Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01145:01146
Extra
PDB:
ATOM 1 O3' U A1144 59.024 67.679 193.810 1.00110.88 O
ATOM 2 P C A1145 57.425 67.619 193.860 1.00109.81 P
ATOM 3 OP1 C A1145 57.041 67.017 195.162 1.00110.31 O
ATOM 4 OP2 C A1145 56.941 67.010 192.597 1.00110.58 O
ATOM 5 O5' C A1145 56.995 69.148 193.871 1.00109.62 O
ATOM 6 C5' C A1145 57.319 69.993 194.984 1.00108.60 C
ATOM 7 C4' C A1145 56.838 71.393 194.720 1.00107.96 C
ATOM 8 O4' C A1145 57.619 71.995 193.656 1.00107.34 O
ATOM 9 C3' C A1145 55.412 71.482 194.214 1.00107.82 C
ATOM 10 O3' C A1145 54.471 71.377 195.273 1.00107.49 O
ATOM 11 C2' C A1145 55.403 72.846 193.542 1.00108.40 C
ATOM 12 O2' C A1145 55.314 73.905 194.474 1.00109.26 O
ATOM 13 C1' C A1145 56.792 72.870 192.903 1.00108.32 C
ATOM 14 N1 C A1145 56.813 72.455 191.486 1.00108.83 N
ATOM 15 C2 C A1145 56.528 73.411 190.495 1.00108.69 C
ATOM 16 O2 C A1145 56.218 74.564 190.836 1.00108.68 O
ATOM 17 N3 C A1145 56.597 73.053 189.194 1.00108.55 N
ATOM 18 C4 C A1145 56.929 71.805 188.861 1.00108.85 C
ATOM 19 N4 C A1145 57.021 71.508 187.561 1.00108.62 N
ATOM 20 C5 C A1145 57.191 70.806 189.843 1.00109.43 C
ATOM 21 C6 C A1145 57.119 71.170 191.131 1.00109.55 C
ATOM 22 P U A1146 53.079 70.615 195.023 1.00107.02 P
ATOM 23 OP1 U A1146 52.209 70.825 196.213 1.00105.49 O
ATOM 24 OP2 U A1146 53.414 69.235 194.589 1.00106.76 O
ATOM 25 O5' U A1146 52.436 71.386 193.780 1.00106.85 O
TER
ATOM 1 O3' C B1145 54.471 71.377 195.273 1.00107.49 O
ATOM 2 P U B1146 53.079 70.615 195.023 1.00107.02 P
ATOM 3 OP1 U B1146 52.209 70.825 196.213 1.00105.49 O
ATOM 4 OP2 U B1146 53.414 69.235 194.589 1.00106.76 O
ATOM 5 O5' U B1146 52.436 71.386 193.780 1.00106.85 O
ATOM 6 C5' U B1146 52.071 72.777 193.888 1.00104.72 C
ATOM 7 C4' U B1146 51.813 73.383 192.524 1.00102.68 C
ATOM 8 O4' U B1146 52.947 73.166 191.650 1.00101.51 O
ATOM 9 C3' U B1146 50.698 72.793 191.680 1.00102.00 C
ATOM 10 O3' U B1146 49.414 73.222 192.128 1.00101.67 O
ATOM 11 C2' U B1146 51.005 73.399 190.315 1.00101.71 C
ATOM 12 O2' U B1146 50.522 74.716 190.212 1.00102.58 O
ATOM 13 C1' U B1146 52.536 73.436 190.325 1.00101.58 C
ATOM 14 N1 U B1146 53.149 72.475 189.397 1.00101.82 N
ATOM 15 C2 U B1146 53.573 72.965 188.175 1.00102.06 C
ATOM 16 O2 U B1146 53.513 74.140 187.880 1.00102.41 O
ATOM 17 N3 U B1146 54.070 72.028 187.308 1.00102.68 N
ATOM 18 C4 U B1146 54.196 70.678 187.532 1.00103.64 C
ATOM 19 O4 U B1146 54.639 69.956 186.633 1.00104.04 O
ATOM 20 C5 U B1146 53.769 70.247 188.832 1.00103.46 C
ATOM 21 C6 U B1146 53.275 71.140 189.700 1.00102.72 C
