Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1138:A1139
Extra
PDB:
ATOM 1 O3' G A1137 80.660 79.608 170.427 1.00128.68 O
ATOM 2 P C A1138 79.625 78.391 170.221 1.00129.93 P
ATOM 3 OP1 C A1138 79.780 77.911 168.822 1.00129.36 O
ATOM 4 OP2 C A1138 78.291 78.845 170.699 1.00130.19 O
ATOM 5 O5' C A1138 80.145 77.254 171.211 1.00129.38 O
ATOM 6 C5' C A1138 81.376 76.548 170.956 1.00128.75 C
ATOM 7 C4' C A1138 81.690 75.615 172.104 1.00128.76 C
ATOM 8 O4' C A1138 81.892 76.388 173.318 1.00128.86 O
ATOM 9 C3' C A1138 80.610 74.614 172.485 1.00128.64 C
ATOM 10 O3' C A1138 80.610 73.471 171.626 1.00128.90 O
ATOM 11 C2' C A1138 80.990 74.272 173.922 1.00128.15 C
ATOM 12 O2' C A1138 82.058 73.352 174.018 1.00127.47 O
ATOM 13 C1' C A1138 81.460 75.632 174.440 1.00128.12 C
ATOM 14 N1 C A1138 80.413 76.390 175.159 1.00128.15 N
ATOM 15 C2 C A1138 80.268 76.192 176.542 1.00128.06 C
ATOM 16 O2 C A1138 81.006 75.374 177.120 1.00127.86 O
ATOM 17 N3 C A1138 79.326 76.895 177.214 1.00127.87 N
ATOM 18 C4 C A1138 78.545 77.763 176.564 1.00127.72 C
ATOM 19 N4 C A1138 77.641 78.441 177.277 1.00127.46 N
ATOM 20 C5 C A1138 78.661 77.976 175.159 1.00127.79 C
ATOM 21 C6 C A1138 79.598 77.275 174.502 1.00128.04 C
ATOM 22 P U A1139 79.237 72.669 171.347 1.00128.70 P
ATOM 23 OP1 U A1139 79.557 71.622 170.342 1.00128.19 O
ATOM 24 OP2 U A1139 78.159 73.653 171.062 1.00128.77 O
ATOM 25 O5' U A1139 78.893 71.965 172.738 1.00127.28 O
TER
ATOM 1 O3' C B1138 80.610 73.471 171.626 1.00128.90 O
ATOM 2 P U B1139 79.237 72.669 171.347 1.00128.70 P
ATOM 3 OP1 U B1139 79.557 71.622 170.342 1.00128.19 O
ATOM 4 OP2 U B1139 78.159 73.653 171.062 1.00128.77 O
ATOM 5 O5' U B1139 78.893 71.965 172.738 1.00127.28 O
ATOM 6 C5' U B1139 79.722 70.916 173.261 1.00125.76 C
ATOM 7 C4' U B1139 79.224 70.463 174.617 1.00125.00 C
ATOM 8 O4' U B1139 79.351 71.539 175.587 1.00124.87 O
ATOM 9 C3' U B1139 77.765 70.045 174.737 1.00124.49 C
ATOM 10 O3' U B1139 77.519 68.719 174.253 1.00123.04 O
ATOM 11 C2' U B1139 77.545 70.131 176.244 1.00124.70 C
ATOM 12 O2' U B1139 78.049 68.999 176.925 1.00124.91 O
ATOM 13 C1' U B1139 78.385 71.360 176.616 1.00124.74 C
ATOM 14 N1 U B1139 77.602 72.601 176.770 1.00124.81 N
ATOM 15 C2 U B1139 77.093 72.914 178.035 1.00125.06 C
ATOM 16 O2 U B1139 77.259 72.213 179.025 1.00125.42 O
ATOM 17 N3 U B1139 76.379 74.085 178.094 1.00124.89 N
ATOM 18 C4 U B1139 76.125 74.959 177.055 1.00125.12 C
ATOM 19 O4 U B1139 75.489 75.993 177.273 1.00126.00 O
ATOM 20 C5 U B1139 76.674 74.567 175.794 1.00125.00 C
ATOM 21 C6 U B1139 77.375 73.434 175.697 1.00124.77 C
