Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0967:0968
Extra
PDB:
ATOM 1 O3' A A 966 67.890 67.635 105.799 1.00 45.99 O
ATOM 2 P C A 967 68.429 66.487 106.791 1.00 47.37 P
ATOM 3 OP1 C A 967 69.020 67.106 108.010 1.00 46.67 O
ATOM 4 OP2 C A 967 69.248 65.579 105.958 1.00 49.31 O
ATOM 5 O5' C A 967 67.130 65.649 107.185 1.00 46.80 O
ATOM 6 C5' C A 967 66.470 65.845 108.437 1.00 43.34 C
ATOM 7 C4' C A 967 66.526 64.581 109.262 1.00 44.35 C
ATOM 8 O4' C A 967 66.494 64.966 110.654 1.00 44.58 O
ATOM 9 C3' C A 967 65.402 63.559 109.087 1.00 43.76 C
ATOM 10 O3' C A 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 11 C2' C A 967 65.370 62.880 110.451 1.00 43.51 C
ATOM 12 O2' C A 967 66.372 61.889 110.551 1.00 41.59 O
ATOM 13 C1' C A 967 65.720 64.042 111.387 1.00 42.93 C
ATOM 14 N1 C A 967 64.596 64.779 111.992 1.00 41.41 N
ATOM 15 C2 C A 967 63.921 64.213 113.065 1.00 41.62 C
ATOM 16 O2 C A 967 64.240 63.075 113.443 1.00 42.60 O
ATOM 17 N3 C A 967 62.937 64.918 113.668 1.00 40.95 N
ATOM 18 C4 C A 967 62.623 66.138 113.228 1.00 40.84 C
ATOM 19 N4 C A 967 61.667 66.807 113.867 1.00 41.21 N
ATOM 20 C5 C A 967 63.276 66.725 112.117 1.00 40.96 C
ATOM 21 C6 C A 967 64.242 66.016 111.530 1.00 41.48 C
ATOM 22 P U A 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 23 OP1 U A 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 24 OP2 U A 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 25 O5' U A 968 63.707 61.012 108.431 1.00 44.76 O
TER
ATOM 1 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 2 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 3 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 4 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 5 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
ATOM 6 C5' U B 968 64.316 59.863 109.041 1.00 47.10 C
ATOM 7 C4' U B 968 63.345 59.194 109.991 1.00 47.63 C
ATOM 8 O4' U B 968 62.910 60.163 110.985 1.00 47.38 O
ATOM 9 C3' U B 968 62.072 58.622 109.375 1.00 47.41 C
ATOM 10 O3' U B 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 11 C2' U B 968 61.064 59.745 109.598 1.00 46.45 C
ATOM 12 O2' U B 968 59.728 59.296 109.684 1.00 44.75 O
ATOM 13 C1' U B 968 61.505 60.280 110.954 1.00 46.15 C
ATOM 14 N1 U B 968 61.145 61.688 111.166 1.00 47.07 N
ATOM 15 C2 U B 968 60.075 61.958 111.996 1.00 48.13 C
ATOM 16 O2 U B 968 59.423 61.087 112.544 1.00 48.40 O
ATOM 17 N3 U B 968 59.791 63.291 112.159 1.00 49.13 N
ATOM 18 C4 U B 968 60.450 64.357 111.586 1.00 48.86 C
ATOM 19 O4 U B 968 60.058 65.502 111.813 1.00 48.94 O
ATOM 20 C5 U B 968 61.544 63.996 110.740 1.00 48.54 C
ATOM 21 C6 U B 968 61.846 62.707 110.563 1.00 47.32 C
ATOM 22 P C B 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 23 OP1 C B 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 24 OP2 C B 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 25 O5' C B 969 60.860 55.183 110.552 1.00 52.14 O
TER
ATOM 2 P C A 967 68.429 66.487 106.791 1.00 47.37 P
ATOM 3 OP1 C A 967 69.020 67.106 108.010 1.00 46.67 O
ATOM 4 OP2 C A 967 69.248 65.579 105.958 1.00 49.31 O
ATOM 5 O5' C A 967 67.130 65.649 107.185 1.00 46.80 O
ATOM 6 C5' C A 967 66.470 65.845 108.437 1.00 43.34 C
ATOM 7 C4' C A 967 66.526 64.581 109.262 1.00 44.35 C
ATOM 8 O4' C A 967 66.494 64.966 110.654 1.00 44.58 O
ATOM 9 C3' C A 967 65.402 63.559 109.087 1.00 43.76 C
ATOM 10 O3' C A 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 11 C2' C A 967 65.370 62.880 110.451 1.00 43.51 C
ATOM 12 O2' C A 967 66.372 61.889 110.551 1.00 41.59 O
ATOM 13 C1' C A 967 65.720 64.042 111.387 1.00 42.93 C
ATOM 14 N1 C A 967 64.596 64.779 111.992 1.00 41.41 N
ATOM 15 C2 C A 967 63.921 64.213 113.065 1.00 41.62 C
ATOM 16 O2 C A 967 64.240 63.075 113.443 1.00 42.60 O
ATOM 17 N3 C A 967 62.937 64.918 113.668 1.00 40.95 N
ATOM 18 C4 C A 967 62.623 66.138 113.228 1.00 40.84 C
ATOM 19 N4 C A 967 61.667 66.807 113.867 1.00 41.21 N
ATOM 20 C5 C A 967 63.276 66.725 112.117 1.00 40.96 C
