Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:43:44
Extra
PDB:
ATOM 1 O3' A A 2 65.931 37.076 59.994 1.00 55.85 O
ATOM 2 P C A 3 66.344 35.658 60.652 1.00 42.33 P
ATOM 3 OP1 C A 3 66.178 35.771 62.123 1.00 42.30 O
ATOM 4 OP2 C A 3 67.692 35.291 60.110 1.00 42.58 O
ATOM 5 O5' C A 3 65.256 34.685 60.061 1.00 41.81 O
ATOM 6 C5' C A 3 63.886 34.857 60.366 1.00 41.53 C
ATOM 7 C4' C A 3 63.029 33.988 59.509 1.00 41.13 C
ATOM 8 O4' C A 3 63.132 34.381 58.128 1.00 41.32 O
ATOM 9 C3' C A 3 63.395 32.542 59.491 1.00 40.83 C
ATOM 10 O3' C A 3 62.980 31.908 60.655 1.00 40.54 O
ATOM 11 C2' C A 3 62.688 32.074 58.241 1.00 40.62 C
ATOM 12 O2' C A 3 61.280 32.022 58.460 1.00 40.31 O
ATOM 13 C1' C A 3 62.962 33.255 57.313 1.00 41.03 C
ATOM 14 N1 C A 3 64.194 33.084 56.517 1.00 41.30 N
ATOM 15 C2 C A 3 64.297 32.234 55.370 1.00 41.19 C
ATOM 16 O2 C A 3 63.340 31.541 55.009 1.00 40.84 O
ATOM 17 N3 C A 3 65.470 32.144 54.686 1.00 41.50 N
ATOM 18 C4 C A 3 66.496 32.880 55.126 1.00 41.90 C
ATOM 19 N4 C A 3 67.642 32.833 54.455 1.00 42.23 N
ATOM 20 C5 C A 3 66.410 33.746 56.258 1.00 42.01 C
ATOM 21 C6 C A 3 65.267 33.830 56.924 1.00 41.72 C
ATOM 22 P U A 4 63.776 30.655 61.243 1.00 44.33 P
ATOM 23 OP1 U A 4 63.020 30.176 62.478 1.00 44.03 O
ATOM 24 OP2 U A 4 65.185 31.047 61.382 1.00 44.74 O
ATOM 25 O5' U A 4 63.603 29.599 60.070 1.00 44.08 O
TER
ATOM 1 O3' C B 3 62.980 31.908 60.655 1.00 40.54 O
ATOM 2 P U B 4 63.776 30.655 61.243 1.00 44.33 P
ATOM 3 OP1 U B 4 63.020 30.176 62.478 1.00 44.03 O
ATOM 4 OP2 U B 4 65.185 31.047 61.382 1.00 44.74 O
ATOM 5 O5' U B 4 63.603 29.599 60.070 1.00 44.08 O
ATOM 6 C5' U B 4 62.373 28.919 59.889 1.00 43.68 C
ATOM 7 C4' U B 4 62.500 27.893 58.828 1.00 43.53 C
ATOM 8 O4' U B 4 62.921 28.532 57.610 1.00 43.83 O
ATOM 9 C3' U B 4 63.559 26.863 59.066 1.00 43.53 C
ATOM 10 O3' U B 4 63.156 25.865 59.942 1.00 43.19 O
ATOM 11 C2' U B 4 63.883 26.371 57.668 1.00 43.59 C
ATOM 12 O2' U B 4 62.915 25.449 57.215 1.00 43.24 O
ATOM 13 C1' U B 4 63.737 27.657 56.866 1.00 43.88 C
ATOM 14 N1 U B 4 65.029 28.332 56.632 1.00 44.33 N
ATOM 15 C2 U B 4 65.792 27.890 55.589 1.00 44.50 C
ATOM 16 O2 U B 4 65.398 26.962 54.945 1.00 44.28 O
ATOM 17 N3 U B 4 66.974 28.560 55.369 1.00 44.95 N
ATOM 18 C4 U B 4 67.424 29.645 56.107 1.00 45.24 C
ATOM 19 O4 U B 4 68.477 30.200 55.814 1.00 45.67 O
ATOM 20 C5 U B 4 66.582 30.050 57.187 1.00 45.04 C
ATOM 21 C6 U B 4 65.443 29.401 57.413 1.00 44.60 C
