Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A264:A265
Extra
PDB:
ATOM 1 O3' G A 263 86.327 103.884 -5.157 1.00 69.92 O
ATOM 2 P C A 264 86.101 103.637 -6.725 1.00 69.71 P
ATOM 3 OP1 C A 264 86.310 104.948 -7.394 1.00 68.95 O
ATOM 4 OP2 C A 264 84.798 102.933 -6.879 1.00 69.56 O
ATOM 5 O5' C A 264 87.287 102.638 -7.122 1.00 71.54 O
ATOM 6 C5' C A 264 88.667 103.092 -7.121 1.00 75.00 C
ATOM 7 C4' C A 264 89.612 101.956 -7.457 1.00 77.01 C
ATOM 8 O4' C A 264 89.529 100.931 -6.425 1.00 77.59 O
ATOM 9 C3' C A 264 89.348 101.207 -8.758 1.00 79.11 C
ATOM 10 O3' C A 264 89.882 101.879 -9.900 1.00 81.91 O
ATOM 11 C2' C A 264 90.019 99.862 -8.496 1.00 78.75 C
ATOM 12 O2' C A 264 91.429 99.873 -8.656 1.00 78.49 O
ATOM 13 C1' C A 264 89.670 99.644 -7.018 1.00 78.24 C
ATOM 14 N1 C A 264 88.416 98.888 -6.788 1.00 77.73 N
ATOM 15 C2 C A 264 88.451 97.466 -6.800 1.00 77.96 C
ATOM 16 O2 C A 264 89.527 96.886 -7.040 1.00 78.54 O
ATOM 17 N3 C A 264 87.308 96.775 -6.552 1.00 77.06 N
ATOM 18 C4 C A 264 86.170 97.437 -6.304 1.00 77.00 C
ATOM 19 N4 C A 264 85.073 96.723 -6.035 1.00 76.05 N
ATOM 20 C5 C A 264 86.105 98.868 -6.312 1.00 76.71 C
ATOM 21 C6 C A 264 87.236 99.545 -6.556 1.00 76.84 C
ATOM 22 P U A 265 89.050 101.893 -11.289 1.00 84.46 P
ATOM 23 OP1 U A 265 89.787 102.826 -12.193 1.00 84.49 O
ATOM 24 OP2 U A 265 87.606 102.138 -11.008 1.00 83.16 O
ATOM 25 O5' U A 265 89.188 100.405 -11.858 1.00 85.17 O
TER
ATOM 1 O3' C B 264 89.882 101.879 -9.900 1.00 81.91 O
ATOM 2 P U B 265 89.050 101.893 -11.289 1.00 84.46 P
ATOM 3 OP1 U B 265 89.787 102.826 -12.193 1.00 84.49 O
ATOM 4 OP2 U B 265 87.606 102.138 -11.008 1.00 83.16 O
ATOM 5 O5' U B 265 89.188 100.405 -11.858 1.00 85.17 O
ATOM 6 C5' U B 265 90.482 99.871 -12.248 1.00 87.81 C
ATOM 7 C4' U B 265 90.362 98.420 -12.681 1.00 89.08 C
ATOM 8 O4' U B 265 90.158 97.541 -11.537 1.00 89.01 O
ATOM 9 C3' U B 265 89.201 98.084 -13.601 1.00 90.01 C
ATOM 10 O3' U B 265 89.424 98.486 -14.942 1.00 91.40 O
ATOM 11 C2' U B 265 89.083 96.574 -13.425 1.00 89.52 C
ATOM 12 O2' U B 265 90.043 95.824 -14.148 1.00 90.15 O
ATOM 13 C1' U B 265 89.349 96.437 -11.926 1.00 89.03 C
ATOM 14 N1 U B 265 88.093 96.471 -11.162 1.00 89.26 N
ATOM 15 C2 U B 265 87.441 95.268 -10.913 1.00 89.64 C
ATOM 16 O2 U B 265 87.860 94.186 -11.290 1.00 89.90 O
ATOM 17 N3 U B 265 86.266 95.382 -10.209 1.00 89.71 N
ATOM 18 C4 U B 265 85.682 96.543 -9.749 1.00 89.60 C
ATOM 19 O4 U B 265 84.609 96.482 -9.146 1.00 89.27 O
ATOM 20 C5 U B 265 86.415 97.739 -10.046 1.00 89.87 C
ATOM 21 C6 U B 265 87.565 97.662 -10.719 1.00 89.58 C
