Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:B4:B5
Extra
PDB:
ATOM 1 O3' U A 3 -30.945 -34.502 20.729 1.00 62.45 O
ATOM 2 P C A 4 -29.815 -35.334 21.491 1.00 60.65 P
ATOM 3 OP1 C A 4 -30.360 -35.809 22.784 1.00 60.76 O
ATOM 4 OP2 C A 4 -28.560 -34.550 21.463 1.00 60.28 O
ATOM 5 O5' C A 4 -29.646 -36.596 20.529 1.00 60.12 O
ATOM 6 C5' C A 4 -30.730 -37.505 20.373 1.00 59.39 C
ATOM 7 C4' C A 4 -30.484 -38.454 19.221 1.00 58.46 C
ATOM 8 O4' C A 4 -30.354 -37.703 17.990 1.00 58.88 O
ATOM 9 C3' C A 4 -29.175 -39.218 19.299 1.00 57.31 C
ATOM 10 O3' C A 4 -29.284 -40.324 20.168 1.00 56.29 O
ATOM 11 C2' C A 4 -28.989 -39.619 17.842 1.00 57.77 C
ATOM 12 O2' C A 4 -29.851 -40.671 17.445 1.00 58.14 O
ATOM 13 C1' C A 4 -29.378 -38.311 17.159 1.00 58.24 C
ATOM 14 N1 C A 4 -28.225 -37.362 16.936 1.00 57.55 N
ATOM 15 C2 C A 4 -27.331 -37.569 15.870 1.00 57.65 C
ATOM 16 O2 C A 4 -27.492 -38.538 15.113 1.00 58.06 O
ATOM 17 N3 C A 4 -26.302 -36.691 15.693 1.00 57.41 N
ATOM 18 C4 C A 4 -26.147 -35.649 16.519 1.00 57.04 C
ATOM 19 N4 C A 4 -25.123 -34.813 16.317 1.00 56.30 N
ATOM 20 C5 C A 4 -27.043 -35.425 17.605 1.00 57.44 C
ATOM 21 C6 C A 4 -28.050 -36.291 17.768 1.00 57.33 C
ATOM 22 P U A 5 -28.014 -40.712 21.054 1.00 55.01 P
ATOM 23 OP1 U A 5 -28.411 -41.821 21.949 1.00 55.05 O
ATOM 24 OP2 U A 5 -27.432 -39.468 21.610 1.00 54.33 O
ATOM 25 O5' U A 5 -26.988 -41.274 19.967 1.00 54.66 O
TER
ATOM 1 O3' C B 4 -29.284 -40.324 20.168 1.00 56.29 O
ATOM 2 P U B 5 -28.014 -40.712 21.054 1.00 55.01 P
ATOM 3 OP1 U B 5 -28.411 -41.821 21.949 1.00 55.05 O
ATOM 4 OP2 U B 5 -27.432 -39.468 21.610 1.00 54.33 O
ATOM 5 O5' U B 5 -26.988 -41.274 19.967 1.00 54.66 O
ATOM 6 C5' U B 5 -27.165 -42.559 19.384 1.00 54.22 C
ATOM 7 C4' U B 5 -26.068 -42.798 18.365 1.00 53.91 C
ATOM 8 O4' U B 5 -26.077 -41.748 17.361 1.00 54.46 O
ATOM 9 C3' U B 5 -24.653 -42.743 18.917 1.00 52.69 C
ATOM 10 O3' U B 5 -24.299 -43.956 19.529 1.00 51.60 O
ATOM 11 C2' U B 5 -23.846 -42.487 17.651 1.00 52.93 C
ATOM 12 O2' U B 5 -23.671 -43.642 16.859 1.00 52.97 O
ATOM 13 C1' U B 5 -24.749 -41.496 16.925 1.00 53.72 C
ATOM 14 N1 U B 5 -24.347 -40.076 17.191 1.00 53.52 N
ATOM 15 C2 U B 5 -23.244 -39.571 16.531 1.00 53.45 C
ATOM 16 O2 U B 5 -22.587 -40.217 15.740 1.00 53.65 O
ATOM 17 N3 U B 5 -22.930 -38.269 16.827 1.00 53.52 N
ATOM 18 C4 U B 5 -23.591 -37.433 17.704 1.00 53.76 C
ATOM 19 O4 U B 5 -23.188 -36.288 17.863 1.00 54.26 O
ATOM 20 C5 U B 5 -24.728 -38.026 18.362 1.00 53.94 C
ATOM 21 C6 U B 5 -25.056 -39.295 18.086 1.00 53.85 C
ATOM 22 P G B 6 -23.296 -43.913 20.770 1.00 51.47 P
