Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:019:020
Extra
PDB:
ATOM 1 O3' G A 18 23.782 132.376 53.416 1.00 40.38 O
ATOM 2 P C A 19 24.941 131.919 52.402 1.00 41.02 P
ATOM 3 OP1 C A 19 24.255 131.319 51.235 1.00 43.70 O
ATOM 4 OP2 C A 19 25.961 131.127 53.127 1.00 40.30 O
ATOM 5 O5' C A 19 25.605 133.293 51.945 1.00 41.17 O
ATOM 6 C5' C A 19 24.807 134.326 51.350 1.00 40.73 C
ATOM 7 C4' C A 19 25.618 135.587 51.174 1.00 41.57 C
ATOM 8 O4' C A 19 26.033 136.100 52.467 1.00 41.71 O
ATOM 9 C3' C A 19 26.924 135.452 50.415 1.00 43.55 C
ATOM 10 O3' C A 19 26.707 135.413 49.007 1.00 46.35 O
ATOM 11 C2' C A 19 27.662 136.710 50.855 1.00 42.41 C
ATOM 12 O2' C A 19 27.190 137.878 50.209 1.00 40.87 O
ATOM 13 C1' C A 19 27.264 136.787 52.329 1.00 40.41 C
ATOM 14 N1 C A 19 28.264 136.195 53.240 1.00 41.59 N
ATOM 15 C2 C A 19 29.386 136.961 53.582 1.00 42.65 C
ATOM 16 O2 C A 19 29.494 138.104 53.114 1.00 44.58 O
ATOM 17 N3 C A 19 30.323 136.441 54.410 1.00 41.08 N
ATOM 18 C4 C A 19 30.178 135.206 54.889 1.00 41.43 C
ATOM 19 N4 C A 19 31.142 134.729 55.688 1.00 38.31 N
ATOM 20 C5 C A 19 29.043 134.402 54.565 1.00 42.09 C
ATOM 21 C6 C A 19 28.118 134.932 53.746 1.00 42.46 C
ATOM 22 P U A 20 27.620 134.464 48.083 1.00 50.23 P
ATOM 23 OP1 U A 20 26.990 134.460 46.738 1.00 51.88 O
ATOM 24 OP2 U A 20 27.857 133.173 48.781 1.00 49.61 O
ATOM 25 O5' U A 20 29.018 135.229 47.990 1.00 49.44 O
TER
ATOM 1 O3' C B 19 26.707 135.413 49.007 1.00 46.35 O
ATOM 2 P U B 20 27.620 134.464 48.083 1.00 50.23 P
ATOM 3 OP1 U B 20 26.990 134.460 46.738 1.00 51.88 O
ATOM 4 OP2 U B 20 27.857 133.173 48.781 1.00 49.61 O
ATOM 5 O5' U B 20 29.018 135.229 47.990 1.00 49.44 O
ATOM 6 C5' U B 20 29.078 136.653 47.790 1.00 46.61 C
ATOM 7 C4' U B 20 30.519 137.127 47.763 1.00 47.21 C
ATOM 8 O4' U B 20 31.095 137.064 49.101 1.00 45.83 O
ATOM 9 C3' U B 20 31.477 136.367 46.845 1.00 45.36 C
ATOM 10 O3' U B 20 32.410 137.256 46.246 1.00 48.75 O
ATOM 11 C2' U B 20 32.240 135.477 47.815 1.00 45.05 C
ATOM 12 O2' U B 20 33.534 135.162 47.339 1.00 47.14 O
ATOM 13 C1' U B 20 32.328 136.379 49.044 1.00 44.45 C
ATOM 14 N1 U B 20 32.544 135.666 50.314 1.00 44.19 N
ATOM 15 C2 U B 20 33.488 136.179 51.200 1.00 44.45 C
ATOM 16 O2 U B 20 34.105 137.213 51.000 1.00 44.59 O
ATOM 17 N3 U B 20 33.681 135.433 52.337 1.00 43.88 N
ATOM 18 C4 U B 20 33.043 134.260 52.677 1.00 43.35 C
ATOM 19 O4 U B 20 33.343 133.692 53.725 1.00 41.83 O
ATOM 20 C5 U B 20 32.065 133.815 51.734 1.00 44.08 C
ATOM 21 C6 U B 20 31.852 134.515 50.616 1.00 44.08 C