ATOM 22 P A B 266 88.165 98.744 -15.900 1.00 92.57 P
ATOM 23 OP1 A B 266 88.722 99.096 -17.232 1.00 93.19 O
ATOM 24 OP2 A B 266 87.202 99.667 -15.238 1.00 92.33 O
ATOM 25 O5' A B 266 87.478 97.310 -16.005 1.00 93.94 O
TER
ATOM 2 P C A 264 86.101 103.637 -6.725 1.00 69.71 P
ATOM 3 OP1 C A 264 86.310 104.948 -7.394 1.00 68.95 O
ATOM 4 OP2 C A 264 84.798 102.933 -6.879 1.00 69.56 O
ATOM 5 O5' C A 264 87.287 102.638 -7.122 1.00 71.54 O
ATOM 6 C5' C A 264 88.667 103.092 -7.121 1.00 75.00 C
ATOM 7 C4' C A 264 89.612 101.956 -7.457 1.00 77.01 C
ATOM 8 O4' C A 264 89.529 100.931 -6.425 1.00 77.59 O
ATOM 9 C3' C A 264 89.348 101.207 -8.758 1.00 79.11 C
ATOM 10 O3' C A 264 89.882 101.879 -9.900 1.00 81.91 O
ATOM 11 C2' C A 264 90.019 99.862 -8.496 1.00 78.75 C
ATOM 12 O2' C A 264 91.429 99.873 -8.656 1.00 78.49 O
ATOM 13 C1' C A 264 89.670 99.644 -7.018 1.00 78.24 C
ATOM 14 N1 C A 264 88.416 98.888 -6.788 1.00 77.73 N
ATOM 15 C2 C A 264 88.451 97.466 -6.800 1.00 77.96 C
ATOM 16 O2 C A 264 89.527 96.886 -7.040 1.00 78.54 O
ATOM 17 N3 C A 264 87.308 96.775 -6.552 1.00 77.06 N
ATOM 18 C4 C A 264 86.170 97.437 -6.304 1.00 77.00 C
ATOM 19 N4 C A 264 85.073 96.723 -6.035 1.00 76.05 N
ATOM 20 C5 C A 264 86.105 98.868 -6.312 1.00 76.71 C
ATOM 21 C6 C A 264 87.236 99.545 -6.556 1.00 76.84 C
ATOM 22 P U A 265 89.050 101.893 -11.289 1.00 84.46 P
ATOM 23 OP1 U A 265 89.787 102.826 -12.193 1.00 84.49 O
ATOM 24 OP2 U A 265 87.606 102.138 -11.008 1.00 83.16 O
ATOM 25 O5' U A 265 89.188 100.405 -11.858 1.00 85.17 O
TER
ATOM 1 O3' C B 264 89.882 101.879 -9.900 1.00 81.91 O
ATOM 2 P U B 265 89.050 101.893 -11.289 1.00 84.46 P
ATOM 3 OP1 U B 265 89.787 102.826 -12.193 1.00 84.49 O
ATOM 4 OP2 U B 265 87.606 102.138 -11.008 1.00 83.16 O
ATOM 5 O5' U B 265 89.188 100.405 -11.858 1.00 85.17 O
ATOM 6 C5' U B 265 90.482 99.871 -12.248 1.00 87.81 C
ATOM 7 C4' U B 265 90.362 98.420 -12.681 1.00 89.08 C
ATOM 8 O4' U B 265 90.158 97.541 -11.537 1.00 89.01 O
ATOM 9 C3' U B 265 89.201 98.084 -13.601 1.00 90.01 C
ATOM 10 O3' U B 265 89.424 98.486 -14.942 1.00 91.40 O
ATOM 11 C2' U B 265 89.083 96.574 -13.425 1.00 89.52 C
ATOM 12 O2' U B 265 90.043 95.824 -14.148 1.00 90.15 O
ATOM 13 C1' U B 265 89.349 96.437 -11.926 1.00 89.03 C
ATOM 14 N1 U B 265 88.093 96.471 -11.162 1.00 89.26 N
ATOM 15 C2 U B 265 87.441 95.268 -10.913 1.00 89.64 C
ATOM 16 O2 U B 265 87.860 94.186 -11.290 1.00 89.90 O
ATOM 17 N3 U B 265 86.266 95.382 -10.209 1.00 89.71 N
ATOM 18 C4 U B 265 85.682 96.543 -9.749 1.00 89.60 C
ATOM 19 O4 U B 265 84.609 96.482 -9.146 1.00 89.27 O