ATOM 23 OP1 G B 6 -23.467 -45.186 21.509 1.00 51.51 O
ATOM 24 OP2 G B 6 -23.451 -42.617 21.471 1.00 51.06 O
ATOM 25 O5' G B 6 -21.855 -43.895 20.069 1.00 50.78 O
TER
ATOM 2 P C A 4 -29.815 -35.334 21.491 1.00 60.65 P
ATOM 3 OP1 C A 4 -30.360 -35.809 22.784 1.00 60.76 O
ATOM 4 OP2 C A 4 -28.560 -34.550 21.463 1.00 60.28 O
ATOM 5 O5' C A 4 -29.646 -36.596 20.529 1.00 60.12 O
ATOM 6 C5' C A 4 -30.730 -37.505 20.373 1.00 59.39 C
ATOM 7 C4' C A 4 -30.484 -38.454 19.221 1.00 58.46 C
ATOM 8 O4' C A 4 -30.354 -37.703 17.990 1.00 58.88 O
ATOM 9 C3' C A 4 -29.175 -39.218 19.299 1.00 57.31 C
ATOM 10 O3' C A 4 -29.284 -40.324 20.168 1.00 56.29 O
ATOM 11 C2' C A 4 -28.989 -39.619 17.842 1.00 57.77 C
ATOM 12 O2' C A 4 -29.851 -40.671 17.445 1.00 58.14 O
ATOM 13 C1' C A 4 -29.378 -38.311 17.159 1.00 58.24 C
ATOM 14 N1 C A 4 -28.225 -37.362 16.936 1.00 57.55 N
ATOM 15 C2 C A 4 -27.331 -37.569 15.870 1.00 57.65 C
ATOM 16 O2 C A 4 -27.492 -38.538 15.113 1.00 58.06 O
ATOM 17 N3 C A 4 -26.302 -36.691 15.693 1.00 57.41 N
ATOM 18 C4 C A 4 -26.147 -35.649 16.519 1.00 57.04 C
ATOM 19 N4 C A 4 -25.123 -34.813 16.317 1.00 56.30 N
ATOM 20 C5 C A 4 -27.043 -35.425 17.605 1.00 57.44 C
ATOM 21 C6 C A 4 -28.050 -36.291 17.768 1.00 57.33 C
ATOM 22 P U A 5 -28.014 -40.712 21.054 1.00 55.01 P
ATOM 23 OP1 U A 5 -28.411 -41.821 21.949 1.00 55.05 O
ATOM 24 OP2 U A 5 -27.432 -39.468 21.610 1.00 54.33 O
ATOM 25 O5' U A 5 -26.988 -41.274 19.967 1.00 54.66 O
TER
ATOM 1 O3' C B 4 -29.284 -40.324 20.168 1.00 56.29 O
ATOM 2 P U B 5 -28.014 -40.712 21.054 1.00 55.01 P
ATOM 3 OP1 U B 5 -28.411 -41.821 21.949 1.00 55.05 O
ATOM 4 OP2 U B 5 -27.432 -39.468 21.610 1.00 54.33 O
ATOM 5 O5' U B 5 -26.988 -41.274 19.967 1.00 54.66 O
ATOM 6 C5' U B 5 -27.165 -42.559 19.384 1.00 54.22 C
ATOM 7 C4' U B 5 -26.068 -42.798 18.365 1.00 53.91 C
ATOM 8 O4' U B 5 -26.077 -41.748 17.361 1.00 54.46 O
ATOM 9 C3' U B 5 -24.653 -42.743 18.917 1.00 52.69 C
ATOM 10 O3' U B 5 -24.299 -43.956 19.529 1.00 51.60 O
ATOM 11 C2' U B 5 -23.846 -42.487 17.651 1.00 52.93 C
ATOM 12 O2' U B 5 -23.671 -43.642 16.859 1.00 52.97 O
ATOM 13 C1' U B 5 -24.749 -41.496 16.925 1.00 53.72 C
ATOM 14 N1 U B 5 -24.347 -40.076 17.191 1.00 53.52 N
ATOM 15 C2 U B 5 -23.244 -39.571 16.531 1.00 53.45 C
ATOM 16 O2 U B 5 -22.587 -40.217 15.740 1.00 53.65 O
ATOM 17 N3 U B 5 -22.930 -38.269 16.827 1.00 53.52 N
ATOM 18 C4 U B 5 -23.591 -37.433 17.704 1.00 53.76 C
ATOM 19 O4 U B 5 -23.188 -36.288 17.863 1.00 54.26 O
ATOM 20 C5 U B 5 -24.728 -38.026 18.362 1.00 53.94 C
ATOM 21 C6 U B 5 -25.056 -39.295 18.086 1.00 53.85 C
