 O
ATOM 20 C5 U B 31 -19.996 9.051 29.797 1.00 80.37 C
ATOM 21 C6 U B 31 -19.995 9.543 31.042 1.00 76.44 C
ATOM 22 P A B 32 -22.910 13.766 33.036 1.00 92.64 P
ATOM 23 OP1 A B 32 -23.637 14.709 33.912 1.00 82.03 O
ATOM 24 OP2 A B 32 -23.639 12.749 32.251 1.00 85.75 O
ATOM 25 O5' A B 32 -21.985 14.605 32.080 1.00 77.55 O
TER
Atoms:
C2: (-17.527,7.383,31.858)
OP1: (-23.661,2.996,30.354)
OP2: (-21.771,3.875,28.907)
C4: (-17.500,7.045,29.558)
O5': (-21.734,4.270,31.402)
C3': (-21.263,6.336,33.393)
C1': (-18.938,5.991,33.354)
O4': (-19.570,4.726,33.339)
C5': (-21.779,3.904,32.778)
P: (-22.227,3.337,30.206)
O2: (-17.149,7.982,32.871)
C4': (-20.985,4.862,33.635)
C2': (-19.969,7.005,33.834)
O2': (-19.885,7.068,35.246)
N1: (-18.444,6.341,32.002)
N3: (-17.074,7.716,30.627)
N4: (-17.033,7.392,28.353)
C6: (-18.874,5.669,30.899)
C5: (-18.438,5.985,29.676)
O3': (-22.410,6.812,34.070)
OP1: (-23.661,2.996,30.354)
OP2: (-21.771,3.875,28.907)
C4: (-17.500,7.045,29.558)
O5': (-21.734,4.270,31.402)
C3': (-21.263,6.336,33.393)
C1': (-18.938,5.991,33.354)
O4': (-19.570,4.726,33.339)
C5': (-21.779,3.904,32.778)
P: (-22.227,3.337,30.206)
O2: (-17.149,7.982,32.871)
C4': (-20.985,4.862,33.635)
C2': (-19.969,7.005,33.834)
O2': (-19.885,7.068,35.246)
N1: (-18.444,6.341,32.002)
N3: (-17.074,7.716,30.627)
N4: (-17.033,7.392,28.353)
C6: (-18.874,5.669,30.899)
C5: (-18.438,5.985,29.676)
O3': (-22.410,6.812,34.070)
C4: (-18.968,9.437,28.876)
N3: (-18.025,10.307,29.382)
OP1: (-24.419,8.204,34.373)
OP2: (-23.632,7.577,32.019)
C2: (-18.005,10.824,30.657)
C1': (-19.026,10.974,32.866)
C3': (-21.107,11.932,33.387)
O5': (-22.347,9.233,33.406)
O4': (-19.693,10.119,33.769)
C5': (-21.933,9.843,34.619)
P: (-23.314,7.972,33.410)
C4': (-20.812,10.817,34.373)
C2': (-19.710,12.335,32.946)
O2': (-19.070,13.064,33.980)
N1: (-19.033,10.418,31.490)
O4: (-18.864,9.049,27.714)
O2: (-17.143,11.597,31.038)
C6: (-19.995,9.543,31.042)
C5: (-19.996,9.051,29.797)
O3': (-21.853,12.990,33.957)
N3: (-18.025,10.307,29.382)
OP1: (-24.419,8.204,34.373)
OP2: (-23.632,7.577,32.019)
C2: (-18.005,10.824,30.657)
C1': (-19.026,10.974,32.866)
C3': (-21.107,11.932,33.387)
O5': (-22.347,9.233,33.406)
O4': (-19.693,10.119,33.769)
C5': (-21.933,9.843,34.619)
P: (-23.314,7.972,33.410)
C4': (-20.812,10.817,34.373)
C2': (-19.710,12.335,32.946)
O2': (-19.070,13.064,33.980)
N1: (-19.033,10.418,31.490)
O4: (-18.864,9.049,27.714)
O2: (-17.143,11.597,31.038)
C6: (-19.995,9.543,31.042)
C5: (-19.996,9.051,29.797)
O3': (-21.853,12.990,33.957)
Image (generated by PyMOL):