Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:052:053
Extra
PDB:
ATOM 1 O3' G A 51 53.296 153.730 48.309 1.00 49.37 O
ATOM 2 P C A 52 54.004 153.210 46.965 1.00 51.34 P
ATOM 3 OP1 C A 52 54.953 152.142 47.358 1.00 50.96 O
ATOM 4 OP2 C A 52 54.500 154.383 46.202 1.00 52.62 O
ATOM 5 O5' C A 52 52.810 152.546 46.145 1.00 50.98 O
ATOM 6 C5' C A 52 52.137 151.383 46.649 1.00 51.20 C
ATOM 7 C4' C A 52 50.971 151.026 45.767 1.00 52.16 C
ATOM 8 O4' C A 52 49.977 152.078 45.829 1.00 53.90 O
ATOM 9 C3' C A 52 51.252 150.892 44.284 1.00 52.35 C
ATOM 10 O3' C A 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 11 C2' C A 52 49.859 151.050 43.698 1.00 53.92 C
ATOM 12 O2' C A 52 49.066 149.891 43.844 1.00 52.84 O
ATOM 13 C1' C A 52 49.287 152.148 44.594 1.00 54.11 C
ATOM 14 N1 C A 52 49.481 153.488 44.015 1.00 55.73 N
ATOM 15 C2 C A 52 48.542 153.959 43.088 1.00 56.41 C
ATOM 16 O2 C A 52 47.571 153.241 42.795 1.00 56.34 O
ATOM 17 N3 C A 52 48.715 155.183 42.536 1.00 56.66 N
ATOM 18 C4 C A 52 49.766 155.925 42.878 1.00 56.00 C
ATOM 19 N4 C A 52 49.891 157.122 42.312 1.00 55.02 N
ATOM 20 C5 C A 52 50.736 155.472 43.819 1.00 57.07 C
ATOM 21 C6 C A 52 50.556 154.260 44.359 1.00 56.22 C
ATOM 22 P U A 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 23 OP1 U A 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 24 OP2 U A 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 25 O5' U A 53 51.766 149.873 41.453 1.00 56.24 O
TER
ATOM 1 O3' C B 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 2 P U B 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 3 OP1 U B 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 4 OP2 U B 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 5 O5' U B 53 51.766 149.873 41.453 1.00 56.24 O
ATOM 6 C5' U B 53 50.716 148.979 41.049 1.00 53.98 C
ATOM 7 C4' U B 53 49.946 149.568 39.894 1.00 53.00 C
ATOM 8 O4' U B 53 49.300 150.794 40.323 1.00 52.68 O
ATOM 9 C3' U B 53 50.782 150.001 38.705 1.00 52.21 C
ATOM 10 O3' U B 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 11 C2' U B 53 49.877 151.013 38.032 1.00 52.62 C
ATOM 12 O2' U B 53 48.847 150.375 37.312 1.00 54.00 O
ATOM 13 C1' U B 53 49.282 151.721 39.250 1.00 53.40 C
ATOM 14 N1 U B 53 50.037 152.919 39.655 1.00 53.81 N
ATOM 15 C2 U B 53 49.667 154.129 39.099 1.00 53.24 C
ATOM 16 O2 U B 53 48.753 154.238 38.299 1.00 53.15 O
ATOM 17 N3 U B 53 50.410 155.210 39.513 1.00 52.26 N
ATOM 18 C4 U B 53 51.461 155.204 40.403 1.00 52.18 C
ATOM 19 O4 U B 53 52.018 156.263 40.687 1.00 51.71 O
ATOM 20 C5 U B 53 51.785 153.919 40.937 1.00 53.35 C
ATOM 21 C6 U B 53 51.081 152.847 40.557 1.00 54.44 C
ATOM 22 P G B 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 23 OP1 G B 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 24 OP2 G B 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 25 O5' G B 54 52.250 150.076 35.937 1.00 53.12 O
TER
ATOM 2 P C A 52 54.004 153.210 46.965 1.00 51.34 P
ATOM 3 OP1 C A 52 54.953 152.142 47.358 1.00 50.96 O
ATOM 4 OP2 C A 52 54.500 154.383 46.202 1.00 52.62 O
ATOM 5 O5' C A 52 52.810 152.546 46.145 1.00 50.98 O
ATOM 6 C5' C A 52 52.137 151.383 46.649 1.00 51.20 C
ATOM 7 C4' C A 52 50.971 151.026 45.767 1.00 52.16 C
ATOM 8 O4' C A 52 49.977 152.078 45.829 1.00 53.90 O
ATOM 9 C3' C A 52 51.252 150.892 44.284 1.00 52.35 C
ATOM 10 O3' C A 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 11 C2' C A 52 49.859 151.050 43.698 1.00 53.92 C
ATOM 12 O2' C A 52 49.066 149.891 43.844 1.00 52.84 O
ATOM 13 C1' C A 52 49.287 152.148 44.594 1.00 54.11 C
ATOM 14 N1 C A 52 49.481 153.488 44.015 1.00 55.73 N
ATOM 15 C2 C A 52 48.542 153.959 43.088 1.00 56.41 C
ATOM 16 O2 C A 52 47.571 153.241 42.795 1.00 56.34 O
ATOM 17 N3 C A 52 48.715 155.183 42.536 1.00 56.66 N
ATOM 18 C4 C A 52 49.766 155.925 42.878 1.00 56.00 C
ATOM 19 N4 C A 52 49.891 157.122 42.312 1.00 55.02 N
ATOM 20 C5 C A 52 50.736 155.472 43.819 1.00 57.07 C
ATOM 21 C6 C A 52 50.556 154.260 44.359 1.00 56.22 C
