Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01727:01728
Extra
PDB:
ATOM 1 O3' C A1726 118.017 143.741 113.780 1.00 56.05 O
ATOM 2 P C A1727 119.247 143.435 112.790 1.00 57.05 P
ATOM 3 OP1 C A1727 119.955 142.227 113.307 1.00 55.76 O
ATOM 4 OP2 C A1727 120.004 144.699 112.564 1.00 55.75 O
ATOM 5 O5' C A1727 118.571 143.057 111.398 1.00 56.33 O
ATOM 6 C5' C A1727 117.532 142.064 111.306 1.00 52.53 C
ATOM 7 C4' C A1727 116.777 142.225 110.003 1.00 51.17 C
ATOM 8 O4' C A1727 116.046 143.484 110.001 1.00 50.02 O
ATOM 9 C3' C A1727 117.638 142.302 108.753 1.00 48.43 C
ATOM 10 O3' C A1727 118.035 141.025 108.289 1.00 45.45 O
ATOM 11 C2' C A1727 116.719 143.006 107.769 1.00 49.45 C
ATOM 12 O2' C A1727 115.758 142.145 107.204 1.00 50.21 O
ATOM 13 C1' C A1727 116.021 144.013 108.683 1.00 50.17 C
ATOM 14 N1 C A1727 116.693 145.326 108.680 1.00 53.34 N
ATOM 15 C2 C A1727 116.474 146.187 107.599 1.00 54.32 C
ATOM 16 O2 C A1727 115.719 145.825 106.690 1.00 57.04 O
ATOM 17 N3 C A1727 117.090 147.390 107.575 1.00 55.26 N
ATOM 18 C4 C A1727 117.895 147.748 108.577 1.00 55.02 C
ATOM 19 N4 C A1727 118.483 148.943 108.509 1.00 54.00 N
ATOM 20 C5 C A1727 118.133 146.894 109.692 1.00 54.69 C
ATOM 21 C6 C A1727 117.518 145.705 109.704 1.00 53.97 C
ATOM 22 P U A1728 119.385 140.881 107.434 1.00 49.19 P
ATOM 23 OP1 U A1728 119.521 139.468 106.982 1.00 47.86 O
ATOM 24 OP2 U A1728 120.479 141.507 108.225 1.00 51.19 O
ATOM 25 O5' U A1728 119.134 141.793 106.154 1.00 47.25 O
TER
ATOM 1 O3' C B1727 118.035 141.025 108.289 1.00 45.45 O
ATOM 2 P U B1728 119.385 140.881 107.434 1.00 49.19 P
ATOM 3 OP1 U B1728 119.521 139.468 106.982 1.00 47.86 O
ATOM 4 OP2 U B1728 120.479 141.507 108.225 1.00 51.19 O
ATOM 5 O5' U B1728 119.134 141.793 106.154 1.00 47.25 O
ATOM 6 C5' U B1728 118.170 141.408 105.164 1.00 46.72 C
ATOM 7 C4' U B1728 118.176 142.383 104.019 1.00 45.47 C
ATOM 8 O4' U B1728 117.690 143.677 104.462 1.00 47.02 O
ATOM 9 C3' U B1728 119.537 142.683 103.424 1.00 43.83 C
ATOM 10 O3' U B1728 119.940 141.667 102.528 1.00 42.12 O
ATOM 11 C2' U B1728 119.297 144.020 102.741 1.00 45.68 C
ATOM 12 O2' U B1728 118.651 143.889 101.491 1.00 43.97 O
ATOM 13 C1' U B1728 118.368 144.704 103.750 1.00 47.93 C
ATOM 14 N1 U B1728 119.104 145.528 104.720 1.00 50.58 N
ATOM 15 C2 U B1728 119.448 146.821 104.352 1.00 51.50 C
ATOM 16 O2 U B1728 119.151 147.307 103.272 1.00 50.65 O
ATOM 17 N3 U B1728 120.152 147.524 105.300 1.00 52.75 N
ATOM 18 C4 U B1728 120.529 147.083 106.556 1.00 54.23 C
ATOM 19 O4 U B1728 121.121 147.850 107.315 1.00 56.10 O
ATOM 20 C5 U B1728 120.132 145.744 106.865 1.00 54.32 C
ATOM 21 C6 U B1728 119.452 145.030 105.961 1.00 52.87 C