ATOM 22 P G B 6 -23.296 -43.913 20.770 1.00 51.47 P
ATOM 23 OP1 G B 6 -23.467 -45.186 21.509 1.00 51.51 O
ATOM 24 OP2 G B 6 -23.451 -42.617 21.471 1.00 51.06 O
ATOM 25 O5' G B 6 -21.855 -43.895 20.069 1.00 50.78 O
TER
Atoms:
C2: (-27.331,-37.569,15.870)
OP1: (-30.360,-35.809,22.784)
OP2: (-28.560,-34.550,21.463)
C4: (-26.147,-35.649,16.519)
O5': (-29.646,-36.596,20.529)
C3': (-29.175,-39.218,19.299)
C1': (-29.378,-38.311,17.159)
O4': (-30.354,-37.703,17.990)
C5': (-30.730,-37.505,20.373)
P: (-29.815,-35.334,21.491)
O2: (-27.492,-38.538,15.113)
C4': (-30.484,-38.454,19.221)
C2': (-28.989,-39.619,17.842)
O2': (-29.851,-40.671,17.445)
N1: (-28.225,-37.362,16.936)
N3: (-26.302,-36.691,15.693)
N4: (-25.123,-34.813,16.317)
C6: (-28.050,-36.291,17.768)
C5: (-27.043,-35.425,17.605)
O3': (-29.284,-40.324,20.168)
OP1: (-30.360,-35.809,22.784)
OP2: (-28.560,-34.550,21.463)
C4: (-26.147,-35.649,16.519)
O5': (-29.646,-36.596,20.529)
C3': (-29.175,-39.218,19.299)
C1': (-29.378,-38.311,17.159)
O4': (-30.354,-37.703,17.990)
C5': (-30.730,-37.505,20.373)
P: (-29.815,-35.334,21.491)
O2: (-27.492,-38.538,15.113)
C4': (-30.484,-38.454,19.221)
C2': (-28.989,-39.619,17.842)
O2': (-29.851,-40.671,17.445)
N1: (-28.225,-37.362,16.936)
N3: (-26.302,-36.691,15.693)
N4: (-25.123,-34.813,16.317)
C6: (-28.050,-36.291,17.768)
C5: (-27.043,-35.425,17.605)
O3': (-29.284,-40.324,20.168)
C4: (-23.591,-37.433,17.704)
N3: (-22.930,-38.269,16.827)
OP1: (-28.411,-41.821,21.949)
OP2: (-27.432,-39.468,21.610)
C2: (-23.244,-39.571,16.531)
C1': (-24.749,-41.496,16.925)
C3': (-24.653,-42.743,18.917)
O5': (-26.988,-41.274,19.967)
O4': (-26.077,-41.748,17.361)
C5': (-27.165,-42.559,19.384)
P: (-28.014,-40.712,21.054)
C4': (-26.068,-42.798,18.365)
C2': (-23.846,-42.487,17.651)
O2': (-23.671,-43.642,16.859)
N1: (-24.347,-40.076,17.191)
O4: (-23.188,-36.288,17.863)
O2: (-22.587,-40.217,15.740)
C6: (-25.056,-39.295,18.086)
C5: (-24.728,-38.026,18.362)
O3': (-24.299,-43.956,19.529)
N3: (-22.930,-38.269,16.827)
OP1: (-28.411,-41.821,21.949)
OP2: (-27.432,-39.468,21.610)
C2: (-23.244,-39.571,16.531)
C1': (-24.749,-41.496,16.925)
C3': (-24.653,-42.743,18.917)
O5': (-26.988,-41.274,19.967)
O4': (-26.077,-41.748,17.361)
C5': (-27.165,-42.559,19.384)
P: (-28.014,-40.712,21.054)
C4': (-26.068,-42.798,18.365)
C2': (-23.846,-42.487,17.651)
O2': (-23.671,-43.642,16.859)
N1: (-24.347,-40.076,17.191)
O4: (-23.188,-36.288,17.863)
O2: (-22.587,-40.217,15.740)
C6: (-25.056,-39.295,18.086)
C5: (-24.728,-38.026,18.362)
O3': (-24.299,-43.956,19.529)
Image (generated by PyMOL):