Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIY:A153:A154
Extra
PDB:
ATOM 1 O3' U A 152 49.759 1.532 23.140 1.00 64.29 O
ATOM 2 P C A 153 48.484 2.425 23.504 1.00 62.65 P
ATOM 3 OP1 C A 153 47.664 1.714 24.518 1.00 62.74 O
ATOM 4 OP2 C A 153 47.869 2.846 22.226 1.00 62.57 O
ATOM 5 O5' C A 153 49.166 3.716 24.166 1.00 60.73 O
ATOM 6 C5' C A 153 49.663 3.669 25.510 1.00 57.52 C
ATOM 7 C4' C A 153 51.001 4.374 25.673 1.00 54.83 C
ATOM 8 O4' C A 153 52.082 3.539 25.182 1.00 54.03 O
ATOM 9 C3' C A 153 51.205 5.663 24.892 1.00 53.29 C
ATOM 10 O3' C A 153 50.514 6.747 25.482 1.00 51.99 O
ATOM 11 C2' C A 153 52.716 5.802 25.021 1.00 53.20 C
ATOM 12 O2' C A 153 53.136 6.222 26.306 1.00 53.43 O
ATOM 13 C1' C A 153 53.155 4.365 24.752 1.00 52.83 C
ATOM 14 N1 C A 153 53.481 4.122 23.296 1.00 52.08 N
ATOM 15 C2 C A 153 54.712 4.556 22.759 1.00 51.43 C
ATOM 16 O2 C A 153 55.542 5.130 23.478 1.00 50.96 O
ATOM 17 N3 C A 153 54.967 4.328 21.443 1.00 51.20 N
ATOM 18 C4 C A 153 54.064 3.706 20.675 1.00 51.41 C
ATOM 19 N4 C A 153 54.361 3.503 19.390 1.00 51.79 N
ATOM 20 C5 C A 153 52.810 3.262 21.192 1.00 51.58 C
ATOM 21 C6 C A 153 52.568 3.490 22.489 1.00 51.86 C
ATOM 22 P U A 154 50.116 8.033 24.612 1.00 51.24 P
ATOM 23 OP1 U A 154 49.304 8.913 25.483 1.00 51.28 O
ATOM 24 OP2 U A 154 49.579 7.599 23.301 1.00 51.10 O
ATOM 25 O5' U A 154 51.530 8.728 24.336 1.00 49.84 O
TER
ATOM 1 O3' C B 153 50.514 6.747 25.482 1.00 51.99 O
ATOM 2 P U B 154 50.116 8.033 24.612 1.00 51.24 P
ATOM 3 OP1 U B 154 49.304 8.913 25.483 1.00 51.28 O
ATOM 4 OP2 U B 154 49.579 7.599 23.301 1.00 51.10 O
ATOM 5 O5' U B 154 51.530 8.728 24.336 1.00 49.84 O
ATOM 6 C5' U B 154 52.132 9.566 25.318 1.00 47.25 C
ATOM 7 C4' U B 154 53.453 10.112 24.814 1.00 45.21 C
ATOM 8 O4' U B 154 54.280 9.014 24.349 1.00 44.20 O
ATOM 9 C3' U B 154 53.384 11.032 23.601 1.00 44.16 C
ATOM 10 O3' U B 154 52.977 12.359 23.937 1.00 43.40 O
ATOM 11 C2' U B 154 54.837 10.956 23.146 1.00 43.74 C
ATOM 12 O2' U B 154 55.723 11.674 23.984 1.00 43.57 O
ATOM 13 C1' U B 154 55.093 9.457 23.274 1.00 43.24 C
ATOM 14 N1 U B 154 54.789 8.684 22.013 1.00 42.51 N
ATOM 15 C2 U B 154 55.667 8.750 20.943 1.00 41.90 C
ATOM 16 O2 U B 154 56.690 9.403 20.951 1.00 41.92 O
ATOM 17 N3 U B 154 55.308 8.015 19.839 1.00 41.78 N
ATOM 18 C4 U B 154 54.175 7.232 19.696 1.00 42.14 C
ATOM 19 O4 U B 154 53.979 6.630 18.647 1.00 42.37 O
ATOM 20 C5 U B 154 53.303 7.208 20.845 1.00 42.34 C
ATOM 21 C6 U B 154 53.637 7.916 21.933 1.00 42.40 C
