Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKW:B2:B3
Extra
PDB:
ATOM 1 O3' G A 1 -0.839 14.672 42.580 1.00122.69 O
ATOM 2 P C A 2 0.535 13.851 42.717 1.00111.82 P
ATOM 3 OP1 C A 2 1.160 14.260 44.000 1.00111.12 O
ATOM 4 OP2 C A 2 1.294 14.054 41.457 1.00110.20 O
ATOM 5 O5' C A 2 0.036 12.343 42.810 1.00101.86 O
ATOM 6 C5' C A 2 -0.778 11.913 43.888 1.00102.41 C
ATOM 7 C4' C A 2 -1.467 10.613 43.570 1.00104.15 C
ATOM 8 O4' C A 2 -2.299 10.777 42.392 1.00103.63 O
ATOM 9 C3' C A 2 -0.561 9.447 43.204 1.00107.52 C
ATOM 10 O3' C A 2 0.033 8.814 44.328 1.00109.46 O
ATOM 11 C2' C A 2 -1.504 8.551 42.415 1.00108.07 C
ATOM 12 O2' C A 2 -2.416 7.889 43.280 1.00110.16 O
ATOM 13 C1' C A 2 -2.281 9.593 41.623 1.00104.20 C
ATOM 14 N1 C A 2 -1.641 9.884 40.325 1.00102.96 N
ATOM 15 C2 C A 2 -1.745 8.914 39.323 1.00104.78 C
ATOM 16 O2 C A 2 -2.358 7.861 39.574 1.00105.50 O
ATOM 17 N3 C A 2 -1.175 9.145 38.115 1.00103.33 N
ATOM 18 C4 C A 2 -0.527 10.291 37.896 1.00 99.21 C
ATOM 19 N4 C A 2 0.011 10.466 36.689 1.00 96.57 N
ATOM 20 C5 C A 2 -0.405 11.298 38.901 1.00 98.93 C
ATOM 21 C6 C A 2 -0.972 11.056 40.093 1.00100.34 C
ATOM 22 P U A 3 1.572 8.340 44.270 1.00119.15 P
ATOM 23 OP1 U A 3 1.980 8.004 45.658 1.00117.93 O
ATOM 24 OP2 U A 3 2.326 9.390 43.541 1.00118.48 O
ATOM 25 O5' U A 3 1.501 7.015 43.387 1.00103.67 O
TER
ATOM 1 O3' C B 2 0.033 8.814 44.328 1.00109.46 O
ATOM 2 P U B 3 1.572 8.340 44.270 1.00119.15 P
ATOM 3 OP1 U B 3 1.980 8.004 45.658 1.00117.93 O
ATOM 4 OP2 U B 3 2.326 9.390 43.541 1.00118.48 O
ATOM 5 O5' U B 3 1.501 7.015 43.387 1.00103.67 O
ATOM 6 C5' U B 3 0.602 5.966 43.714 1.00105.10 C
ATOM 7 C4' U B 3 0.568 4.910 42.638 1.00107.05 C
ATOM 8 O4' U B 3 -0.016 5.457 41.430 1.00105.48 O
ATOM 9 C3' U B 3 1.918 4.372 42.190 1.00109.74 C
ATOM 10 O3' U B 3 2.424 3.371 43.059 1.00110.14 O
ATOM 11 C2' U B 3 1.636 3.869 40.775 1.00109.16 C
ATOM 12 O2' U B 3 1.064 2.567 40.810 1.00109.81 O
ATOM 13 C1' U B 3 0.568 4.854 40.295 1.00106.74 C
ATOM 14 N1 U B 3 1.119 5.919 39.420 1.00105.85 N
ATOM 15 C2 U B 3 1.596 5.604 38.149 1.00104.92 C
ATOM 16 O2 U B 3 1.639 4.467 37.689 1.00104.38 O
ATOM 17 N3 U B 3 2.050 6.690 37.428 1.00101.89 N
ATOM 18 C4 U B 3 2.064 8.019 37.822 1.00 97.76 C
ATOM 19 O4 U B 3 2.506 8.886 37.065 1.00 92.47 O
ATOM 20 C5 U B 3 1.541 8.254 39.132 1.00100.12 C
ATOM 21 C6 U B 3 1.094 7.225 39.859 1.00103.54 C