ATOM 22 P U A 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 23 OP1 U A 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 24 OP2 U A 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 25 O5' U A 53 51.766 149.873 41.453 1.00 56.24 O
TER
ATOM 1 O3' C B 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 2 P U B 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 3 OP1 U B 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 4 OP2 U B 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 5 O5' U B 53 51.766 149.873 41.453 1.00 56.24 O
ATOM 6 C5' U B 53 50.716 148.979 41.049 1.00 53.98 C
ATOM 7 C4' U B 53 49.946 149.568 39.894 1.00 53.00 C
ATOM 8 O4' U B 53 49.300 150.794 40.323 1.00 52.68 O
ATOM 9 C3' U B 53 50.782 150.001 38.705 1.00 52.21 C
ATOM 10 O3' U B 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 11 C2' U B 53 49.877 151.013 38.032 1.00 52.62 C
ATOM 12 O2' U B 53 48.847 150.375 37.312 1.00 54.00 O
ATOM 13 C1' U B 53 49.282 151.721 39.250 1.00 53.40 C
ATOM 14 N1 U B 53 50.037 152.919 39.655 1.00 53.81 N
ATOM 15 C2 U B 53 49.667 154.129 39.099 1.00 53.24 C
ATOM 16 O2 U B 53 48.753 154.238 38.299 1.00 53.15 O
ATOM 17 N3 U B 53 50.410 155.210 39.513 1.00 52.26 N
ATOM 18 C4 U B 53 51.461 155.204 40.403 1.00 52.18 C
ATOM 19 O4 U B 53 52.018 156.263 40.687 1.00 51.71 O
ATOM 20 C5 U B 53 51.785 153.919 40.937 1.00 53.35 C
ATOM 21 C6 U B 53 51.081 152.847 40.557 1.00 54.44 C
ATOM 22 P G B 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 23 OP1 G B 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 24 OP2 G B 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 25 O5' G B 54 52.250 150.076 35.937 1.00 53.12 O
TER
Atoms:
C2: (48.542,153.959,43.088)
OP1: (54.953,152.142,47.358)
OP2: (54.500,154.383,46.202)
C4: (49.766,155.925,42.878)
O5': (52.810,152.546,46.145)
C3': (51.252,150.892,44.284)
C1': (49.287,152.148,44.594)
O4': (49.977,152.078,45.829)
C5': (52.137,151.383,46.649)
P: (54.004,153.210,46.965)
O2: (47.571,153.241,42.795)
C4': (50.971,151.026,45.767)
C2': (49.859,151.050,43.698)
O2': (49.066,149.891,43.844)
N1: (49.481,153.488,44.015)
N3: (48.715,155.183,42.536)
N4: (49.891,157.122,42.312)
C6: (50.556,154.260,44.359)
C5: (50.736,155.472,43.819)
O3': (51.815,149.636,43.958)
OP1: (54.953,152.142,47.358)
OP2: (54.500,154.383,46.202)
C4: (49.766,155.925,42.878)
O5': (52.810,152.546,46.145)
C3': (51.252,150.892,44.284)
C1': (49.287,152.148,44.594)
O4': (49.977,152.078,45.829)
C5': (52.137,151.383,46.649)
P: (54.004,153.210,46.965)
O2: (47.571,153.241,42.795)
C4': (50.971,151.026,45.767)
C2': (49.859,151.050,43.698)
O2': (49.066,149.891,43.844)
N1: (49.481,153.488,44.015)
N3: (48.715,155.183,42.536)
N4: (49.891,157.122,42.312)
C6: (50.556,154.260,44.359)
C5: (50.736,155.472,43.819)
O3': (51.815,149.636,43.958)
C4: (51.461,155.204,40.403)
N3: (50.410,155.210,39.513)
OP1: (53.100,148.060,42.531)
OP2: (53.822,150.513,42.688)
C2: (49.667,154.129,39.099)
C1': (49.282,151.721,39.250)
C3': (50.782,150.001,38.705)
O5': (51.766,149.873,41.453)
O4': (49.300,150.794,40.323)
C5': (50.716,148.979,41.049)
P: (52.743,149.496,42.652)
C4': (49.946,149.568,39.894)
C2': (49.877,151.013,38.032)
O2': (48.847,150.375,37.312)
N1: (50.037,152.919,39.655)
O4: (52.018,156.263,40.687)
O2: (48.753,154.238,38.299)
C6: (51.081,152.847,40.557)
C5: (51.785,153.919,40.937)
O3': (51.100,148.922,37.851)
N3: (50.410,155.210,39.513)
OP1: (53.100,148.060,42.531)
OP2: (53.822,150.513,42.688)
C2: (49.667,154.129,39.099)
C1': (49.282,151.721,39.250)
C3': (50.782,150.001,38.705)
O5': (51.766,149.873,41.453)
O4': (49.300,150.794,40.323)
C5': (50.716,148.979,41.049)
P: (52.743,149.496,42.652)
C4': (49.946,149.568,39.894)
C2': (49.877,151.013,38.032)
O2': (48.847,150.375,37.312)
N1: (50.037,152.919,39.655)
O4: (52.018,156.263,40.687)
O2: (48.753,154.238,38.299)
C6: (51.081,152.847,40.557)
C5: (51.785,153.919,40.937)
O3': (51.100,148.922,37.851)
Image (generated by PyMOL):