Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A238:A239
Extra
PDB:
ATOM 1 O3' G A 237 5.498 87.532 108.125 1.00 13.29 O
ATOM 2 P C A 238 6.453 87.048 109.330 1.00 64.88 P
ATOM 3 OP1 C A 238 5.570 86.830 110.511 1.00 46.01 O
ATOM 4 OP2 C A 238 7.608 87.977 109.438 1.00 45.44 O
ATOM 5 O5' C A 238 7.010 85.628 108.849 1.00 36.86 O
ATOM 6 C5' C A 238 6.118 84.493 108.723 1.00 36.79 C
ATOM 7 C4' C A 238 6.889 83.204 108.505 1.00 37.83 C
ATOM 8 O4' C A 238 7.491 83.169 107.181 1.00 37.52 O
ATOM 9 C3' C A 238 8.044 82.899 109.440 1.00 39.07 C
ATOM 10 O3' C A 238 7.641 82.369 110.688 1.00 40.40 O
ATOM 11 C2' C A 238 8.835 81.874 108.646 1.00 38.47 C
ATOM 12 O2' C A 238 8.253 80.590 108.752 1.00 42.11 O
ATOM 13 C1' C A 238 8.681 82.403 107.218 1.00 35.77 C
ATOM 14 N1 C A 238 9.806 83.277 106.850 1.00 37.69 N
ATOM 15 C2 C A 238 11.106 82.732 106.789 1.00 36.98 C
ATOM 16 O2 C A 238 11.269 81.523 107.018 1.00 37.52 O
ATOM 17 N3 C A 238 12.147 83.537 106.483 1.00 36.25 N
ATOM 18 C4 C A 238 11.934 84.828 106.238 1.00 35.72 C
ATOM 19 N4 C A 238 12.983 85.580 105.945 1.00 36.16 N
ATOM 20 C5 C A 238 10.631 85.404 106.282 1.00 35.45 C
ATOM 21 C6 C A 238 9.607 84.602 106.587 1.00 35.15 C
ATOM 22 P U A 239 8.561 82.630 111.968 1.00 36.06 P
ATOM 23 OP1 U A 239 7.826 82.124 113.149 1.00 33.24 O
ATOM 24 OP2 U A 239 8.976 84.051 111.923 1.00 33.41 O
ATOM 25 O5' U A 239 9.861 81.745 111.700 1.00 23.38 O
TER
ATOM 1 O3' C B 238 7.641 82.369 110.688 1.00 40.40 O
ATOM 2 P U B 239 8.561 82.630 111.968 1.00 36.06 P
ATOM 3 OP1 U B 239 7.826 82.124 113.149 1.00 33.24 O
ATOM 4 OP2 U B 239 8.976 84.051 111.923 1.00 33.41 O
ATOM 5 O5' U B 239 9.861 81.745 111.700 1.00 23.38 O
ATOM 6 C5' U B 239 9.782 80.308 111.619 1.00 24.50 C
ATOM 7 C4' U B 239 11.151 79.708 111.352 1.00 25.76 C
ATOM 8 O4' U B 239 11.632 80.156 110.061 1.00 25.59 O
ATOM 9 C3' U B 239 12.268 80.065 112.324 1.00 27.18 C
ATOM 10 O3' U B 239 12.283 79.199 113.456 1.00 31.17 O
ATOM 11 C2' U B 239 13.531 79.888 111.485 1.00 25.90 C
ATOM 12 O2' U B 239 14.016 78.558 111.454 1.00 26.17 O
ATOM 13 C1' U B 239 13.043 80.283 110.093 1.00 24.32 C
ATOM 14 N1 U B 239 13.400 81.662 109.738 1.00 48.66 N
ATOM 15 C2 U B 239 14.515 81.854 108.948 1.00 48.19 C
ATOM 16 O2 U B 239 15.208 80.938 108.533 1.00 46.55 O
ATOM 17 N3 U B 239 14.792 83.159 108.660 1.00 49.31 N
ATOM 18 C4 U B 239 14.088 84.261 109.069 1.00 49.13 C
ATOM 19 O4 U B 239 14.469 85.375 108.731 1.00 51.13 O
ATOM 20 C5 U B 239 12.951 83.981 109.878 1.00 48.08 C
ATOM 21 C6 U B 239 12.654 82.724 110.178 1.00 47.98 C