ATOM 22 P U B 4 3.858 2.701 42.778 1.00123.33 P
ATOM 23 OP1 U B 4 4.144 1.791 43.914 1.00124.47 O
ATOM 24 OP2 U B 4 4.808 3.806 42.490 1.00121.56 O
ATOM 25 O5' U B 4 3.597 1.852 41.457 1.00105.82 O
TER
ATOM 2 P C A 2 0.535 13.851 42.717 1.00111.82 P
ATOM 3 OP1 C A 2 1.160 14.260 44.000 1.00111.12 O
ATOM 4 OP2 C A 2 1.294 14.054 41.457 1.00110.20 O
ATOM 5 O5' C A 2 0.036 12.343 42.810 1.00101.86 O
ATOM 6 C5' C A 2 -0.778 11.913 43.888 1.00102.41 C
ATOM 7 C4' C A 2 -1.467 10.613 43.570 1.00104.15 C
ATOM 8 O4' C A 2 -2.299 10.777 42.392 1.00103.63 O
ATOM 9 C3' C A 2 -0.561 9.447 43.204 1.00107.52 C
ATOM 10 O3' C A 2 0.033 8.814 44.328 1.00109.46 O
ATOM 11 C2' C A 2 -1.504 8.551 42.415 1.00108.07 C
ATOM 12 O2' C A 2 -2.416 7.889 43.280 1.00110.16 O
ATOM 13 C1' C A 2 -2.281 9.593 41.623 1.00104.20 C
ATOM 14 N1 C A 2 -1.641 9.884 40.325 1.00102.96 N
ATOM 15 C2 C A 2 -1.745 8.914 39.323 1.00104.78 C
ATOM 16 O2 C A 2 -2.358 7.861 39.574 1.00105.50 O
ATOM 17 N3 C A 2 -1.175 9.145 38.115 1.00103.33 N
ATOM 18 C4 C A 2 -0.527 10.291 37.896 1.00 99.21 C
ATOM 19 N4 C A 2 0.011 10.466 36.689 1.00 96.57 N
ATOM 20 C5 C A 2 -0.405 11.298 38.901 1.00 98.93 C
ATOM 21 C6 C A 2 -0.972 11.056 40.093 1.00100.34 C
ATOM 22 P U A 3 1.572 8.340 44.270 1.00119.15 P
ATOM 23 OP1 U A 3 1.980 8.004 45.658 1.00117.93 O
ATOM 24 OP2 U A 3 2.326 9.390 43.541 1.00118.48 O
ATOM 25 O5' U A 3 1.501 7.015 43.387 1.00103.67 O
TER
ATOM 1 O3' C B 2 0.033 8.814 44.328 1.00109.46 O
ATOM 2 P U B 3 1.572 8.340 44.270 1.00119.15 P
ATOM 3 OP1 U B 3 1.980 8.004 45.658 1.00117.93 O
ATOM 4 OP2 U B 3 2.326 9.390 43.541 1.00118.48 O
ATOM 5 O5' U B 3 1.501 7.015 43.387 1.00103.67 O
ATOM 6 C5' U B 3 0.602 5.966 43.714 1.00105.10 C
ATOM 7 C4' U B 3 0.568 4.910 42.638 1.00107.05 C
ATOM 8 O4' U B 3 -0.016 5.457 41.430 1.00105.48 O
ATOM 9 C3' U B 3 1.918 4.372 42.190 1.00109.74 C
ATOM 10 O3' U B 3 2.424 3.371 43.059 1.00110.14 O
ATOM 11 C2' U B 3 1.636 3.869 40.775 1.00109.16 C
ATOM 12 O2' U B 3 1.064 2.567 40.810 1.00109.81 O
ATOM 13 C1' U B 3 0.568 4.854 40.295 1.00106.74 C
ATOM 14 N1 U B 3 1.119 5.919 39.420 1.00105.85 N
ATOM 15 C2 U B 3 1.596 5.604 38.149 1.00104.92 C
ATOM 16 O2 U B 3 1.639 4.467 37.689 1.00104.38 O
ATOM 17 N3 U B 3 2.050 6.690 37.428 1.00101.89 N
ATOM 18 C4 U B 3 2.064 8.019 37.822 1.00 97.76 C
ATOM 19 O4 U B 3 2.506 8.886 37.065 1.00 92.47 O
