Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0124:0125
Extra
PDB:
ATOM 1 O3' G A 123 89.479 131.747 15.020 1.00 41.17 O
ATOM 2 P C A 124 90.686 132.301 14.123 1.00 41.06 P
ATOM 3 OP1 C A 124 91.294 131.128 13.455 1.00 40.30 O
ATOM 4 OP2 C A 124 91.532 133.193 14.947 1.00 37.90 O
ATOM 5 O5' C A 124 89.947 133.199 13.039 1.00 40.02 O
ATOM 6 C5' C A 124 88.984 132.618 12.154 1.00 41.39 C
ATOM 7 C4' C A 124 88.273 133.694 11.378 1.00 43.84 C
ATOM 8 O4' C A 124 87.549 134.551 12.293 1.00 44.06 O
ATOM 9 C3' C A 124 89.143 134.671 10.609 1.00 45.07 C
ATOM 10 O3' C A 124 89.569 134.137 9.373 1.00 49.34 O
ATOM 11 C2' C A 124 88.180 135.822 10.399 1.00 43.45 C
ATOM 12 O2' C A 124 87.226 135.518 9.408 1.00 44.40 O
ATOM 13 C1' C A 124 87.479 135.860 11.753 1.00 42.77 C
ATOM 14 N1 C A 124 88.133 136.796 12.681 1.00 42.28 N
ATOM 15 C2 C A 124 87.745 138.142 12.654 1.00 42.22 C
ATOM 16 O2 C A 124 86.853 138.498 11.860 1.00 41.90 O
ATOM 17 N3 C A 124 88.346 139.019 13.490 1.00 41.21 N
ATOM 18 C4 C A 124 89.292 138.599 14.330 1.00 40.53 C
ATOM 19 N4 C A 124 89.856 139.505 15.128 1.00 40.04 N
ATOM 20 C5 C A 124 89.702 137.234 14.387 1.00 40.75 C
ATOM 21 C6 C A 124 89.104 136.375 13.552 1.00 41.66 C
ATOM 22 P U A 125 91.051 134.447 8.836 1.00 53.42 P
ATOM 23 OP1 U A 125 91.056 133.831 7.491 1.00 53.07 O
ATOM 24 OP2 U A 125 92.075 134.034 9.835 1.00 48.34 O
ATOM 25 O5' U A 125 91.112 136.039 8.703 1.00 55.73 O
TER
ATOM 1 O3' C B 124 89.569 134.137 9.373 1.00 49.34 O
ATOM 2 P U B 125 91.051 134.447 8.836 1.00 53.42 P
ATOM 3 OP1 U B 125 91.056 133.831 7.491 1.00 53.07 O
ATOM 4 OP2 U B 125 92.075 134.034 9.835 1.00 48.34 O
ATOM 5 O5' U B 125 91.112 136.039 8.703 1.00 55.73 O
ATOM 6 C5' U B 125 90.267 136.759 7.768 1.00 59.83 C
ATOM 7 C4' U B 125 90.159 138.223 8.170 1.00 62.97 C
ATOM 8 O4' U B 125 89.796 138.276 9.576 1.00 63.74 O
ATOM 9 C3' U B 125 91.416 139.089 8.066 1.00 64.45 C
ATOM 10 O3' U B 125 91.570 139.640 6.746 1.00 69.97 O
ATOM 11 C2' U B 125 91.144 140.171 9.109 1.00 62.23 C
ATOM 12 O2' U B 125 90.223 141.146 8.665 1.00 59.05 O
ATOM 13 C1' U B 125 90.455 139.361 10.208 1.00 60.69 C
ATOM 14 N1 U B 125 91.349 138.819 11.248 1.00 57.41 N
ATOM 15 C2 U B 125 91.673 139.636 12.312 1.00 55.57 C
ATOM 16 O2 U B 125 91.280 140.778 12.408 1.00 56.66 O
ATOM 17 N3 U B 125 92.477 139.064 13.265 1.00 54.72 N
ATOM 18 C4 U B 125 92.986 137.784 13.261 1.00 55.23 C
ATOM 19 O4 U B 125 93.700 137.409 14.196 1.00 53.13 O
ATOM 20 C5 U B 125 92.620 137.004 12.119 1.00 56.52 C
ATOM 21 C6 U B 125 91.837 137.534 11.176 1.00 56.23 C
ATOM 22 P U B 126 93.032 140.072 6.196 1.00 73.56 P
ATOM 23 OP1 U B 126 92.963 139.916 4.726 1.00 73.14 O
ATOM 24 OP2 U B 126 94.078 139.335 6.954 1.00 72.91 O
ATOM 25 O5' U B 126 93.148 141.637 6.529 1.00 77.25 O
TER
ATOM 2 P C A 124 90.686 132.301 14.123 1.00 41.06 P
ATOM 3 OP1 C A 124 91.294 131.128 13.455 1.00 40.30 O
ATOM 4 OP2 C A 124 91.532 133.193 14.947 1.00 37.90 O
ATOM 5 O5' C A 124 89.947 133.199 13.039 1.00 40.02 O
ATOM 6 C5' C A 124 88.984 132.618 12.154 1.00 41.39 C
