Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01222:01223
Extra
PDB:
ATOM 1 O3' C A1221 13.669 88.163 98.854 1.00 31.88 O
ATOM 2 P C A1222 12.831 88.274 97.486 1.00 31.65 P
ATOM 3 OP1 C A1222 12.852 86.935 96.848 1.00 27.84 O
ATOM 4 OP2 C A1222 13.323 89.455 96.722 1.00 35.12 O
ATOM 5 O5' C A1222 11.361 88.657 97.967 1.00 33.64 O
ATOM 6 C5' C A1222 10.652 87.863 98.935 1.00 32.90 C
ATOM 7 C4' C A1222 9.459 88.632 99.463 1.00 34.73 C
ATOM 8 O4' C A1222 9.894 89.743 100.292 1.00 36.25 O
ATOM 9 C3' C A1222 8.589 89.297 98.412 1.00 35.81 C
ATOM 10 O3' C A1222 7.712 88.373 97.796 1.00 36.85 O
ATOM 11 C2' C A1222 7.863 90.365 99.218 1.00 36.23 C
ATOM 12 O2' C A1222 6.783 89.871 99.987 1.00 38.20 O
ATOM 13 C1' C A1222 8.972 90.817 100.167 1.00 34.99 C
ATOM 14 N1 C A1222 9.676 92.016 99.681 1.00 35.04 N
ATOM 15 C2 C A1222 9.094 93.262 99.923 1.00 35.78 C
ATOM 16 O2 C A1222 8.028 93.309 100.544 1.00 36.59 O
ATOM 17 N3 C A1222 9.707 94.385 99.474 1.00 36.75 N
ATOM 18 C4 C A1222 10.858 94.292 98.805 1.00 35.00 C
ATOM 19 N4 C A1222 11.418 95.426 98.369 1.00 32.08 N
ATOM 20 C5 C A1222 11.483 93.032 98.551 1.00 34.45 C
ATOM 21 C6 C A1222 10.864 91.929 99.004 1.00 34.85 C
ATOM 22 P U A1223 7.373 88.533 96.242 1.00 36.76 P
ATOM 23 OP1 U A1223 6.552 87.365 95.829 1.00 36.40 O
ATOM 24 OP2 U A1223 8.643 88.810 95.536 1.00 38.32 O
ATOM 25 O5' U A1223 6.489 89.856 96.203 1.00 34.69 O
TER
ATOM 1 O3' C B1222 7.712 88.373 97.796 1.00 36.85 O
ATOM 2 P U B1223 7.373 88.533 96.242 1.00 36.76 P
ATOM 3 OP1 U B1223 6.552 87.365 95.829 1.00 36.40 O
ATOM 4 OP2 U B1223 8.643 88.810 95.536 1.00 38.32 O
ATOM 5 O5' U B1223 6.489 89.856 96.203 1.00 34.69 O
ATOM 6 C5' U B1223 5.169 89.862 96.757 1.00 33.60 C
ATOM 7 C4' U B1223 4.590 91.254 96.741 1.00 32.83 C
ATOM 8 O4' U B1223 5.364 92.117 97.610 1.00 35.73 O
ATOM 9 C3' U B1223 4.606 91.991 95.419 1.00 32.73 C
ATOM 10 O3' U B1223 3.569 91.567 94.557 1.00 35.95 O
ATOM 11 C2' U B1223 4.439 93.433 95.872 1.00 33.58 C
ATOM 12 O2' U B1223 3.129 93.773 96.246 1.00 32.84 O
ATOM 13 C1' U B1223 5.318 93.449 97.121 1.00 33.23 C
ATOM 14 N1 U B1223 6.681 93.881 96.778 1.00 33.59 N
ATOM 15 C2 U B1223 6.915 95.239 96.722 1.00 33.22 C
ATOM 16 O2 U B1223 6.066 96.067 97.005 1.00 33.77 O
ATOM 17 N3 U B1223 8.181 95.592 96.322 1.00 33.82 N
ATOM 18 C4 U B1223 9.211 94.741 95.991 1.00 33.15 C
ATOM 19 O4 U B1223 10.263 95.208 95.564 1.00 35.26 O
ATOM 20 C5 U B1223 8.900 93.350 96.112 1.00 31.38 C
ATOM 21 C6 U B1223 7.681 92.976 96.493 1.00 31.21 C