ATOM 22 P C B 155 52.069 13.221 22.926 1.00 42.98 P
ATOM 23 OP1 C B 155 51.732 14.486 23.611 1.00 42.96 O
ATOM 24 OP2 C B 155 50.981 12.369 22.392 1.00 42.69 O
ATOM 25 O5' C B 155 53.060 13.531 21.709 1.00 42.41 O
TER
ATOM 2 P C A 153 48.484 2.425 23.504 1.00 62.65 P
ATOM 3 OP1 C A 153 47.664 1.714 24.518 1.00 62.74 O
ATOM 4 OP2 C A 153 47.869 2.846 22.226 1.00 62.57 O
ATOM 5 O5' C A 153 49.166 3.716 24.166 1.00 60.73 O
ATOM 6 C5' C A 153 49.663 3.669 25.510 1.00 57.52 C
ATOM 7 C4' C A 153 51.001 4.374 25.673 1.00 54.83 C
ATOM 8 O4' C A 153 52.082 3.539 25.182 1.00 54.03 O
ATOM 9 C3' C A 153 51.205 5.663 24.892 1.00 53.29 C
ATOM 10 O3' C A 153 50.514 6.747 25.482 1.00 51.99 O
ATOM 11 C2' C A 153 52.716 5.802 25.021 1.00 53.20 C
ATOM 12 O2' C A 153 53.136 6.222 26.306 1.00 53.43 O
ATOM 13 C1' C A 153 53.155 4.365 24.752 1.00 52.83 C
ATOM 14 N1 C A 153 53.481 4.122 23.296 1.00 52.08 N
ATOM 15 C2 C A 153 54.712 4.556 22.759 1.00 51.43 C
ATOM 16 O2 C A 153 55.542 5.130 23.478 1.00 50.96 O
ATOM 17 N3 C A 153 54.967 4.328 21.443 1.00 51.20 N
ATOM 18 C4 C A 153 54.064 3.706 20.675 1.00 51.41 C
ATOM 19 N4 C A 153 54.361 3.503 19.390 1.00 51.79 N
ATOM 20 C5 C A 153 52.810 3.262 21.192 1.00 51.58 C
ATOM 21 C6 C A 153 52.568 3.490 22.489 1.00 51.86 C
ATOM 22 P U A 154 50.116 8.033 24.612 1.00 51.24 P
ATOM 23 OP1 U A 154 49.304 8.913 25.483 1.00 51.28 O
ATOM 24 OP2 U A 154 49.579 7.599 23.301 1.00 51.10 O
ATOM 25 O5' U A 154 51.530 8.728 24.336 1.00 49.84 O
TER
ATOM 1 O3' C B 153 50.514 6.747 25.482 1.00 51.99 O
ATOM 2 P U B 154 50.116 8.033 24.612 1.00 51.24 P
ATOM 3 OP1 U B 154 49.304 8.913 25.483 1.00 51.28 O
ATOM 4 OP2 U B 154 49.579 7.599 23.301 1.00 51.10 O
ATOM 5 O5' U B 154 51.530 8.728 24.336 1.00 49.84 O
ATOM 6 C5' U B 154 52.132 9.566 25.318 1.00 47.25 C
ATOM 7 C4' U B 154 53.453 10.112 24.814 1.00 45.21 C
ATOM 8 O4' U B 154 54.280 9.014 24.349 1.00 44.20 O
ATOM 9 C3' U B 154 53.384 11.032 23.601 1.00 44.16 C
ATOM 10 O3' U B 154 52.977 12.359 23.937 1.00 43.40 O
ATOM 11 C2' U B 154 54.837 10.956 23.146 1.00 43.74 C
ATOM 12 O2' U B 154 55.723 11.674 23.984 1.00 43.57 O
ATOM 13 C1' U B 154 55.093 9.457 23.274 1.00 43.24 C
ATOM 14 N1 U B 154 54.789 8.684 22.013 1.00 42.51 N
ATOM 15 C2 U B 154 55.667 8.750 20.943 1.00 41.90 C
ATOM 16 O2 U B 154 56.690 9.403 20.951 1.00 41.92 O
ATOM 17 N3 U B 154 55.308 8.015 19.839 1.00 41.78 N
ATOM 18 C4 U B 154 54.175 7.232 19.696 1.00 42.14 C