ATOM 21 C6 C A 967 64.242 66.016 111.530 1.00 41.48 C
ATOM 22 P U A 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 23 OP1 U A 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 24 OP2 U A 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 25 O5' U A 968 63.707 61.012 108.431 1.00 44.76 O
TER
ATOM 1 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 2 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 3 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 4 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 5 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
ATOM 6 C5' U B 968 64.316 59.863 109.041 1.00 47.10 C
ATOM 7 C4' U B 968 63.345 59.194 109.991 1.00 47.63 C
ATOM 8 O4' U B 968 62.910 60.163 110.985 1.00 47.38 O
ATOM 9 C3' U B 968 62.072 58.622 109.375 1.00 47.41 C
ATOM 10 O3' U B 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 11 C2' U B 968 61.064 59.745 109.598 1.00 46.45 C
ATOM 12 O2' U B 968 59.728 59.296 109.684 1.00 44.75 O
ATOM 13 C1' U B 968 61.505 60.280 110.954 1.00 46.15 C
ATOM 14 N1 U B 968 61.145 61.688 111.166 1.00 47.07 N
ATOM 15 C2 U B 968 60.075 61.958 111.996 1.00 48.13 C
ATOM 16 O2 U B 968 59.423 61.087 112.544 1.00 48.40 O
ATOM 17 N3 U B 968 59.791 63.291 112.159 1.00 49.13 N
ATOM 18 C4 U B 968 60.450 64.357 111.586 1.00 48.86 C
ATOM 19 O4 U B 968 60.058 65.502 111.813 1.00 48.94 O
ATOM 20 C5 U B 968 61.544 63.996 110.740 1.00 48.54 C
ATOM 21 C6 U B 968 61.846 62.707 110.563 1.00 47.32 C
ATOM 22 P C B 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 23 OP1 C B 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 24 OP2 C B 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 25 O5' C B 969 60.860 55.183 110.552 1.00 52.14 O
TER
Atoms:
C2: (63.921,64.213,113.065)
OP1: (69.020,67.106,108.010)
OP2: (69.248,65.579,105.958)
C4: (62.623,66.138,113.228)
O5': (67.130,65.649,107.185)
C3': (65.402,63.559,109.087)
C1': (65.720,64.042,111.387)
O4': (66.494,64.966,110.654)
C5': (66.470,65.845,108.437)
P: (68.429,66.487,106.791)
O2: (64.240,63.075,113.443)
C4': (66.526,64.581,109.262)
C2': (65.370,62.880,110.451)
O2': (66.372,61.889,110.551)
N1: (64.596,64.779,111.992)
N3: (62.937,64.918,113.668)
N4: (61.667,66.807,113.867)
C6: (64.242,66.016,111.530)
C5: (63.276,66.725,112.117)
O3': (65.676,62.594,108.060)
OP1: (69.020,67.106,108.010)
OP2: (69.248,65.579,105.958)
C4: (62.623,66.138,113.228)
O5': (67.130,65.649,107.185)
C3': (65.402,63.559,109.087)
C1': (65.720,64.042,111.387)
O4': (66.494,64.966,110.654)
C5': (66.470,65.845,108.437)
P: (68.429,66.487,106.791)
O2: (64.240,63.075,113.443)
C4': (66.526,64.581,109.262)
C2': (65.370,62.880,110.451)
O2': (66.372,61.889,110.551)
N1: (64.596,64.779,111.992)
N3: (62.937,64.918,113.668)
N4: (61.667,66.807,113.867)
C6: (64.242,66.016,111.530)
C5: (63.276,66.725,112.117)
O3': (65.676,62.594,108.060)
C4: (60.450,64.357,111.586)
N3: (59.791,63.291,112.159)
OP1: (65.036,60.878,106.331)
OP2: (63.510,62.874,106.835)
C2: (60.075,61.958,111.996)
C1': (61.505,60.280,110.954)
C3': (62.072,58.622,109.375)
O5': (63.707,61.012,108.431)
O4': (62.910,60.163,110.985)
C5': (64.316,59.863,109.041)
P: (64.462,61.841,107.303)
C4': (63.345,59.194,109.991)
C2': (61.064,59.745,109.598)
O2': (59.728,59.296,109.684)
N1: (61.145,61.688,111.166)
O4: (60.058,65.502,111.813)
O2: (59.423,61.087,112.544)
C6: (61.846,62.707,110.563)
C5: (61.544,63.996,110.740)
O3': (61.681,57.490,110.134)
N3: (59.791,63.291,112.159)
OP1: (65.036,60.878,106.331)
OP2: (63.510,62.874,106.835)
C2: (60.075,61.958,111.996)
C1': (61.505,60.280,110.954)
C3': (62.072,58.622,109.375)
O5': (63.707,61.012,108.431)
O4': (62.910,60.163,110.985)
C5': (64.316,59.863,109.041)
P: (64.462,61.841,107.303)
C4': (63.345,59.194,109.991)
C2': (61.064,59.745,109.598)
O2': (59.728,59.296,109.684)
N1: (61.145,61.688,111.166)
O4: (60.058,65.502,111.813)
O2: (59.423,61.087,112.544)
C6: (61.846,62.707,110.563)
C5: (61.544,63.996,110.740)
O3': (61.681,57.490,110.134)
Image (generated by PyMOL):