ATOM 22 P A B1140 76.041 68.303 173.759 1.00121.79 P
ATOM 23 OP1 A B1140 76.105 66.931 173.201 1.00121.44 O
ATOM 24 OP2 A B1140 75.516 69.408 172.921 1.00122.56 O
ATOM 25 O5' A B1140 75.157 68.256 175.086 1.00121.64 O
TER
ATOM 2 P C A1138 79.625 78.391 170.221 1.00129.93 P
ATOM 3 OP1 C A1138 79.780 77.911 168.822 1.00129.36 O
ATOM 4 OP2 C A1138 78.291 78.845 170.699 1.00130.19 O
ATOM 5 O5' C A1138 80.145 77.254 171.211 1.00129.38 O
ATOM 6 C5' C A1138 81.376 76.548 170.956 1.00128.75 C
ATOM 7 C4' C A1138 81.690 75.615 172.104 1.00128.76 C
ATOM 8 O4' C A1138 81.892 76.388 173.318 1.00128.86 O
ATOM 9 C3' C A1138 80.610 74.614 172.485 1.00128.64 C
ATOM 10 O3' C A1138 80.610 73.471 171.626 1.00128.90 O
ATOM 11 C2' C A1138 80.990 74.272 173.922 1.00128.15 C
ATOM 12 O2' C A1138 82.058 73.352 174.018 1.00127.47 O
ATOM 13 C1' C A1138 81.460 75.632 174.440 1.00128.12 C
ATOM 14 N1 C A1138 80.413 76.390 175.159 1.00128.15 N
ATOM 15 C2 C A1138 80.268 76.192 176.542 1.00128.06 C
ATOM 16 O2 C A1138 81.006 75.374 177.120 1.00127.86 O
ATOM 17 N3 C A1138 79.326 76.895 177.214 1.00127.87 N
ATOM 18 C4 C A1138 78.545 77.763 176.564 1.00127.72 C
ATOM 19 N4 C A1138 77.641 78.441 177.277 1.00127.46 N
ATOM 20 C5 C A1138 78.661 77.976 175.159 1.00127.79 C
ATOM 21 C6 C A1138 79.598 77.275 174.502 1.00128.04 C
ATOM 22 P U A1139 79.237 72.669 171.347 1.00128.70 P
ATOM 23 OP1 U A1139 79.557 71.622 170.342 1.00128.19 O
ATOM 24 OP2 U A1139 78.159 73.653 171.062 1.00128.77 O
ATOM 25 O5' U A1139 78.893 71.965 172.738 1.00127.28 O
TER
ATOM 1 O3' C B1138 80.610 73.471 171.626 1.00128.90 O
ATOM 2 P U B1139 79.237 72.669 171.347 1.00128.70 P
ATOM 3 OP1 U B1139 79.557 71.622 170.342 1.00128.19 O
ATOM 4 OP2 U B1139 78.159 73.653 171.062 1.00128.77 O
ATOM 5 O5' U B1139 78.893 71.965 172.738 1.00127.28 O
ATOM 6 C5' U B1139 79.722 70.916 173.261 1.00125.76 C
ATOM 7 C4' U B1139 79.224 70.463 174.617 1.00125.00 C
ATOM 8 O4' U B1139 79.351 71.539 175.587 1.00124.87 O
ATOM 9 C3' U B1139 77.765 70.045 174.737 1.00124.49 C
ATOM 10 O3' U B1139 77.519 68.719 174.253 1.00123.04 O
ATOM 11 C2' U B1139 77.545 70.131 176.244 1.00124.70 C
ATOM 12 O2' U B1139 78.049 68.999 176.925 1.00124.91 O
ATOM 13 C1' U B1139 78.385 71.360 176.616 1.00124.74 C
ATOM 14 N1 U B1139 77.602 72.601 176.770 1.00124.81 N
ATOM 15 C2 U B1139 77.093 72.914 178.035 1.00125.06 C
ATOM 16 O2 U B1139 77.259 72.213 179.025 1.00125.42 O
ATOM 17 N3 U B1139 76.379 74.085 178.094 1.00124.89 N
ATOM 18 C4 U B1139 76.125 74.959 177.055 1.00125.12 C
ATOM 19 O4 U B1139 75.489 75.993 177.273 1.00126.00 O