ATOM 22 P A B1147 48.083 72.544 191.526 1.00100.77 P
ATOM 23 OP1 A B1147 46.931 72.932 192.382 1.00101.32 O
ATOM 24 OP2 A B1147 48.356 71.107 191.278 1.00100.62 O
ATOM 25 O5' A B1147 47.892 73.246 190.112 1.00100.38 O
TER
ATOM 2 P C A1145 57.425 67.619 193.860 1.00109.81 P
ATOM 3 OP1 C A1145 57.041 67.017 195.162 1.00110.31 O
ATOM 4 OP2 C A1145 56.941 67.010 192.597 1.00110.58 O
ATOM 5 O5' C A1145 56.995 69.148 193.871 1.00109.62 O
ATOM 6 C5' C A1145 57.319 69.993 194.984 1.00108.60 C
ATOM 7 C4' C A1145 56.838 71.393 194.720 1.00107.96 C
ATOM 8 O4' C A1145 57.619 71.995 193.656 1.00107.34 O
ATOM 9 C3' C A1145 55.412 71.482 194.214 1.00107.82 C
ATOM 10 O3' C A1145 54.471 71.377 195.273 1.00107.49 O
ATOM 11 C2' C A1145 55.403 72.846 193.542 1.00108.40 C
ATOM 12 O2' C A1145 55.314 73.905 194.474 1.00109.26 O
ATOM 13 C1' C A1145 56.792 72.870 192.903 1.00108.32 C
ATOM 14 N1 C A1145 56.813 72.455 191.486 1.00108.83 N
ATOM 15 C2 C A1145 56.528 73.411 190.495 1.00108.69 C
ATOM 16 O2 C A1145 56.218 74.564 190.836 1.00108.68 O
ATOM 17 N3 C A1145 56.597 73.053 189.194 1.00108.55 N
ATOM 18 C4 C A1145 56.929 71.805 188.861 1.00108.85 C
ATOM 19 N4 C A1145 57.021 71.508 187.561 1.00108.62 N
ATOM 20 C5 C A1145 57.191 70.806 189.843 1.00109.43 C
ATOM 21 C6 C A1145 57.119 71.170 191.131 1.00109.55 C
ATOM 22 P U A1146 53.079 70.615 195.023 1.00107.02 P
ATOM 23 OP1 U A1146 52.209 70.825 196.213 1.00105.49 O
ATOM 24 OP2 U A1146 53.414 69.235 194.589 1.00106.76 O
ATOM 25 O5' U A1146 52.436 71.386 193.780 1.00106.85 O
TER
ATOM 1 O3' C B1145 54.471 71.377 195.273 1.00107.49 O
ATOM 2 P U B1146 53.079 70.615 195.023 1.00107.02 P
ATOM 3 OP1 U B1146 52.209 70.825 196.213 1.00105.49 O
ATOM 4 OP2 U B1146 53.414 69.235 194.589 1.00106.76 O
ATOM 5 O5' U B1146 52.436 71.386 193.780 1.00106.85 O
ATOM 6 C5' U B1146 52.071 72.777 193.888 1.00104.72 C
ATOM 7 C4' U B1146 51.813 73.383 192.524 1.00102.68 C
ATOM 8 O4' U B1146 52.947 73.166 191.650 1.00101.51 O
ATOM 9 C3' U B1146 50.698 72.793 191.680 1.00102.00 C
ATOM 10 O3' U B1146 49.414 73.222 192.128 1.00101.67 O
ATOM 11 C2' U B1146 51.005 73.399 190.315 1.00101.71 C
ATOM 12 O2' U B1146 50.522 74.716 190.212 1.00102.58 O
ATOM 13 C1' U B1146 52.536 73.436 190.325 1.00101.58 C
ATOM 14 N1 U B1146 53.149 72.475 189.397 1.00101.82 N
ATOM 15 C2 U B1146 53.573 72.965 188.175 1.00102.06 C
ATOM 16 O2 U B1146 53.513 74.140 187.880 1.00102.41 O
ATOM 17 N3 U B1146 54.070 72.028 187.308 1.00102.68 N
ATOM 18 C4 U B1146 54.196 70.678 187.532 1.00103.64 C
ATOM 19 O4 U B1146 54.639 69.956 186.633 1.00104.04 O