ATOM 22 P C B 21 32.236 137.671 44.706 1.00 48.64 P
ATOM 23 OP1 C B 21 31.800 139.088 44.696 1.00 48.47 O
ATOM 24 OP2 C B 21 31.412 136.647 44.025 1.00 53.38 O
ATOM 25 O5' C B 21 33.680 137.542 44.055 1.00 50.33 O
TER
ATOM 2 P C A 19 24.941 131.919 52.402 1.00 41.02 P
ATOM 3 OP1 C A 19 24.255 131.319 51.235 1.00 43.70 O
ATOM 4 OP2 C A 19 25.961 131.127 53.127 1.00 40.30 O
ATOM 5 O5' C A 19 25.605 133.293 51.945 1.00 41.17 O
ATOM 6 C5' C A 19 24.807 134.326 51.350 1.00 40.73 C
ATOM 7 C4' C A 19 25.618 135.587 51.174 1.00 41.57 C
ATOM 8 O4' C A 19 26.033 136.100 52.467 1.00 41.71 O
ATOM 9 C3' C A 19 26.924 135.452 50.415 1.00 43.55 C
ATOM 10 O3' C A 19 26.707 135.413 49.007 1.00 46.35 O
ATOM 11 C2' C A 19 27.662 136.710 50.855 1.00 42.41 C
ATOM 12 O2' C A 19 27.190 137.878 50.209 1.00 40.87 O
ATOM 13 C1' C A 19 27.264 136.787 52.329 1.00 40.41 C
ATOM 14 N1 C A 19 28.264 136.195 53.240 1.00 41.59 N
ATOM 15 C2 C A 19 29.386 136.961 53.582 1.00 42.65 C
ATOM 16 O2 C A 19 29.494 138.104 53.114 1.00 44.58 O
ATOM 17 N3 C A 19 30.323 136.441 54.410 1.00 41.08 N
ATOM 18 C4 C A 19 30.178 135.206 54.889 1.00 41.43 C
ATOM 19 N4 C A 19 31.142 134.729 55.688 1.00 38.31 N
ATOM 20 C5 C A 19 29.043 134.402 54.565 1.00 42.09 C
ATOM 21 C6 C A 19 28.118 134.932 53.746 1.00 42.46 C
ATOM 22 P U A 20 27.620 134.464 48.083 1.00 50.23 P
ATOM 23 OP1 U A 20 26.990 134.460 46.738 1.00 51.88 O
ATOM 24 OP2 U A 20 27.857 133.173 48.781 1.00 49.61 O
ATOM 25 O5' U A 20 29.018 135.229 47.990 1.00 49.44 O
TER
ATOM 1 O3' C B 19 26.707 135.413 49.007 1.00 46.35 O
ATOM 2 P U B 20 27.620 134.464 48.083 1.00 50.23 P
ATOM 3 OP1 U B 20 26.990 134.460 46.738 1.00 51.88 O
ATOM 4 OP2 U B 20 27.857 133.173 48.781 1.00 49.61 O
ATOM 5 O5' U B 20 29.018 135.229 47.990 1.00 49.44 O
ATOM 6 C5' U B 20 29.078 136.653 47.790 1.00 46.61 C
ATOM 7 C4' U B 20 30.519 137.127 47.763 1.00 47.21 C
ATOM 8 O4' U B 20 31.095 137.064 49.101 1.00 45.83 O
ATOM 9 C3' U B 20 31.477 136.367 46.845 1.00 45.36 C
ATOM 10 O3' U B 20 32.410 137.256 46.246 1.00 48.75 O
ATOM 11 C2' U B 20 32.240 135.477 47.815 1.00 45.05 C
ATOM 12 O2' U B 20 33.534 135.162 47.339 1.00 47.14 O
ATOM 13 C1' U B 20 32.328 136.379 49.044 1.00 44.45 C
ATOM 14 N1 U B 20 32.544 135.666 50.314 1.00 44.19 N
ATOM 15 C2 U B 20 33.488 136.179 51.200 1.00 44.45 C
ATOM 16 O2 U B 20 34.105 137.213 51.000 1.00 44.59 O
ATOM 17 N3 U B 20 33.681 135.433 52.337 1.00 43.88 N
ATOM 18 C4 U B 20 33.043 134.260 52.677 1.00 43.35 C
ATOM 19 O4 U B 20 33.343 133.692 53.725 1.00 41.83 O
ATOM 20 C5 U B 20 32.065 133.815 51.734 1.00 44.08 C