ATOM 22 P A B 240 12.917 79.716 114.836 1.00 46.70 P
ATOM 23 OP1 A B 240 12.091 79.118 115.925 1.00 71.98 O
ATOM 24 OP2 A B 240 13.068 81.198 114.751 1.00 72.08 O
ATOM 25 O5' A B 240 14.381 79.087 114.877 1.00 67.86 O
TER
ATOM 2 P C A 238 6.453 87.048 109.330 1.00 64.88 P
ATOM 3 OP1 C A 238 5.570 86.830 110.511 1.00 46.01 O
ATOM 4 OP2 C A 238 7.608 87.977 109.438 1.00 45.44 O
ATOM 5 O5' C A 238 7.010 85.628 108.849 1.00 36.86 O
ATOM 6 C5' C A 238 6.118 84.493 108.723 1.00 36.79 C
ATOM 7 C4' C A 238 6.889 83.204 108.505 1.00 37.83 C
ATOM 8 O4' C A 238 7.491 83.169 107.181 1.00 37.52 O
ATOM 9 C3' C A 238 8.044 82.899 109.440 1.00 39.07 C
ATOM 10 O3' C A 238 7.641 82.369 110.688 1.00 40.40 O
ATOM 11 C2' C A 238 8.835 81.874 108.646 1.00 38.47 C
ATOM 12 O2' C A 238 8.253 80.590 108.752 1.00 42.11 O
ATOM 13 C1' C A 238 8.681 82.403 107.218 1.00 35.77 C
ATOM 14 N1 C A 238 9.806 83.277 106.850 1.00 37.69 N
ATOM 15 C2 C A 238 11.106 82.732 106.789 1.00 36.98 C
ATOM 16 O2 C A 238 11.269 81.523 107.018 1.00 37.52 O
ATOM 17 N3 C A 238 12.147 83.537 106.483 1.00 36.25 N
ATOM 18 C4 C A 238 11.934 84.828 106.238 1.00 35.72 C
ATOM 19 N4 C A 238 12.983 85.580 105.945 1.00 36.16 N
ATOM 20 C5 C A 238 10.631 85.404 106.282 1.00 35.45 C
ATOM 21 C6 C A 238 9.607 84.602 106.587 1.00 35.15 C
ATOM 22 P U A 239 8.561 82.630 111.968 1.00 36.06 P
ATOM 23 OP1 U A 239 7.826 82.124 113.149 1.00 33.24 O
ATOM 24 OP2 U A 239 8.976 84.051 111.923 1.00 33.41 O
ATOM 25 O5' U A 239 9.861 81.745 111.700 1.00 23.38 O
TER
ATOM 1 O3' C B 238 7.641 82.369 110.688 1.00 40.40 O
ATOM 2 P U B 239 8.561 82.630 111.968 1.00 36.06 P
ATOM 3 OP1 U B 239 7.826 82.124 113.149 1.00 33.24 O
ATOM 4 OP2 U B 239 8.976 84.051 111.923 1.00 33.41 O
ATOM 5 O5' U B 239 9.861 81.745 111.700 1.00 23.38 O
ATOM 6 C5' U B 239 9.782 80.308 111.619 1.00 24.50 C
ATOM 7 C4' U B 239 11.151 79.708 111.352 1.00 25.76 C
ATOM 8 O4' U B 239 11.632 80.156 110.061 1.00 25.59 O
ATOM 9 C3' U B 239 12.268 80.065 112.324 1.00 27.18 C
ATOM 10 O3' U B 239 12.283 79.199 113.456 1.00 31.17 O
ATOM 11 C2' U B 239 13.531 79.888 111.485 1.00 25.90 C
ATOM 12 O2' U B 239 14.016 78.558 111.454 1.00 26.17 O
ATOM 13 C1' U B 239 13.043 80.283 110.093 1.00 24.32 C
ATOM 14 N1 U B 239 13.400 81.662 109.738 1.00 48.66 N
ATOM 15 C2 U B 239 14.515 81.854 108.948 1.00 48.19 C
ATOM 16 O2 U B 239 15.208 80.938 108.533 1.00 46.55 O
ATOM 17 N3 U B 239 14.792 83.159 108.660 1.00 49.31 N
ATOM 18 C4 U B 239 14.088 84.261 109.069 1.00 49.13 C
ATOM 19 O4 U B 239 14.469 85.375 108.731 1.00 51.13 O