ATOM 20 C5 U B 265 86.415 97.739 -10.046 1.00 89.87 C
ATOM 21 C6 U B 265 87.565 97.662 -10.719 1.00 89.58 C
ATOM 22 P A B 266 88.165 98.744 -15.900 1.00 92.57 P
ATOM 23 OP1 A B 266 88.722 99.096 -17.232 1.00 93.19 O
ATOM 24 OP2 A B 266 87.202 99.667 -15.238 1.00 92.33 O
ATOM 25 O5' A B 266 87.478 97.310 -16.005 1.00 93.94 O
TER
Atoms:
C2: (88.451,97.466,-6.800)
OP1: (86.310,104.948,-7.394)
OP2: (84.798,102.933,-6.879)
C4: (86.170,97.437,-6.304)
O5': (87.287,102.638,-7.122)
C3': (89.348,101.207,-8.758)
C1': (89.670,99.644,-7.018)
O4': (89.529,100.931,-6.425)
C5': (88.667,103.092,-7.121)
P: (86.101,103.637,-6.725)
O2: (89.527,96.886,-7.040)
C4': (89.612,101.956,-7.457)
C2': (90.019,99.862,-8.496)
O2': (91.429,99.873,-8.656)
N1: (88.416,98.888,-6.788)
N3: (87.308,96.775,-6.552)
N4: (85.073,96.723,-6.035)
C6: (87.236,99.545,-6.556)
C5: (86.105,98.868,-6.312)
O3': (89.882,101.879,-9.900)
OP1: (86.310,104.948,-7.394)
OP2: (84.798,102.933,-6.879)
C4: (86.170,97.437,-6.304)
O5': (87.287,102.638,-7.122)
C3': (89.348,101.207,-8.758)
C1': (89.670,99.644,-7.018)
O4': (89.529,100.931,-6.425)
C5': (88.667,103.092,-7.121)
P: (86.101,103.637,-6.725)
O2: (89.527,96.886,-7.040)
C4': (89.612,101.956,-7.457)
C2': (90.019,99.862,-8.496)
O2': (91.429,99.873,-8.656)
N1: (88.416,98.888,-6.788)
N3: (87.308,96.775,-6.552)
N4: (85.073,96.723,-6.035)
C6: (87.236,99.545,-6.556)
C5: (86.105,98.868,-6.312)
O3': (89.882,101.879,-9.900)
C4: (85.682,96.543,-9.749)
N3: (86.266,95.382,-10.209)
OP1: (89.787,102.826,-12.193)
OP2: (87.606,102.138,-11.008)
C2: (87.441,95.268,-10.913)
C1': (89.349,96.437,-11.926)
C3': (89.201,98.084,-13.601)
O5': (89.188,100.405,-11.858)
O4': (90.158,97.541,-11.537)
C5': (90.482,99.871,-12.248)
P: (89.050,101.893,-11.289)
C4': (90.362,98.420,-12.681)
C2': (89.083,96.574,-13.425)
O2': (90.043,95.824,-14.148)
N1: (88.093,96.471,-11.162)
O4: (84.609,96.482,-9.146)
O2: (87.860,94.186,-11.290)
C6: (87.565,97.662,-10.719)
C5: (86.415,97.739,-10.046)
O3': (89.424,98.486,-14.942)
N3: (86.266,95.382,-10.209)
OP1: (89.787,102.826,-12.193)
OP2: (87.606,102.138,-11.008)
C2: (87.441,95.268,-10.913)
C1': (89.349,96.437,-11.926)
C3': (89.201,98.084,-13.601)
O5': (89.188,100.405,-11.858)
O4': (90.158,97.541,-11.537)
C5': (90.482,99.871,-12.248)
P: (89.050,101.893,-11.289)
C4': (90.362,98.420,-12.681)
C2': (89.083,96.574,-13.425)
O2': (90.043,95.824,-14.148)
N1: (88.093,96.471,-11.162)
O4: (84.609,96.482,-9.146)
O2: (87.860,94.186,-11.290)
C6: (87.565,97.662,-10.719)
C5: (86.415,97.739,-10.046)
O3': (89.424,98.486,-14.942)
Image (generated by PyMOL):