ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2O3W:A7:A8

Extra

PDB:
ATOM 1 O3' G A 6 13.775 1.821 0.473 1.00 77.46 O
ATOM 2 P C A 7 13.469 2.755 1.735 1.00 73.73 P
ATOM 3 OP1 C A 7 13.727 1.964 2.962 1.00 73.61 O
ATOM 4 OP2 C A 7 12.135 3.365 1.516 1.00 74.03 O
ATOM 5 O5' C A 7 14.573 3.892 1.603 1.00 72.67 O
ATOM 6 C5' C A 7 15.937 3.549 1.422 1.00 69.38 C
ATOM 7 C4' C A 7 16.734 4.770 1.062 1.00 68.32 C
ATOM 8 O4' C A 7 16.395 5.202 -0.280 1.00 68.39 O
ATOM 9 C3' C A 7 16.482 6.006 1.906 1.00 68.39 C
ATOM 10 O3' C A 7 17.193 5.939 3.131 1.00 68.71 O
ATOM 11 C2' C A 7 17.040 7.092 1.001 1.00 69.39 C
ATOM 12 O2' C A 7 18.456 7.124 1.001 1.00 70.13 O
ATOM 13 C1' C A 7 16.545 6.610 -0.365 1.00 67.86 C
ATOM 14 N1 C A 7 15.243 7.199 -0.683 1.00 65.21 N
ATOM 15 C2 C A 7 15.205 8.524 -1.105 1.00 66.01 C
ATOM 16 O2 C A 7 16.278 9.148 -1.215 1.00 65.73 O
ATOM 17 N3 C A 7 14.008 9.098 -1.381 1.00 64.80 N
ATOM 18 C4 C A 7 12.886 8.392 -1.250 1.00 61.86 C
ATOM 19 N4 C A 7 11.735 9.000 -1.521 1.00 60.55 N
ATOM 20 C5 C A 7 12.899 7.035 -0.832 1.00 62.00 C
ATOM 21 C6 C A 7 14.090 6.481 -0.561 1.00 63.98 C
ATOM 22 P U A 8 16.613 6.685 4.435 1.00 68.25 P
ATOM 23 OP1 U A 8 17.593 6.415 5.508 1.00 69.28 O
ATOM 24 OP2 U A 8 15.182 6.324 4.651 1.00 69.75 O
ATOM 25 O5' U A 8 16.676 8.231 4.057 1.00 68.20 O
TER

ATOM 1 O3' C B 7 17.193 5.939 3.131 1.00 68.71 O
ATOM 2 P U B 8 16.613 6.685 4.435 1.00 68.25 P
ATOM 3 OP1 U B 8 17.593 6.415 5.508 1.00 69.28 O
ATOM 4 OP2 U B 8 15.182 6.324 4.651 1.00 69.75 O
ATOM 5 O5' U B 8 16.676 8.231 4.057 1.00 68.20 O
ATOM 6 C5' U B 8 17.914 8.880 3.828 1.00 66.07 C
ATOM 7 C4' U B 8 17.673 10.303 3.399 1.00 66.29 C
ATOM 8 O4' U B 8 17.029 10.311 2.098 1.00 64.39 O
ATOM 9 C3' U B 8 16.713 11.091 4.276 1.00 68.49 C
ATOM 10 O3' U B 8 17.361 11.626 5.423 1.00 72.04 O
ATOM 11 C2' U B 8 16.250 12.190 3.328 1.00 65.90 C
ATOM 12 O2' U B 8 17.202 13.223 3.209 1.00 68.41 O
ATOM 13 C1' U B 8 16.141 11.421 2.010 1.00 62.22 C
ATOM 14 N1 U B 8 14.780 10.914 1.796 1.00 57.64 N
ATOM 15 C2 U B 8 13.825 11.815 1.391 1.00 57.19 C
ATOM 16 O2 U B 8 14.073 12.978 1.187 1.00 60.03 O
ATOM 17 N3 U B 8 12.565 11.300 1.239 1.00 54.69 N
ATOM 18 C4 U B 8 12.182 9.996 1.449 1.00 53.43 C
ATOM 19 O4 U B 8 10.995 9.683 1.329 1.00 53.65 O
ATOM 20 C5 U B 8 13.240 9.124 1.851 1.00 52.12 C
ATOM 21 C6 U B 8 14.468 9.600 2.004 1.00 53.90 C
ATOM 22 P C B 9 16.539 11.786 6.794 1.00 73.67 P
ATOM 23 OP1 C B 9 17.519 11.966 7.897 1.00 73.26 O
ATOM 24 OP2 C B 9 15.556 10.676 6.865 1.00 75.77 O
ATOM 25 O5' C B 9 15.720 13.133 6.587 1.00 69.91 O
TER

Atoms:
C2: (15.205,8.524,-1.105)
OP1: (13.727,1.964,2.962)
OP2: (12.135,3.365,1.516)
C4: (12.886,8.392,-1.250)
O5': (14.573,3.892,1.603)
C3': (16.482,6.006,1.906)
C1': (16.545,6.610,-0.365)
O4': (16.395,5.202,-0.280)
C5': (15.937,3.549,1.422)
P: (13.469,2.755,1.735)
O2: (16.278,9.148,-1.215)
C4': (16.734,4.770,1.062)
C2': (17.040,7.092,1.001)
O2': (18.456,7.124,1.001)
N1: (15.243,7.199,-0.683)
N3: (14.008,9.098,-1.381)
N4: (11.735,9.000,-1.521)
C6: (14.090,6.481,-0.561)
C5: (12.899,7.035,-0.832)
O3': (17.193,5.939,3.131)
C4: (12.182,9.996,1.449)
N3: (12.565,11.300,1.239)
OP1: (17.593,6.415,5.508)
OP2: (15.182,6.324,4.651)
C2: (13.825,11.815,1.391)
C1': (16.141,11.421,2.010)
C3': (16.713,11.091,4.276)
O5': (16.676,8.231,4.057)
O4': (17.029,10.311,2.098)
C5': (17.914,8.880,3.828)
P: (16.613,6.685,4.435)
C4': (17.673,10.303,3.399)
C2': (16.250,12.190,3.328)
O2': (17.202,13.223,3.209)
N1: (14.780,10.914,1.796)
O4: (10.995,9.683,1.329)
O2: (14.073,12.978,1.187)
C6: (14.468,9.600,2.004)
C5: (13.240,9.124,1.851)
O3': (17.361,11.626,5.423)
Image (generated by PyMOL):
PyMOL image
show in jmol