Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0601:0602
Extra
PDB:
ATOM 1 O3' U A 600 18.806 132.118 101.687 1.00 57.13 O
ATOM 2 P C A 601 19.422 130.832 102.434 1.00 57.91 P
ATOM 3 OP1 C A 601 20.368 131.370 103.442 1.00 57.60 O
ATOM 4 OP2 C A 601 19.895 129.846 101.429 1.00 55.92 O
ATOM 5 O5' C A 601 18.190 130.189 103.207 1.00 57.16 O
ATOM 6 C5' C A 601 17.575 130.889 104.295 1.00 57.31 C
ATOM 7 C4' C A 601 16.408 130.103 104.826 1.00 57.17 C
ATOM 8 O4' C A 601 15.384 130.011 103.805 1.00 57.25 O
ATOM 9 C3' C A 601 16.705 128.656 105.166 1.00 58.68 C
ATOM 10 O3' C A 601 17.337 128.518 106.434 1.00 58.82 O
ATOM 11 C2' C A 601 15.321 128.027 105.109 1.00 57.85 C
ATOM 12 O2' C A 601 14.547 128.286 106.262 1.00 60.18 O
ATOM 13 C1' C A 601 14.715 128.766 103.916 1.00 56.56 C
ATOM 14 N1 C A 601 14.858 128.030 102.646 1.00 55.89 N
ATOM 15 C2 C A 601 13.996 126.963 102.397 1.00 56.34 C
ATOM 16 O2 C A 601 13.149 126.668 103.252 1.00 59.72 O
ATOM 17 N3 C A 601 14.103 126.277 101.240 1.00 54.70 N
ATOM 18 C4 C A 601 15.024 126.622 100.346 1.00 53.49 C
ATOM 19 N4 C A 601 15.078 125.926 99.213 1.00 52.93 N
ATOM 20 C5 C A 601 15.925 127.700 100.572 1.00 54.73 C
ATOM 21 C6 C A 601 15.809 128.373 101.725 1.00 55.34 C
ATOM 22 P U A 602 18.381 127.321 106.672 1.00 57.90 P
ATOM 23 OP1 U A 602 19.044 127.609 107.967 1.00 57.85 O
ATOM 24 OP2 U A 602 19.204 127.125 105.448 1.00 57.06 O
ATOM 25 O5' U A 602 17.450 126.042 106.835 1.00 55.50 O
TER
ATOM 1 O3' C B 601 17.337 128.518 106.434 1.00 58.82 O
ATOM 2 P U B 602 18.381 127.321 106.672 1.00 57.90 P
ATOM 3 OP1 U B 602 19.044 127.609 107.967 1.00 57.85 O
ATOM 4 OP2 U B 602 19.204 127.125 105.448 1.00 57.06 O
ATOM 5 O5' U B 602 17.450 126.042 106.835 1.00 55.50 O
ATOM 6 C5' U B 602 16.585 125.910 107.965 1.00 52.86 C
ATOM 7 C4' U B 602 15.766 124.657 107.839 1.00 53.44 C
ATOM 8 O4' U B 602 14.886 124.784 106.698 1.00 53.24 O
ATOM 9 C3' U B 602 16.535 123.382 107.550 1.00 54.41 C
ATOM 10 O3' U B 602 17.102 122.816 108.723 1.00 57.68 O
ATOM 11 C2' U B 602 15.455 122.496 106.951 1.00 53.01 C
ATOM 12 O2' U B 602 14.598 121.947 107.933 1.00 53.55 O
ATOM 13 C1' U B 602 14.682 123.511 106.107 1.00 51.85 C
ATOM 14 N1 U B 602 15.137 123.563 104.709 1.00 50.27 N
ATOM 15 C2 U B 602 14.838 122.483 103.890 1.00 49.94 C
ATOM 16 O2 U B 602 14.199 121.511 104.264 1.00 50.18 O
ATOM 17 N3 U B 602 15.316 122.582 102.610 1.00 50.54 N
ATOM 18 C4 U B 602 16.044 123.619 102.067 1.00 49.61 C
ATOM 19 O4 U B 602 16.466 123.514 100.915 1.00 49.37 O
ATOM 20 C5 U B 602 16.297 124.706 102.963 1.00 48.02 C
ATOM 21 C6 U B 602 15.849 124.644 104.220 1.00 49.22 C