ATOM 20 C5 U B 239 12.951 83.981 109.878 1.00 48.08 C
ATOM 21 C6 U B 239 12.654 82.724 110.178 1.00 47.98 C
ATOM 22 P A B 240 12.917 79.716 114.836 1.00 46.70 P
ATOM 23 OP1 A B 240 12.091 79.118 115.925 1.00 71.98 O
ATOM 24 OP2 A B 240 13.068 81.198 114.751 1.00 72.08 O
ATOM 25 O5' A B 240 14.381 79.087 114.877 1.00 67.86 O
TER
Atoms:
C2: (11.106,82.732,106.789)
OP1: (5.570,86.830,110.511)
OP2: (7.608,87.977,109.438)
C4: (11.934,84.828,106.238)
O5': (7.010,85.628,108.849)
C3': (8.044,82.899,109.440)
C1': (8.681,82.403,107.218)
O4': (7.491,83.169,107.181)
C5': (6.118,84.493,108.723)
P: (6.453,87.048,109.330)
O2: (11.269,81.523,107.018)
C4': (6.889,83.204,108.505)
C2': (8.835,81.874,108.646)
O2': (8.253,80.590,108.752)
N1: (9.806,83.277,106.850)
N3: (12.147,83.537,106.483)
N4: (12.983,85.580,105.945)
C6: (9.607,84.602,106.587)
C5: (10.631,85.404,106.282)
O3': (7.641,82.369,110.688)
OP1: (5.570,86.830,110.511)
OP2: (7.608,87.977,109.438)
C4: (11.934,84.828,106.238)
O5': (7.010,85.628,108.849)
C3': (8.044,82.899,109.440)
C1': (8.681,82.403,107.218)
O4': (7.491,83.169,107.181)
C5': (6.118,84.493,108.723)
P: (6.453,87.048,109.330)
O2: (11.269,81.523,107.018)
C4': (6.889,83.204,108.505)
C2': (8.835,81.874,108.646)
O2': (8.253,80.590,108.752)
N1: (9.806,83.277,106.850)
N3: (12.147,83.537,106.483)
N4: (12.983,85.580,105.945)
C6: (9.607,84.602,106.587)
C5: (10.631,85.404,106.282)
O3': (7.641,82.369,110.688)
C4: (14.088,84.261,109.069)
N3: (14.792,83.159,108.660)
OP1: (7.826,82.124,113.149)
OP2: (8.976,84.051,111.923)
C2: (14.515,81.854,108.948)
C1': (13.043,80.283,110.093)
C3': (12.268,80.065,112.324)
O5': (9.861,81.745,111.700)
O4': (11.632,80.156,110.061)
C5': (9.782,80.308,111.619)
P: (8.561,82.630,111.968)
C4': (11.151,79.708,111.352)
C2': (13.531,79.888,111.485)
O2': (14.016,78.558,111.454)
N1: (13.400,81.662,109.738)
O4: (14.469,85.375,108.731)
O2: (15.208,80.938,108.533)
C6: (12.654,82.724,110.178)
C5: (12.951,83.981,109.878)
O3': (12.283,79.199,113.456)
N3: (14.792,83.159,108.660)
OP1: (7.826,82.124,113.149)
OP2: (8.976,84.051,111.923)
C2: (14.515,81.854,108.948)
C1': (13.043,80.283,110.093)
C3': (12.268,80.065,112.324)
O5': (9.861,81.745,111.700)
O4': (11.632,80.156,110.061)
C5': (9.782,80.308,111.619)
P: (8.561,82.630,111.968)
C4': (11.151,79.708,111.352)
C2': (13.531,79.888,111.485)
O2': (14.016,78.558,111.454)
N1: (13.400,81.662,109.738)
O4: (14.469,85.375,108.731)
O2: (15.208,80.938,108.533)
C6: (12.654,82.724,110.178)
C5: (12.951,83.981,109.878)
O3': (12.283,79.199,113.456)
Image (generated by PyMOL):