ATOM 20 C5 U B1139 76.674 74.567 175.794 1.00125.00 C
ATOM 21 C6 U B1139 77.375 73.434 175.697 1.00124.77 C
ATOM 22 P A B1140 76.041 68.303 173.759 1.00121.79 P
ATOM 23 OP1 A B1140 76.105 66.931 173.201 1.00121.44 O
ATOM 24 OP2 A B1140 75.516 69.408 172.921 1.00122.56 O
ATOM 25 O5' A B1140 75.157 68.256 175.086 1.00121.64 O
TER
Atoms:
C2: (80.268,76.192,176.542)
OP1: (79.780,77.911,168.822)
OP2: (78.291,78.845,170.699)
C4: (78.545,77.763,176.564)
O5': (80.145,77.254,171.211)
C3': (80.610,74.614,172.485)
C1': (81.460,75.632,174.440)
O4': (81.892,76.388,173.318)
C5': (81.376,76.548,170.956)
P: (79.625,78.391,170.221)
O2: (81.006,75.374,177.120)
C4': (81.690,75.615,172.104)
C2': (80.990,74.272,173.922)
O2': (82.058,73.352,174.018)
N1: (80.413,76.390,175.159)
N3: (79.326,76.895,177.214)
N4: (77.641,78.441,177.277)
C6: (79.598,77.275,174.502)
C5: (78.661,77.976,175.159)
O3': (80.610,73.471,171.626)
OP1: (79.780,77.911,168.822)
OP2: (78.291,78.845,170.699)
C4: (78.545,77.763,176.564)
O5': (80.145,77.254,171.211)
C3': (80.610,74.614,172.485)
C1': (81.460,75.632,174.440)
O4': (81.892,76.388,173.318)
C5': (81.376,76.548,170.956)
P: (79.625,78.391,170.221)
O2: (81.006,75.374,177.120)
C4': (81.690,75.615,172.104)
C2': (80.990,74.272,173.922)
O2': (82.058,73.352,174.018)
N1: (80.413,76.390,175.159)
N3: (79.326,76.895,177.214)
N4: (77.641,78.441,177.277)
C6: (79.598,77.275,174.502)
C5: (78.661,77.976,175.159)
O3': (80.610,73.471,171.626)
C4: (76.125,74.959,177.055)
N3: (76.379,74.085,178.094)
OP1: (79.557,71.622,170.342)
OP2: (78.159,73.653,171.062)
C2: (77.093,72.914,178.035)
C1': (78.385,71.360,176.616)
C3': (77.765,70.045,174.737)
O5': (78.893,71.965,172.738)
O4': (79.351,71.539,175.587)
C5': (79.722,70.916,173.261)
P: (79.237,72.669,171.347)
C4': (79.224,70.463,174.617)
C2': (77.545,70.131,176.244)
O2': (78.049,68.999,176.925)
N1: (77.602,72.601,176.770)
O4: (75.489,75.993,177.273)
O2: (77.259,72.213,179.025)
C6: (77.375,73.434,175.697)
C5: (76.674,74.567,175.794)
O3': (77.519,68.719,174.253)
N3: (76.379,74.085,178.094)
OP1: (79.557,71.622,170.342)
OP2: (78.159,73.653,171.062)
C2: (77.093,72.914,178.035)
C1': (78.385,71.360,176.616)
C3': (77.765,70.045,174.737)
O5': (78.893,71.965,172.738)
O4': (79.351,71.539,175.587)
C5': (79.722,70.916,173.261)
P: (79.237,72.669,171.347)
C4': (79.224,70.463,174.617)
C2': (77.545,70.131,176.244)
O2': (78.049,68.999,176.925)
N1: (77.602,72.601,176.770)
O4: (75.489,75.993,177.273)
O2: (77.259,72.213,179.025)
C6: (77.375,73.434,175.697)
C5: (76.674,74.567,175.794)
O3': (77.519,68.719,174.253)
Image (generated by PyMOL):