ATOM 22 P G B 603 18.361 121.824 108.598 1.00 57.37 P
ATOM 23 OP1 G B 603 18.807 121.551 109.987 1.00 58.99 O
ATOM 24 OP2 G B 603 19.323 122.378 107.612 1.00 55.66 O
ATOM 25 O5' G B 603 17.739 120.492 107.992 1.00 54.39 O
TER
ATOM 2 P C A 601 19.422 130.832 102.434 1.00 57.91 P
ATOM 3 OP1 C A 601 20.368 131.370 103.442 1.00 57.60 O
ATOM 4 OP2 C A 601 19.895 129.846 101.429 1.00 55.92 O
ATOM 5 O5' C A 601 18.190 130.189 103.207 1.00 57.16 O
ATOM 6 C5' C A 601 17.575 130.889 104.295 1.00 57.31 C
ATOM 7 C4' C A 601 16.408 130.103 104.826 1.00 57.17 C
ATOM 8 O4' C A 601 15.384 130.011 103.805 1.00 57.25 O
ATOM 9 C3' C A 601 16.705 128.656 105.166 1.00 58.68 C
ATOM 10 O3' C A 601 17.337 128.518 106.434 1.00 58.82 O
ATOM 11 C2' C A 601 15.321 128.027 105.109 1.00 57.85 C
ATOM 12 O2' C A 601 14.547 128.286 106.262 1.00 60.18 O
ATOM 13 C1' C A 601 14.715 128.766 103.916 1.00 56.56 C
ATOM 14 N1 C A 601 14.858 128.030 102.646 1.00 55.89 N
ATOM 15 C2 C A 601 13.996 126.963 102.397 1.00 56.34 C
ATOM 16 O2 C A 601 13.149 126.668 103.252 1.00 59.72 O
ATOM 17 N3 C A 601 14.103 126.277 101.240 1.00 54.70 N
ATOM 18 C4 C A 601 15.024 126.622 100.346 1.00 53.49 C
ATOM 19 N4 C A 601 15.078 125.926 99.213 1.00 52.93 N
ATOM 20 C5 C A 601 15.925 127.700 100.572 1.00 54.73 C
ATOM 21 C6 C A 601 15.809 128.373 101.725 1.00 55.34 C
ATOM 22 P U A 602 18.381 127.321 106.672 1.00 57.90 P
ATOM 23 OP1 U A 602 19.044 127.609 107.967 1.00 57.85 O
ATOM 24 OP2 U A 602 19.204 127.125 105.448 1.00 57.06 O
ATOM 25 O5' U A 602 17.450 126.042 106.835 1.00 55.50 O
TER
ATOM 1 O3' C B 601 17.337 128.518 106.434 1.00 58.82 O
ATOM 2 P U B 602 18.381 127.321 106.672 1.00 57.90 P
ATOM 3 OP1 U B 602 19.044 127.609 107.967 1.00 57.85 O
ATOM 4 OP2 U B 602 19.204 127.125 105.448 1.00 57.06 O
ATOM 5 O5' U B 602 17.450 126.042 106.835 1.00 55.50 O
ATOM 6 C5' U B 602 16.585 125.910 107.965 1.00 52.86 C
ATOM 7 C4' U B 602 15.766 124.657 107.839 1.00 53.44 C
ATOM 8 O4' U B 602 14.886 124.784 106.698 1.00 53.24 O
ATOM 9 C3' U B 602 16.535 123.382 107.550 1.00 54.41 C
ATOM 10 O3' U B 602 17.102 122.816 108.723 1.00 57.68 O
ATOM 11 C2' U B 602 15.455 122.496 106.951 1.00 53.01 C
ATOM 12 O2' U B 602 14.598 121.947 107.933 1.00 53.55 O
ATOM 13 C1' U B 602 14.682 123.511 106.107 1.00 51.85 C
ATOM 14 N1 U B 602 15.137 123.563 104.709 1.00 50.27 N
ATOM 15 C2 U B 602 14.838 122.483 103.890 1.00 49.94 C
ATOM 16 O2 U B 602 14.199 121.511 104.264 1.00 50.18 O
ATOM 17 N3 U B 602 15.316 122.582 102.610 1.00 50.54 N
ATOM 18 C4 U B 602 16.044 123.619 102.067 1.00 49.61 C
ATOM 19 O4 U B 602 16.466 123.514 100.915 1.00 49.37 O
ATOM 20 C5 U B 602 16.297 124.706 102.963 1.00 48.02 C