ATOM 22 P U B1729 121.438 141.656 101.953 1.00 44.16 P
ATOM 23 OP1 U B1729 121.747 140.267 101.524 1.00 43.33 O
ATOM 24 OP2 U B1729 122.328 142.337 102.926 1.00 46.27 O
ATOM 25 O5' U B1729 121.359 142.560 100.647 1.00 45.25 O
TER
ATOM 2 P C A1727 119.247 143.435 112.790 1.00 57.05 P
ATOM 3 OP1 C A1727 119.955 142.227 113.307 1.00 55.76 O
ATOM 4 OP2 C A1727 120.004 144.699 112.564 1.00 55.75 O
ATOM 5 O5' C A1727 118.571 143.057 111.398 1.00 56.33 O
ATOM 6 C5' C A1727 117.532 142.064 111.306 1.00 52.53 C
ATOM 7 C4' C A1727 116.777 142.225 110.003 1.00 51.17 C
ATOM 8 O4' C A1727 116.046 143.484 110.001 1.00 50.02 O
ATOM 9 C3' C A1727 117.638 142.302 108.753 1.00 48.43 C
ATOM 10 O3' C A1727 118.035 141.025 108.289 1.00 45.45 O
ATOM 11 C2' C A1727 116.719 143.006 107.769 1.00 49.45 C
ATOM 12 O2' C A1727 115.758 142.145 107.204 1.00 50.21 O
ATOM 13 C1' C A1727 116.021 144.013 108.683 1.00 50.17 C
ATOM 14 N1 C A1727 116.693 145.326 108.680 1.00 53.34 N
ATOM 15 C2 C A1727 116.474 146.187 107.599 1.00 54.32 C
ATOM 16 O2 C A1727 115.719 145.825 106.690 1.00 57.04 O
ATOM 17 N3 C A1727 117.090 147.390 107.575 1.00 55.26 N
ATOM 18 C4 C A1727 117.895 147.748 108.577 1.00 55.02 C
ATOM 19 N4 C A1727 118.483 148.943 108.509 1.00 54.00 N
ATOM 20 C5 C A1727 118.133 146.894 109.692 1.00 54.69 C
ATOM 21 C6 C A1727 117.518 145.705 109.704 1.00 53.97 C
ATOM 22 P U A1728 119.385 140.881 107.434 1.00 49.19 P
ATOM 23 OP1 U A1728 119.521 139.468 106.982 1.00 47.86 O
ATOM 24 OP2 U A1728 120.479 141.507 108.225 1.00 51.19 O
ATOM 25 O5' U A1728 119.134 141.793 106.154 1.00 47.25 O
TER
ATOM 1 O3' C B1727 118.035 141.025 108.289 1.00 45.45 O
ATOM 2 P U B1728 119.385 140.881 107.434 1.00 49.19 P
ATOM 3 OP1 U B1728 119.521 139.468 106.982 1.00 47.86 O
ATOM 4 OP2 U B1728 120.479 141.507 108.225 1.00 51.19 O
ATOM 5 O5' U B1728 119.134 141.793 106.154 1.00 47.25 O
ATOM 6 C5' U B1728 118.170 141.408 105.164 1.00 46.72 C
ATOM 7 C4' U B1728 118.176 142.383 104.019 1.00 45.47 C
ATOM 8 O4' U B1728 117.690 143.677 104.462 1.00 47.02 O
ATOM 9 C3' U B1728 119.537 142.683 103.424 1.00 43.83 C
ATOM 10 O3' U B1728 119.940 141.667 102.528 1.00 42.12 O
ATOM 11 C2' U B1728 119.297 144.020 102.741 1.00 45.68 C
ATOM 12 O2' U B1728 118.651 143.889 101.491 1.00 43.97 O
ATOM 13 C1' U B1728 118.368 144.704 103.750 1.00 47.93 C
ATOM 14 N1 U B1728 119.104 145.528 104.720 1.00 50.58 N
ATOM 15 C2 U B1728 119.448 146.821 104.352 1.00 51.50 C
ATOM 16 O2 U B1728 119.151 147.307 103.272 1.00 50.65 O
ATOM 17 N3 U B1728 120.152 147.524 105.300 1.00 52.75 N
ATOM 18 C4 U B1728 120.529 147.083 106.556 1.00 54.23 C
ATOM 19 O4 U B1728 121.121 147.850 107.315 1.00 56.10 O
ATOM 20 C5 U B1728 120.132 145.744 106.865 1.00 54.32 C