ATOM 22 P U B 5 64.244 25.117 60.831 1.00 41.57 P
ATOM 23 OP1 U B 5 63.505 24.150 61.719 1.00 41.19 O
ATOM 24 OP2 U B 5 65.094 26.154 61.465 1.00 41.94 O
ATOM 25 O5' U B 5 65.094 24.331 59.735 1.00 41.67 O
TER
ATOM 2 P C A 3 66.344 35.658 60.652 1.00 42.33 P
ATOM 3 OP1 C A 3 66.178 35.771 62.123 1.00 42.30 O
ATOM 4 OP2 C A 3 67.692 35.291 60.110 1.00 42.58 O
ATOM 5 O5' C A 3 65.256 34.685 60.061 1.00 41.81 O
ATOM 6 C5' C A 3 63.886 34.857 60.366 1.00 41.53 C
ATOM 7 C4' C A 3 63.029 33.988 59.509 1.00 41.13 C
ATOM 8 O4' C A 3 63.132 34.381 58.128 1.00 41.32 O
ATOM 9 C3' C A 3 63.395 32.542 59.491 1.00 40.83 C
ATOM 10 O3' C A 3 62.980 31.908 60.655 1.00 40.54 O
ATOM 11 C2' C A 3 62.688 32.074 58.241 1.00 40.62 C
ATOM 12 O2' C A 3 61.280 32.022 58.460 1.00 40.31 O
ATOM 13 C1' C A 3 62.962 33.255 57.313 1.00 41.03 C
ATOM 14 N1 C A 3 64.194 33.084 56.517 1.00 41.30 N
ATOM 15 C2 C A 3 64.297 32.234 55.370 1.00 41.19 C
ATOM 16 O2 C A 3 63.340 31.541 55.009 1.00 40.84 O
ATOM 17 N3 C A 3 65.470 32.144 54.686 1.00 41.50 N
ATOM 18 C4 C A 3 66.496 32.880 55.126 1.00 41.90 C
ATOM 19 N4 C A 3 67.642 32.833 54.455 1.00 42.23 N
ATOM 20 C5 C A 3 66.410 33.746 56.258 1.00 42.01 C
ATOM 21 C6 C A 3 65.267 33.830 56.924 1.00 41.72 C
ATOM 22 P U A 4 63.776 30.655 61.243 1.00 44.33 P
ATOM 23 OP1 U A 4 63.020 30.176 62.478 1.00 44.03 O
ATOM 24 OP2 U A 4 65.185 31.047 61.382 1.00 44.74 O
ATOM 25 O5' U A 4 63.603 29.599 60.070 1.00 44.08 O
TER
ATOM 1 O3' C B 3 62.980 31.908 60.655 1.00 40.54 O
ATOM 2 P U B 4 63.776 30.655 61.243 1.00 44.33 P
ATOM 3 OP1 U B 4 63.020 30.176 62.478 1.00 44.03 O
ATOM 4 OP2 U B 4 65.185 31.047 61.382 1.00 44.74 O
ATOM 5 O5' U B 4 63.603 29.599 60.070 1.00 44.08 O
ATOM 6 C5' U B 4 62.373 28.919 59.889 1.00 43.68 C
ATOM 7 C4' U B 4 62.500 27.893 58.828 1.00 43.53 C
ATOM 8 O4' U B 4 62.921 28.532 57.610 1.00 43.83 O
ATOM 9 C3' U B 4 63.559 26.863 59.066 1.00 43.53 C
ATOM 10 O3' U B 4 63.156 25.865 59.942 1.00 43.19 O
ATOM 11 C2' U B 4 63.883 26.371 57.668 1.00 43.59 C
ATOM 12 O2' U B 4 62.915 25.449 57.215 1.00 43.24 O
ATOM 13 C1' U B 4 63.737 27.657 56.866 1.00 43.88 C
ATOM 14 N1 U B 4 65.029 28.332 56.632 1.00 44.33 N
ATOM 15 C2 U B 4 65.792 27.890 55.589 1.00 44.50 C
ATOM 16 O2 U B 4 65.398 26.962 54.945 1.00 44.28 O
ATOM 17 N3 U B 4 66.974 28.560 55.369 1.00 44.95 N
ATOM 18 C4 U B 4 67.424 29.645 56.107 1.00 45.24 C
ATOM 19 O4 U B 4 68.477 30.200 55.814 1.00 45.67 O
ATOM 20 C5 U B 4 66.582 30.050 57.187 1.00 45.04 C