ATOM 20 C5 U B1146 53.769 70.247 188.832 1.00103.46 C
ATOM 21 C6 U B1146 53.275 71.140 189.700 1.00102.72 C
ATOM 22 P A B1147 48.083 72.544 191.526 1.00100.77 P
ATOM 23 OP1 A B1147 46.931 72.932 192.382 1.00101.32 O
ATOM 24 OP2 A B1147 48.356 71.107 191.278 1.00100.62 O
ATOM 25 O5' A B1147 47.892 73.246 190.112 1.00100.38 O
TER
Atoms:
C2: (56.528,73.411,190.495)
OP1: (57.041,67.017,195.162)
OP2: (56.941,67.010,192.597)
C4: (56.929,71.805,188.861)
O5': (56.995,69.148,193.871)
C3': (55.412,71.482,194.214)
C1': (56.792,72.870,192.903)
O4': (57.619,71.995,193.656)
C5': (57.319,69.993,194.984)
P: (57.425,67.619,193.860)
O2: (56.218,74.564,190.836)
C4': (56.838,71.393,194.720)
C2': (55.403,72.846,193.542)
O2': (55.314,73.905,194.474)
N1: (56.813,72.455,191.486)
N3: (56.597,73.053,189.194)
N4: (57.021,71.508,187.561)
C6: (57.119,71.170,191.131)
C5: (57.191,70.806,189.843)
O3': (54.471,71.377,195.273)
OP1: (57.041,67.017,195.162)
OP2: (56.941,67.010,192.597)
C4: (56.929,71.805,188.861)
O5': (56.995,69.148,193.871)
C3': (55.412,71.482,194.214)
C1': (56.792,72.870,192.903)
O4': (57.619,71.995,193.656)
C5': (57.319,69.993,194.984)
P: (57.425,67.619,193.860)
O2: (56.218,74.564,190.836)
C4': (56.838,71.393,194.720)
C2': (55.403,72.846,193.542)
O2': (55.314,73.905,194.474)
N1: (56.813,72.455,191.486)
N3: (56.597,73.053,189.194)
N4: (57.021,71.508,187.561)
C6: (57.119,71.170,191.131)
C5: (57.191,70.806,189.843)
O3': (54.471,71.377,195.273)
C4: (54.196,70.678,187.532)
N3: (54.070,72.028,187.308)
OP1: (52.209,70.825,196.213)
OP2: (53.414,69.235,194.589)
C2: (53.573,72.965,188.175)
C1': (52.536,73.436,190.325)
C3': (50.698,72.793,191.680)
O5': (52.436,71.386,193.780)
O4': (52.947,73.166,191.650)
C5': (52.071,72.777,193.888)
P: (53.079,70.615,195.023)
C4': (51.813,73.383,192.524)
C2': (51.005,73.399,190.315)
O2': (50.522,74.716,190.212)
N1: (53.149,72.475,189.397)
O4: (54.639,69.956,186.633)
O2: (53.513,74.140,187.880)
C6: (53.275,71.140,189.700)
C5: (53.769,70.247,188.832)
O3': (49.414,73.222,192.128)
N3: (54.070,72.028,187.308)
OP1: (52.209,70.825,196.213)
OP2: (53.414,69.235,194.589)
C2: (53.573,72.965,188.175)
C1': (52.536,73.436,190.325)
C3': (50.698,72.793,191.680)
O5': (52.436,71.386,193.780)
O4': (52.947,73.166,191.650)
C5': (52.071,72.777,193.888)
P: (53.079,70.615,195.023)
C4': (51.813,73.383,192.524)
C2': (51.005,73.399,190.315)
O2': (50.522,74.716,190.212)
N1: (53.149,72.475,189.397)
O4: (54.639,69.956,186.633)
O2: (53.513,74.140,187.880)
C6: (53.275,71.140,189.700)
C5: (53.769,70.247,188.832)
O3': (49.414,73.222,192.128)
Image (generated by PyMOL):