ATOM 20 C5 U B 3 1.541 8.254 39.132 1.00100.12 C
ATOM 21 C6 U B 3 1.094 7.225 39.859 1.00103.54 C
ATOM 22 P U B 4 3.858 2.701 42.778 1.00123.33 P
ATOM 23 OP1 U B 4 4.144 1.791 43.914 1.00124.47 O
ATOM 24 OP2 U B 4 4.808 3.806 42.490 1.00121.56 O
ATOM 25 O5' U B 4 3.597 1.852 41.457 1.00105.82 O
TER
Atoms:
C2: (-1.745,8.914,39.323)
OP1: (1.160,14.260,44.000)
OP2: (1.294,14.054,41.457)
C4: (-0.527,10.291,37.896)
O5': (0.036,12.343,42.810)
C3': (-0.561,9.447,43.204)
C1': (-2.281,9.593,41.623)
O4': (-2.299,10.777,42.392)
C5': (-0.778,11.913,43.888)
P: (0.535,13.851,42.717)
O2: (-2.358,7.861,39.574)
C4': (-1.467,10.613,43.570)
C2': (-1.504,8.551,42.415)
O2': (-2.416,7.889,43.280)
N1: (-1.641,9.884,40.325)
N3: (-1.175,9.145,38.115)
N4: (0.011,10.466,36.689)
C6: (-0.972,11.056,40.093)
C5: (-0.405,11.298,38.901)
O3': (0.033,8.814,44.328)
OP1: (1.160,14.260,44.000)
OP2: (1.294,14.054,41.457)
C4: (-0.527,10.291,37.896)
O5': (0.036,12.343,42.810)
C3': (-0.561,9.447,43.204)
C1': (-2.281,9.593,41.623)
O4': (-2.299,10.777,42.392)
C5': (-0.778,11.913,43.888)
P: (0.535,13.851,42.717)
O2: (-2.358,7.861,39.574)
C4': (-1.467,10.613,43.570)
C2': (-1.504,8.551,42.415)
O2': (-2.416,7.889,43.280)
N1: (-1.641,9.884,40.325)
N3: (-1.175,9.145,38.115)
N4: (0.011,10.466,36.689)
C6: (-0.972,11.056,40.093)
C5: (-0.405,11.298,38.901)
O3': (0.033,8.814,44.328)
C4: (2.064,8.019,37.822)
N3: (2.050,6.690,37.428)
OP1: (1.980,8.004,45.658)
OP2: (2.326,9.390,43.541)
C2: (1.596,5.604,38.149)
C1': (0.568,4.854,40.295)
C3': (1.918,4.372,42.190)
O5': (1.501,7.015,43.387)
O4': (-0.016,5.457,41.430)
C5': (0.602,5.966,43.714)
P: (1.572,8.340,44.270)
C4': (0.568,4.910,42.638)
C2': (1.636,3.869,40.775)
O2': (1.064,2.567,40.810)
N1: (1.119,5.919,39.420)
O4: (2.506,8.886,37.065)
O2: (1.639,4.467,37.689)
C6: (1.094,7.225,39.859)
C5: (1.541,8.254,39.132)
O3': (2.424,3.371,43.059)
N3: (2.050,6.690,37.428)
OP1: (1.980,8.004,45.658)
OP2: (2.326,9.390,43.541)
C2: (1.596,5.604,38.149)
C1': (0.568,4.854,40.295)
C3': (1.918,4.372,42.190)
O5': (1.501,7.015,43.387)
O4': (-0.016,5.457,41.430)
C5': (0.602,5.966,43.714)
P: (1.572,8.340,44.270)
C4': (0.568,4.910,42.638)
C2': (1.636,3.869,40.775)
O2': (1.064,2.567,40.810)
N1: (1.119,5.919,39.420)
O4: (2.506,8.886,37.065)
O2: (1.639,4.467,37.689)
C6: (1.094,7.225,39.859)
C5: (1.541,8.254,39.132)
O3': (2.424,3.371,43.059)
Image (generated by PyMOL):