ATOM 21 C6 U B 602 15.849 124.644 104.220 1.00 49.22 C
ATOM 22 P G B 603 18.361 121.824 108.598 1.00 57.37 P
ATOM 23 OP1 G B 603 18.807 121.551 109.987 1.00 58.99 O
ATOM 24 OP2 G B 603 19.323 122.378 107.612 1.00 55.66 O
ATOM 25 O5' G B 603 17.739 120.492 107.992 1.00 54.39 O
TER
Atoms:
C2: (13.996,126.963,102.397)
OP1: (20.368,131.370,103.442)
OP2: (19.895,129.846,101.429)
C4: (15.024,126.622,100.346)
O5': (18.190,130.189,103.207)
C3': (16.705,128.656,105.166)
C1': (14.715,128.766,103.916)
O4': (15.384,130.011,103.805)
C5': (17.575,130.889,104.295)
P: (19.422,130.832,102.434)
O2: (13.149,126.668,103.252)
C4': (16.408,130.103,104.826)
C2': (15.321,128.027,105.109)
O2': (14.547,128.286,106.262)
N1: (14.858,128.030,102.646)
N3: (14.103,126.277,101.240)
N4: (15.078,125.926,99.213)
C6: (15.809,128.373,101.725)
C5: (15.925,127.700,100.572)
O3': (17.337,128.518,106.434)
OP1: (20.368,131.370,103.442)
OP2: (19.895,129.846,101.429)
C4: (15.024,126.622,100.346)
O5': (18.190,130.189,103.207)
C3': (16.705,128.656,105.166)
C1': (14.715,128.766,103.916)
O4': (15.384,130.011,103.805)
C5': (17.575,130.889,104.295)
P: (19.422,130.832,102.434)
O2: (13.149,126.668,103.252)
C4': (16.408,130.103,104.826)
C2': (15.321,128.027,105.109)
O2': (14.547,128.286,106.262)
N1: (14.858,128.030,102.646)
N3: (14.103,126.277,101.240)
N4: (15.078,125.926,99.213)
C6: (15.809,128.373,101.725)
C5: (15.925,127.700,100.572)
O3': (17.337,128.518,106.434)
C4: (16.044,123.619,102.067)
N3: (15.316,122.582,102.610)
OP1: (19.044,127.609,107.967)
OP2: (19.204,127.125,105.448)
C2: (14.838,122.483,103.890)
C1': (14.682,123.511,106.107)
C3': (16.535,123.382,107.550)
O5': (17.450,126.042,106.835)
O4': (14.886,124.784,106.698)
C5': (16.585,125.910,107.965)
P: (18.381,127.321,106.672)
C4': (15.766,124.657,107.839)
C2': (15.455,122.496,106.951)
O2': (14.598,121.947,107.933)
N1: (15.137,123.563,104.709)
O4: (16.466,123.514,100.915)
O2: (14.199,121.511,104.264)
C6: (15.849,124.644,104.220)
C5: (16.297,124.706,102.963)
O3': (17.102,122.816,108.723)
N3: (15.316,122.582,102.610)
OP1: (19.044,127.609,107.967)
OP2: (19.204,127.125,105.448)
C2: (14.838,122.483,103.890)
C1': (14.682,123.511,106.107)
C3': (16.535,123.382,107.550)
O5': (17.450,126.042,106.835)
O4': (14.886,124.784,106.698)
C5': (16.585,125.910,107.965)
P: (18.381,127.321,106.672)
C4': (15.766,124.657,107.839)
C2': (15.455,122.496,106.951)
O2': (14.598,121.947,107.933)
N1: (15.137,123.563,104.709)
O4: (16.466,123.514,100.915)
O2: (14.199,121.511,104.264)
C6: (15.849,124.644,104.220)
C5: (16.297,124.706,102.963)
O3': (17.102,122.816,108.723)
Image (generated by PyMOL):