ATOM 22 P G B1224 3.717 91.776 92.971 1.00 38.15 P
ATOM 23 OP1 G B1224 2.822 90.781 92.319 1.00 39.68 O
ATOM 24 OP2 G B1224 5.156 91.800 92.615 1.00 40.23 O
ATOM 25 O5' G B1224 3.117 93.230 92.731 1.00 36.49 O
TER
ATOM 2 P C A1222 12.831 88.274 97.486 1.00 31.65 P
ATOM 3 OP1 C A1222 12.852 86.935 96.848 1.00 27.84 O
ATOM 4 OP2 C A1222 13.323 89.455 96.722 1.00 35.12 O
ATOM 5 O5' C A1222 11.361 88.657 97.967 1.00 33.64 O
ATOM 6 C5' C A1222 10.652 87.863 98.935 1.00 32.90 C
ATOM 7 C4' C A1222 9.459 88.632 99.463 1.00 34.73 C
ATOM 8 O4' C A1222 9.894 89.743 100.292 1.00 36.25 O
ATOM 9 C3' C A1222 8.589 89.297 98.412 1.00 35.81 C
ATOM 10 O3' C A1222 7.712 88.373 97.796 1.00 36.85 O
ATOM 11 C2' C A1222 7.863 90.365 99.218 1.00 36.23 C
ATOM 12 O2' C A1222 6.783 89.871 99.987 1.00 38.20 O
ATOM 13 C1' C A1222 8.972 90.817 100.167 1.00 34.99 C
ATOM 14 N1 C A1222 9.676 92.016 99.681 1.00 35.04 N
ATOM 15 C2 C A1222 9.094 93.262 99.923 1.00 35.78 C
ATOM 16 O2 C A1222 8.028 93.309 100.544 1.00 36.59 O
ATOM 17 N3 C A1222 9.707 94.385 99.474 1.00 36.75 N
ATOM 18 C4 C A1222 10.858 94.292 98.805 1.00 35.00 C
ATOM 19 N4 C A1222 11.418 95.426 98.369 1.00 32.08 N
ATOM 20 C5 C A1222 11.483 93.032 98.551 1.00 34.45 C
ATOM 21 C6 C A1222 10.864 91.929 99.004 1.00 34.85 C
ATOM 22 P U A1223 7.373 88.533 96.242 1.00 36.76 P
ATOM 23 OP1 U A1223 6.552 87.365 95.829 1.00 36.40 O
ATOM 24 OP2 U A1223 8.643 88.810 95.536 1.00 38.32 O
ATOM 25 O5' U A1223 6.489 89.856 96.203 1.00 34.69 O
TER
ATOM 1 O3' C B1222 7.712 88.373 97.796 1.00 36.85 O
ATOM 2 P U B1223 7.373 88.533 96.242 1.00 36.76 P
ATOM 3 OP1 U B1223 6.552 87.365 95.829 1.00 36.40 O
ATOM 4 OP2 U B1223 8.643 88.810 95.536 1.00 38.32 O
ATOM 5 O5' U B1223 6.489 89.856 96.203 1.00 34.69 O
ATOM 6 C5' U B1223 5.169 89.862 96.757 1.00 33.60 C
ATOM 7 C4' U B1223 4.590 91.254 96.741 1.00 32.83 C
ATOM 8 O4' U B1223 5.364 92.117 97.610 1.00 35.73 O
ATOM 9 C3' U B1223 4.606 91.991 95.419 1.00 32.73 C
ATOM 10 O3' U B1223 3.569 91.567 94.557 1.00 35.95 O
ATOM 11 C2' U B1223 4.439 93.433 95.872 1.00 33.58 C
ATOM 12 O2' U B1223 3.129 93.773 96.246 1.00 32.84 O
ATOM 13 C1' U B1223 5.318 93.449 97.121 1.00 33.23 C
ATOM 14 N1 U B1223 6.681 93.881 96.778 1.00 33.59 N
ATOM 15 C2 U B1223 6.915 95.239 96.722 1.00 33.22 C
ATOM 16 O2 U B1223 6.066 96.067 97.005 1.00 33.77 O
ATOM 17 N3 U B1223 8.181 95.592 96.322 1.00 33.82 N
ATOM 18 C4 U B1223 9.211 94.741 95.991 1.00 33.15 C
ATOM 19 O4 U B1223 10.263 95.208 95.564 1.00 35.26 O