ATOM 21 C6 U B 4 65.443 29.401 57.413 1.00 44.60 C
ATOM 22 P U B 5 64.244 25.117 60.831 1.00 41.57 P
ATOM 23 OP1 U B 5 63.505 24.150 61.719 1.00 41.19 O
ATOM 24 OP2 U B 5 65.094 26.154 61.465 1.00 41.94 O
ATOM 25 O5' U B 5 65.094 24.331 59.735 1.00 41.67 O
TER
Atoms:
C2: (64.297,32.234,55.370)
OP1: (66.178,35.771,62.123)
OP2: (67.692,35.291,60.110)
C4: (66.496,32.880,55.126)
O5': (65.256,34.685,60.061)
C3': (63.395,32.542,59.491)
C1': (62.962,33.255,57.313)
O4': (63.132,34.381,58.128)
C5': (63.886,34.857,60.366)
P: (66.344,35.658,60.652)
O2: (63.340,31.541,55.009)
C4': (63.029,33.988,59.509)
C2': (62.688,32.074,58.241)
O2': (61.280,32.022,58.460)
N1: (64.194,33.084,56.517)
N3: (65.470,32.144,54.686)
N4: (67.642,32.833,54.455)
C6: (65.267,33.830,56.924)
C5: (66.410,33.746,56.258)
O3': (62.980,31.908,60.655)
OP1: (66.178,35.771,62.123)
OP2: (67.692,35.291,60.110)
C4: (66.496,32.880,55.126)
O5': (65.256,34.685,60.061)
C3': (63.395,32.542,59.491)
C1': (62.962,33.255,57.313)
O4': (63.132,34.381,58.128)
C5': (63.886,34.857,60.366)
P: (66.344,35.658,60.652)
O2: (63.340,31.541,55.009)
C4': (63.029,33.988,59.509)
C2': (62.688,32.074,58.241)
O2': (61.280,32.022,58.460)
N1: (64.194,33.084,56.517)
N3: (65.470,32.144,54.686)
N4: (67.642,32.833,54.455)
C6: (65.267,33.830,56.924)
C5: (66.410,33.746,56.258)
O3': (62.980,31.908,60.655)
C4: (67.424,29.645,56.107)
N3: (66.974,28.560,55.369)
OP1: (63.020,30.176,62.478)
OP2: (65.185,31.047,61.382)
C2: (65.792,27.890,55.589)
C1': (63.737,27.657,56.866)
C3': (63.559,26.863,59.066)
O5': (63.603,29.599,60.070)
O4': (62.921,28.532,57.610)
C5': (62.373,28.919,59.889)
P: (63.776,30.655,61.243)
C4': (62.500,27.893,58.828)
C2': (63.883,26.371,57.668)
O2': (62.915,25.449,57.215)
N1: (65.029,28.332,56.632)
O4: (68.477,30.200,55.814)
O2: (65.398,26.962,54.945)
C6: (65.443,29.401,57.413)
C5: (66.582,30.050,57.187)
O3': (63.156,25.865,59.942)
N3: (66.974,28.560,55.369)
OP1: (63.020,30.176,62.478)
OP2: (65.185,31.047,61.382)
C2: (65.792,27.890,55.589)
C1': (63.737,27.657,56.866)
C3': (63.559,26.863,59.066)
O5': (63.603,29.599,60.070)
O4': (62.921,28.532,57.610)
C5': (62.373,28.919,59.889)
P: (63.776,30.655,61.243)
C4': (62.500,27.893,58.828)
C2': (63.883,26.371,57.668)
O2': (62.915,25.449,57.215)
N1: (65.029,28.332,56.632)
O4: (68.477,30.200,55.814)
O2: (65.398,26.962,54.945)
C6: (65.443,29.401,57.413)
C5: (66.582,30.050,57.187)
O3': (63.156,25.865,59.942)
Image (generated by PyMOL):