ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A876:A877

Extra

PDB:
ATOM 1 O3' G A 875 168.778 89.686 -38.577 1.00 27.86 O
ATOM 2 P C A 876 168.233 90.042 -37.110 1.00 28.58 P
ATOM 3 OP1 C A 876 168.198 91.529 -37.052 1.00 29.61 O
ATOM 4 OP2 C A 876 168.982 89.245 -36.108 1.00 26.83 O
ATOM 5 O5' C A 876 166.731 89.544 -37.115 1.00 29.97 O
ATOM 6 C5' C A 876 165.753 90.183 -37.948 1.00 30.39 C
ATOM 7 C4' C A 876 164.451 89.439 -37.883 1.00 30.06 C
ATOM 8 O4' C A 876 164.622 88.107 -38.428 1.00 30.42 O
ATOM 9 C3' C A 876 163.909 89.191 -36.492 1.00 31.03 C
ATOM 10 O3' C A 876 163.234 90.301 -35.985 1.00 31.69 O
ATOM 11 C2' C A 876 162.985 87.998 -36.706 1.00 32.17 C
ATOM 12 O2' C A 876 161.701 88.360 -37.187 1.00 31.06 O
ATOM 13 C1' C A 876 163.754 87.203 -37.765 1.00 31.32 C
ATOM 14 N1 C A 876 164.549 86.116 -37.154 1.00 30.87 N
ATOM 15 C2 C A 876 163.908 84.906 -36.864 1.00 32.34 C
ATOM 16 O2 C A 876 162.719 84.768 -37.175 1.00 35.20 O
ATOM 17 N3 C A 876 164.595 83.920 -36.253 1.00 32.06 N
ATOM 18 C4 C A 876 165.872 84.101 -35.936 1.00 29.68 C
ATOM 19 N4 C A 876 166.497 83.107 -35.314 1.00 27.80 N
ATOM 20 C5 C A 876 166.561 85.309 -36.240 1.00 29.04 C
ATOM 21 C6 C A 876 165.869 86.281 -36.846 1.00 30.05 C
ATOM 22 P U A 877 163.348 90.639 -34.423 1.00 30.51 P
ATOM 23 OP1 U A 877 162.649 91.947 -34.254 1.00 31.63 O
ATOM 24 OP2 U A 877 164.757 90.513 -34.011 1.00 31.51 O
ATOM 25 O5' U A 877 162.509 89.487 -33.726 1.00 30.70 O
TER

ATOM 1 O3' C B 876 163.234 90.301 -35.985 1.00 31.69 O
ATOM 2 P U B 877 163.348 90.639 -34.423 1.00 30.51 P
ATOM 3 OP1 U B 877 162.649 91.947 -34.254 1.00 31.63 O
ATOM 4 OP2 U B 877 164.757 90.513 -34.011 1.00 31.51 O
ATOM 5 O5' U B 877 162.509 89.487 -33.726 1.00 30.70 O
ATOM 6 C5' U B 877 161.101 89.359 -33.973 1.00 31.03 C
ATOM 7 C4' U B 877 160.577 88.072 -33.394 1.00 31.46 C
ATOM 8 O4' U B 877 161.187 86.943 -34.067 1.00 33.23 O
ATOM 9 C3' U B 877 160.873 87.838 -31.926 1.00 31.73 C
ATOM 10 O3' U B 877 159.942 88.492 -31.115 1.00 31.58 O
ATOM 11 C2' U B 877 160.768 86.326 -31.802 1.00 33.30 C
ATOM 12 O2' U B 877 159.427 85.894 -31.643 1.00 33.04 O
ATOM 13 C1' U B 877 161.326 85.865 -33.155 1.00 34.13 C
ATOM 14 N1 U B 877 162.747 85.493 -33.075 1.00 36.17 N
ATOM 15 C2 U B 877 163.063 84.144 -32.954 1.00 37.10 C
ATOM 16 O2 U B 877 162.227 83.258 -32.987 1.00 36.41 O
ATOM 17 N3 U B 877 164.403 83.874 -32.799 1.00 38.09 N
ATOM 18 C4 U B 877 165.442 84.787 -32.768 1.00 38.30 C
ATOM 19 O4 U B 877 166.581 84.396 -32.514 1.00 39.20 O
ATOM 20 C5 U B 877 165.044 86.152 -32.946 1.00 38.27 C
ATOM 21 C6 U B 877 163.745 86.453 -33.089 1.00 37.90 C
ATOM 22 P G B 878 160.461 89.389 -29.891 1.00 30.54 P
ATOM 23 OP1 G B 878 159.255 89.818 -29.111 1.00 29.45 O
ATOM 24 OP2 G B 878 161.386 90.419 -30.461 1.00 27.83 O
ATOM 25 O5' G B 878 161.276 88.350 -29.016 1.00 29.28 O
TER

Atoms:
C2: (163.908,84.906,-36.864)
OP1: (168.198,91.529,-37.052)
OP2: (168.982,89.245,-36.108)
C4: (165.872,84.101,-35.936)
O5': (166.731,89.544,-37.115)
C3': (163.909,89.191,-36.492)
C1': (163.754,87.203,-37.765)
O4': (164.622,88.107,-38.428)
C5': (165.753,90.183,-37.948)
P: (168.233,90.042,-37.110)
O2: (162.719,84.768,-37.175)
C4': (164.451,89.439,-37.883)
C2': (162.985,87.998,-36.706)
O2': (161.701,88.360,-37.187)
N1: (164.549,86.116,-37.154)
N3: (164.595,83.920,-36.253)
N4: (166.497,83.107,-35.314)
C6: (165.869,86.281,-36.846)
C5: (166.561,85.309,-36.240)
O3': (163.234,90.301,-35.985)
C4: (165.442,84.787,-32.768)
N3: (164.403,83.874,-32.799)
OP1: (162.649,91.947,-34.254)
OP2: (164.757,90.513,-34.011)
C2: (163.063,84.144,-32.954)
C1': (161.326,85.865,-33.155)
C3': (160.873,87.838,-31.926)
O5': (162.509,89.487,-33.726)
O4': (161.187,86.943,-34.067)
C5': (161.101,89.359,-33.973)
P: (163.348,90.639,-34.423)
C4': (160.577,88.072,-33.394)
C2': (160.768,86.326,-31.802)
O2': (159.427,85.894,-31.643)
N1: (162.747,85.493,-33.075)
O4: (166.581,84.396,-32.514)
O2: (162.227,83.258,-32.987)
C6: (163.745,86.453,-33.089)
C5: (165.044,86.152,-32.946)
O3': (159.942,88.492,-31.115)
Image (generated by PyMOL):
PyMOL image
show in jmol