ATOM 20 C5 U B1223 8.900 93.350 96.112 1.00 31.38 C
ATOM 21 C6 U B1223 7.681 92.976 96.493 1.00 31.21 C
ATOM 22 P G B1224 3.717 91.776 92.971 1.00 38.15 P
ATOM 23 OP1 G B1224 2.822 90.781 92.319 1.00 39.68 O
ATOM 24 OP2 G B1224 5.156 91.800 92.615 1.00 40.23 O
ATOM 25 O5' G B1224 3.117 93.230 92.731 1.00 36.49 O
TER
Atoms:
C2: (9.094,93.262,99.923)
OP1: (12.852,86.935,96.848)
OP2: (13.323,89.455,96.722)
C4: (10.858,94.292,98.805)
O5': (11.361,88.657,97.967)
C3': (8.589,89.297,98.412)
C1': (8.972,90.817,100.167)
O4': (9.894,89.743,100.292)
C5': (10.652,87.863,98.935)
P: (12.831,88.274,97.486)
O2: (8.028,93.309,100.544)
C4': (9.459,88.632,99.463)
C2': (7.863,90.365,99.218)
O2': (6.783,89.871,99.987)
N1: (9.676,92.016,99.681)
N3: (9.707,94.385,99.474)
N4: (11.418,95.426,98.369)
C6: (10.864,91.929,99.004)
C5: (11.483,93.032,98.551)
O3': (7.712,88.373,97.796)
OP1: (12.852,86.935,96.848)
OP2: (13.323,89.455,96.722)
C4: (10.858,94.292,98.805)
O5': (11.361,88.657,97.967)
C3': (8.589,89.297,98.412)
C1': (8.972,90.817,100.167)
O4': (9.894,89.743,100.292)
C5': (10.652,87.863,98.935)
P: (12.831,88.274,97.486)
O2: (8.028,93.309,100.544)
C4': (9.459,88.632,99.463)
C2': (7.863,90.365,99.218)
O2': (6.783,89.871,99.987)
N1: (9.676,92.016,99.681)
N3: (9.707,94.385,99.474)
N4: (11.418,95.426,98.369)
C6: (10.864,91.929,99.004)
C5: (11.483,93.032,98.551)
O3': (7.712,88.373,97.796)
C4: (9.211,94.741,95.991)
N3: (8.181,95.592,96.322)
OP1: (6.552,87.365,95.829)
OP2: (8.643,88.810,95.536)
C2: (6.915,95.239,96.722)
C1': (5.318,93.449,97.121)
C3': (4.606,91.991,95.419)
O5': (6.489,89.856,96.203)
O4': (5.364,92.117,97.610)
C5': (5.169,89.862,96.757)
P: (7.373,88.533,96.242)
C4': (4.590,91.254,96.741)
C2': (4.439,93.433,95.872)
O2': (3.129,93.773,96.246)
N1: (6.681,93.881,96.778)
O4: (10.263,95.208,95.564)
O2: (6.066,96.067,97.005)
C6: (7.681,92.976,96.493)
C5: (8.900,93.350,96.112)
O3': (3.569,91.567,94.557)
N3: (8.181,95.592,96.322)
OP1: (6.552,87.365,95.829)
OP2: (8.643,88.810,95.536)
C2: (6.915,95.239,96.722)
C1': (5.318,93.449,97.121)
C3': (4.606,91.991,95.419)
O5': (6.489,89.856,96.203)
O4': (5.364,92.117,97.610)
C5': (5.169,89.862,96.757)
P: (7.373,88.533,96.242)
C4': (4.590,91.254,96.741)
C2': (4.439,93.433,95.872)
O2': (3.129,93.773,96.246)
N1: (6.681,93.881,96.778)
O4: (10.263,95.208,95.564)
O2: (6.066,96.067,97.005)
C6: (7.681,92.976,96.493)
C5: (8.900,93.350,96.112)
O3': (3.569,91.567,94.557)
Image (generated by PyMOL):