ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZEV:B6:B7

Extra

PDB:
ATOM 1 O3' G A 5 3.559 15.572 10.226 0.50 27.71 O
ATOM 2 P C A 6 2.878 15.585 11.665 0.50 27.54 P
ATOM 3 OP1 C A 6 3.871 16.024 12.662 0.50 29.02 O
ATOM 4 OP2 C A 6 2.137 14.320 11.831 0.50 26.92 O
ATOM 5 O5' C A 6 1.795 16.755 11.566 0.50 28.00 O
ATOM 6 C5' C A 6 2.175 17.991 10.905 0.50 27.94 C
ATOM 7 C4' C A 6 1.014 18.937 10.677 0.50 26.91 C
ATOM 8 O4' C A 6 0.340 18.659 9.415 0.50 24.47 O
ATOM 9 C3' C A 6 -0.097 18.823 11.700 0.50 26.32 C
ATOM 10 O3' C A 6 0.213 19.537 12.886 0.50 27.23 O
ATOM 11 C2' C A 6 -1.232 19.491 10.925 0.50 24.88 C
ATOM 12 O2' C A 6 -1.154 20.903 10.904 0.50 27.67 O
ATOM 13 C1' C A 6 -1.052 18.921 9.524 0.50 26.99 C
ATOM 14 N1 C A 6 -1.817 17.633 9.381 0.50 26.40 N
ATOM 15 C2 C A 6 -3.193 17.591 9.089 0.50 29.29 C
ATOM 16 O2 C A 6 -3.861 18.624 8.924 0.50 27.89 O
ATOM 17 N3 C A 6 -3.790 16.384 8.994 0.50 29.05 N
ATOM 18 C4 C A 6 -3.114 15.240 9.176 0.50 29.19 C
ATOM 19 N4 C A 6 -3.766 14.060 9.062 0.50 28.47 N
ATOM 20 C5 C A 6 -1.730 15.259 9.461 0.50 28.69 C
ATOM 21 C6 C A 6 -1.148 16.463 9.550 0.50 28.70 C
ATOM 22 P U A 7 -0.382 19.091 14.296 0.50 27.45 P
ATOM 23 OP1 U A 7 0.153 19.993 15.354 0.50 29.36 O
ATOM 24 OP2 U A 7 -0.274 17.623 14.365 0.50 28.99 O
ATOM 25 O5' U A 7 -1.954 19.386 14.125 0.50 25.62 O
TER

ATOM 1 O3' C B 6 0.213 19.537 12.886 0.50 27.23 O
ATOM 2 P U B 7 -0.382 19.091 14.296 0.50 27.45 P
ATOM 3 OP1 U B 7 0.153 19.993 15.354 0.50 29.36 O
ATOM 4 OP2 U B 7 -0.274 17.623 14.365 0.50 28.99 O
ATOM 5 O5' U B 7 -1.954 19.386 14.125 0.50 25.62 O
ATOM 6 C5' U B 7 -2.371 20.753 14.262 0.50 24.48 C
ATOM 7 C4' U B 7 -3.833 20.905 13.930 0.50 24.71 C
ATOM 8 O4' U B 7 -4.036 20.279 12.635 0.50 25.83 O
ATOM 9 C3' U B 7 -4.778 20.132 14.819 0.50 23.90 C
ATOM 10 O3' U B 7 -5.018 20.739 16.075 0.50 24.64 O
ATOM 11 C2' U B 7 -6.011 20.094 13.917 0.50 26.09 C
ATOM 12 O2' U B 7 -6.679 21.334 13.890 0.50 25.92 O
ATOM 13 C1' U B 7 -5.360 19.774 12.569 0.50 26.82 C
ATOM 14 N1 U B 7 -5.307 18.295 12.360 0.50 28.08 N
ATOM 15 C2 U B 7 -6.464 17.674 11.960 0.50 29.48 C
ATOM 16 O2 U B 7 -7.511 18.256 11.741 0.50 28.28 O
ATOM 17 N3 U B 7 -6.348 16.314 11.822 0.50 28.56 N
ATOM 18 C4 U B 7 -5.233 15.535 12.037 0.50 29.44 C
ATOM 19 O4 U B 7 -5.292 14.335 11.854 0.50 29.97 O
ATOM 20 C5 U B 7 -4.059 16.250 12.467 0.50 28.02 C
ATOM 21 C6 U B 7 -4.153 17.573 12.602 0.50 29.28 C
ATOM 22 P G B 8 -5.298 19.934 17.422 0.50 21.19 P
ATOM 23 OP1 G B 8 -5.122 20.948 18.496 0.50 22.24 O
ATOM 24 OP2 G B 8 -4.477 18.681 17.397 0.50 24.24 O
ATOM 25 O5' G B 8 -6.820 19.488 17.293 0.50 24.52 O
TER

Atoms:
C2: (-3.193,17.591,9.089)
OP1: (3.871,16.024,12.662)
OP2: (2.137,14.320,11.831)
C4: (-3.114,15.240,9.176)
O5': (1.795,16.755,11.566)
C3': (-0.097,18.823,11.700)
C1': (-1.052,18.921,9.524)
O4': (0.340,18.659,9.415)
C5': (2.175,17.991,10.905)
P: (2.878,15.585,11.665)
O2: (-3.861,18.624,8.924)
C4': (1.014,18.937,10.677)
C2': (-1.232,19.491,10.925)
O2': (-1.154,20.903,10.904)
N1: (-1.817,17.633,9.381)
N3: (-3.790,16.384,8.994)
N4: (-3.766,14.060,9.062)
C6: (-1.148,16.463,9.550)
C5: (-1.730,15.259,9.461)
O3': (0.213,19.537,12.886)
C4: (-5.233,15.535,12.037)
N3: (-6.348,16.314,11.822)
OP1: (0.153,19.993,15.354)
OP2: (-0.274,17.623,14.365)
C2: (-6.464,17.674,11.960)
C1': (-5.360,19.774,12.569)
C3': (-4.778,20.132,14.819)
O5': (-1.954,19.386,14.125)
O4': (-4.036,20.279,12.635)
C5': (-2.371,20.753,14.262)
P: (-0.382,19.091,14.296)
C4': (-3.833,20.905,13.930)
C2': (-6.011,20.094,13.917)
O2': (-6.679,21.334,13.890)
N1: (-5.307,18.295,12.360)
O4: (-5.292,14.335,11.854)
O2: (-7.511,18.256,11.741)
C6: (-4.153,17.573,12.602)
C5: (-4.059,16.250,12.467)
O3': (-5.018,20.739,16.075)
Image (generated by PyMOL):
PyMOL image
show in jmol