ATOM 19 O4 U B 154 53.979 6.630 18.647 1.00 42.37 O
ATOM 20 C5 U B 154 53.303 7.208 20.845 1.00 42.34 C
ATOM 21 C6 U B 154 53.637 7.916 21.933 1.00 42.40 C
ATOM 22 P C B 155 52.069 13.221 22.926 1.00 42.98 P
ATOM 23 OP1 C B 155 51.732 14.486 23.611 1.00 42.96 O
ATOM 24 OP2 C B 155 50.981 12.369 22.392 1.00 42.69 O
ATOM 25 O5' C B 155 53.060 13.531 21.709 1.00 42.41 O
TER
Atoms:
C2: (54.712,4.556,22.759)
OP1: (47.664,1.714,24.518)
OP2: (47.869,2.846,22.226)
C4: (54.064,3.706,20.675)
O5': (49.166,3.716,24.166)
C3': (51.205,5.663,24.892)
C1': (53.155,4.365,24.752)
O4': (52.082,3.539,25.182)
C5': (49.663,3.669,25.510)
P: (48.484,2.425,23.504)
O2: (55.542,5.130,23.478)
C4': (51.001,4.374,25.673)
C2': (52.716,5.802,25.021)
O2': (53.136,6.222,26.306)
N1: (53.481,4.122,23.296)
N3: (54.967,4.328,21.443)
N4: (54.361,3.503,19.390)
C6: (52.568,3.490,22.489)
C5: (52.810,3.262,21.192)
O3': (50.514,6.747,25.482)
OP1: (47.664,1.714,24.518)
OP2: (47.869,2.846,22.226)
C4: (54.064,3.706,20.675)
O5': (49.166,3.716,24.166)
C3': (51.205,5.663,24.892)
C1': (53.155,4.365,24.752)
O4': (52.082,3.539,25.182)
C5': (49.663,3.669,25.510)
P: (48.484,2.425,23.504)
O2: (55.542,5.130,23.478)
C4': (51.001,4.374,25.673)
C2': (52.716,5.802,25.021)
O2': (53.136,6.222,26.306)
N1: (53.481,4.122,23.296)
N3: (54.967,4.328,21.443)
N4: (54.361,3.503,19.390)
C6: (52.568,3.490,22.489)
C5: (52.810,3.262,21.192)
O3': (50.514,6.747,25.482)
C4: (54.175,7.232,19.696)
N3: (55.308,8.015,19.839)
OP1: (49.304,8.913,25.483)
OP2: (49.579,7.599,23.301)
C2: (55.667,8.750,20.943)
C1': (55.093,9.457,23.274)
C3': (53.384,11.032,23.601)
O5': (51.530,8.728,24.336)
O4': (54.280,9.014,24.349)
C5': (52.132,9.566,25.318)
P: (50.116,8.033,24.612)
C4': (53.453,10.112,24.814)
C2': (54.837,10.956,23.146)
O2': (55.723,11.674,23.984)
N1: (54.789,8.684,22.013)
O4: (53.979,6.630,18.647)
O2: (56.690,9.403,20.951)
C6: (53.637,7.916,21.933)
C5: (53.303,7.208,20.845)
O3': (52.977,12.359,23.937)
N3: (55.308,8.015,19.839)
OP1: (49.304,8.913,25.483)
OP2: (49.579,7.599,23.301)
C2: (55.667,8.750,20.943)
C1': (55.093,9.457,23.274)
C3': (53.384,11.032,23.601)
O5': (51.530,8.728,24.336)
O4': (54.280,9.014,24.349)
C5': (52.132,9.566,25.318)
P: (50.116,8.033,24.612)
C4': (53.453,10.112,24.814)
C2': (54.837,10.956,23.146)
O2': (55.723,11.674,23.984)
N1: (54.789,8.684,22.013)
O4: (53.979,6.630,18.647)
O2: (56.690,9.403,20.951)
C6: (53.637,7.916,21.933)
C5: (53.303,7.208,20.845)
O3': (52.977,12.359,23.937)
Image (generated by PyMOL):