ATOM 21 C6 U B1728 119.452 145.030 105.961 1.00 52.87 C
ATOM 22 P U B1729 121.438 141.656 101.953 1.00 44.16 P
ATOM 23 OP1 U B1729 121.747 140.267 101.524 1.00 43.33 O
ATOM 24 OP2 U B1729 122.328 142.337 102.926 1.00 46.27 O
ATOM 25 O5' U B1729 121.359 142.560 100.647 1.00 45.25 O
TER
Atoms:
C2: (116.474,146.187,107.599)
OP1: (119.955,142.227,113.307)
OP2: (120.004,144.699,112.564)
C4: (117.895,147.748,108.577)
O5': (118.571,143.057,111.398)
C3': (117.638,142.302,108.753)
C1': (116.021,144.013,108.683)
O4': (116.046,143.484,110.001)
C5': (117.532,142.064,111.306)
P: (119.247,143.435,112.790)
O2: (115.719,145.825,106.690)
C4': (116.777,142.225,110.003)
C2': (116.719,143.006,107.769)
O2': (115.758,142.145,107.204)
N1: (116.693,145.326,108.680)
N3: (117.090,147.390,107.575)
N4: (118.483,148.943,108.509)
C6: (117.518,145.705,109.704)
C5: (118.133,146.894,109.692)
O3': (118.035,141.025,108.289)
OP1: (119.955,142.227,113.307)
OP2: (120.004,144.699,112.564)
C4: (117.895,147.748,108.577)
O5': (118.571,143.057,111.398)
C3': (117.638,142.302,108.753)
C1': (116.021,144.013,108.683)
O4': (116.046,143.484,110.001)
C5': (117.532,142.064,111.306)
P: (119.247,143.435,112.790)
O2: (115.719,145.825,106.690)
C4': (116.777,142.225,110.003)
C2': (116.719,143.006,107.769)
O2': (115.758,142.145,107.204)
N1: (116.693,145.326,108.680)
N3: (117.090,147.390,107.575)
N4: (118.483,148.943,108.509)
C6: (117.518,145.705,109.704)
C5: (118.133,146.894,109.692)
O3': (118.035,141.025,108.289)
C4: (120.529,147.083,106.556)
N3: (120.152,147.524,105.300)
OP1: (119.521,139.468,106.982)
OP2: (120.479,141.507,108.225)
C2: (119.448,146.821,104.352)
C1': (118.368,144.704,103.750)
C3': (119.537,142.683,103.424)
O5': (119.134,141.793,106.154)
O4': (117.690,143.677,104.462)
C5': (118.170,141.408,105.164)
P: (119.385,140.881,107.434)
C4': (118.176,142.383,104.019)
C2': (119.297,144.020,102.741)
O2': (118.651,143.889,101.491)
N1: (119.104,145.528,104.720)
O4: (121.121,147.850,107.315)
O2: (119.151,147.307,103.272)
C6: (119.452,145.030,105.961)
C5: (120.132,145.744,106.865)
O3': (119.940,141.667,102.528)
N3: (120.152,147.524,105.300)
OP1: (119.521,139.468,106.982)
OP2: (120.479,141.507,108.225)
C2: (119.448,146.821,104.352)
C1': (118.368,144.704,103.750)
C3': (119.537,142.683,103.424)
O5': (119.134,141.793,106.154)
O4': (117.690,143.677,104.462)
C5': (118.170,141.408,105.164)
P: (119.385,140.881,107.434)
C4': (118.176,142.383,104.019)
C2': (119.297,144.020,102.741)
O2': (118.651,143.889,101.491)
N1: (119.104,145.528,104.720)
O4: (121.121,147.850,107.315)
O2: (119.151,147.307,103.272)
C6: (119.452,145.030,105.961)
C5: (120.132,145.744,106.865)
O3': (119.940,141.667,102.528)
Image (generated by PyMOL):