ATOM 21 C6 U B 20 31.852 134.515 50.616 1.00 44.08 C
ATOM 22 P C B 21 32.236 137.671 44.706 1.00 48.64 P
ATOM 23 OP1 C B 21 31.800 139.088 44.696 1.00 48.47 O
ATOM 24 OP2 C B 21 31.412 136.647 44.025 1.00 53.38 O
ATOM 25 O5' C B 21 33.680 137.542 44.055 1.00 50.33 O
TER
Atoms:
C2: (29.386,136.961,53.582)
OP1: (24.255,131.319,51.235)
OP2: (25.961,131.127,53.127)
C4: (30.178,135.206,54.889)
O5': (25.605,133.293,51.945)
C3': (26.924,135.452,50.415)
C1': (27.264,136.787,52.329)
O4': (26.033,136.100,52.467)
C5': (24.807,134.326,51.350)
P: (24.941,131.919,52.402)
O2: (29.494,138.104,53.114)
C4': (25.618,135.587,51.174)
C2': (27.662,136.710,50.855)
O2': (27.190,137.878,50.209)
N1: (28.264,136.195,53.240)
N3: (30.323,136.441,54.410)
N4: (31.142,134.729,55.688)
C6: (28.118,134.932,53.746)
C5: (29.043,134.402,54.565)
O3': (26.707,135.413,49.007)
OP1: (24.255,131.319,51.235)
OP2: (25.961,131.127,53.127)
C4: (30.178,135.206,54.889)
O5': (25.605,133.293,51.945)
C3': (26.924,135.452,50.415)
C1': (27.264,136.787,52.329)
O4': (26.033,136.100,52.467)
C5': (24.807,134.326,51.350)
P: (24.941,131.919,52.402)
O2: (29.494,138.104,53.114)
C4': (25.618,135.587,51.174)
C2': (27.662,136.710,50.855)
O2': (27.190,137.878,50.209)
N1: (28.264,136.195,53.240)
N3: (30.323,136.441,54.410)
N4: (31.142,134.729,55.688)
C6: (28.118,134.932,53.746)
C5: (29.043,134.402,54.565)
O3': (26.707,135.413,49.007)
C4: (33.043,134.260,52.677)
N3: (33.681,135.433,52.337)
OP1: (26.990,134.460,46.738)
OP2: (27.857,133.173,48.781)
C2: (33.488,136.179,51.200)
C1': (32.328,136.379,49.044)
C3': (31.477,136.367,46.845)
O5': (29.018,135.229,47.990)
O4': (31.095,137.064,49.101)
C5': (29.078,136.653,47.790)
P: (27.620,134.464,48.083)
C4': (30.519,137.127,47.763)
C2': (32.240,135.477,47.815)
O2': (33.534,135.162,47.339)
N1: (32.544,135.666,50.314)
O4: (33.343,133.692,53.725)
O2: (34.105,137.213,51.000)
C6: (31.852,134.515,50.616)
C5: (32.065,133.815,51.734)
O3': (32.410,137.256,46.246)
N3: (33.681,135.433,52.337)
OP1: (26.990,134.460,46.738)
OP2: (27.857,133.173,48.781)
C2: (33.488,136.179,51.200)
C1': (32.328,136.379,49.044)
C3': (31.477,136.367,46.845)
O5': (29.018,135.229,47.990)
O4': (31.095,137.064,49.101)
C5': (29.078,136.653,47.790)
P: (27.620,134.464,48.083)
C4': (30.519,137.127,47.763)
C2': (32.240,135.477,47.815)
O2': (33.534,135.162,47.339)
N1: (32.544,135.666,50.314)
O4: (33.343,133.692,53.725)
O2: (34.105,137.213,51.000)
C6: (31.852,134.515,50.616)
C5: (32.065,133.815,51.734)
O3': (32.410,137.256,46.246)
Image (generated by PyMOL):