ATOM 7 C4' C A 124 88.273 133.694 11.378 1.00 43.84 C
ATOM 8 O4' C A 124 87.549 134.551 12.293 1.00 44.06 O
ATOM 9 C3' C A 124 89.143 134.671 10.609 1.00 45.07 C
ATOM 10 O3' C A 124 89.569 134.137 9.373 1.00 49.34 O
ATOM 11 C2' C A 124 88.180 135.822 10.399 1.00 43.45 C
ATOM 12 O2' C A 124 87.226 135.518 9.408 1.00 44.40 O
ATOM 13 C1' C A 124 87.479 135.860 11.753 1.00 42.77 C
ATOM 14 N1 C A 124 88.133 136.796 12.681 1.00 42.28 N
ATOM 15 C2 C A 124 87.745 138.142 12.654 1.00 42.22 C
ATOM 16 O2 C A 124 86.853 138.498 11.860 1.00 41.90 O
ATOM 17 N3 C A 124 88.346 139.019 13.490 1.00 41.21 N
ATOM 18 C4 C A 124 89.292 138.599 14.330 1.00 40.53 C
ATOM 19 N4 C A 124 89.856 139.505 15.128 1.00 40.04 N
ATOM 20 C5 C A 124 89.702 137.234 14.387 1.00 40.75 C
ATOM 21 C6 C A 124 89.104 136.375 13.552 1.00 41.66 C
ATOM 22 P U A 125 91.051 134.447 8.836 1.00 53.42 P
ATOM 23 OP1 U A 125 91.056 133.831 7.491 1.00 53.07 O
ATOM 24 OP2 U A 125 92.075 134.034 9.835 1.00 48.34 O
ATOM 25 O5' U A 125 91.112 136.039 8.703 1.00 55.73 O
TER
ATOM 1 O3' C B 124 89.569 134.137 9.373 1.00 49.34 O
ATOM 2 P U B 125 91.051 134.447 8.836 1.00 53.42 P
ATOM 3 OP1 U B 125 91.056 133.831 7.491 1.00 53.07 O
ATOM 4 OP2 U B 125 92.075 134.034 9.835 1.00 48.34 O
ATOM 5 O5' U B 125 91.112 136.039 8.703 1.00 55.73 O
ATOM 6 C5' U B 125 90.267 136.759 7.768 1.00 59.83 C
ATOM 7 C4' U B 125 90.159 138.223 8.170 1.00 62.97 C
ATOM 8 O4' U B 125 89.796 138.276 9.576 1.00 63.74 O
ATOM 9 C3' U B 125 91.416 139.089 8.066 1.00 64.45 C
ATOM 10 O3' U B 125 91.570 139.640 6.746 1.00 69.97 O
ATOM 11 C2' U B 125 91.144 140.171 9.109 1.00 62.23 C
ATOM 12 O2' U B 125 90.223 141.146 8.665 1.00 59.05 O
ATOM 13 C1' U B 125 90.455 139.361 10.208 1.00 60.69 C
ATOM 14 N1 U B 125 91.349 138.819 11.248 1.00 57.41 N
ATOM 15 C2 U B 125 91.673 139.636 12.312 1.00 55.57 C
ATOM 16 O2 U B 125 91.280 140.778 12.408 1.00 56.66 O
ATOM 17 N3 U B 125 92.477 139.064 13.265 1.00 54.72 N
ATOM 18 C4 U B 125 92.986 137.784 13.261 1.00 55.23 C
ATOM 19 O4 U B 125 93.700 137.409 14.196 1.00 53.13 O
ATOM 20 C5 U B 125 92.620 137.004 12.119 1.00 56.52 C
ATOM 21 C6 U B 125 91.837 137.534 11.176 1.00 56.23 C
ATOM 22 P U B 126 93.032 140.072 6.196 1.00 73.56 P
ATOM 23 OP1 U B 126 92.963 139.916 4.726 1.00 73.14 O
ATOM 24 OP2 U B 126 94.078 139.335 6.954 1.00 72.91 O
ATOM 25 O5' U B 126 93.148 141.637 6.529 1.00 77.25 O
TER
Atoms:
C2: (87.745,138.142,12.654)
OP1: (91.294,131.128,13.455)
OP2: (91.532,133.193,14.947)
C4: (89.292,138.599,14.330)
O5': (89.947,133.199,13.039)
C3': (89.143,134.671,10.609)
C1': (87.479,135.860,11.753)
O4': (87.549,134.551,12.293)
C5': (88.984,132.618,12.154)
P: (90.686,132.301,14.123)
O2: (86.853,138.498,11.860)
C4': (88.273,133.694,11.378)
C2': (88.180,135.822,10.399)
O2': (87.226,135.518,9.408)
N1: (88.133,136.796,12.681)
N3: (88.346,139.019,13.490)
N4: (89.856,139.505,15.128)
C6: (89.104,136.375,13.552)
C5: (89.702,137.234,14.387)
O3': (89.569,134.137,9.373)
OP1: (91.294,131.128,13.455)
OP2: (91.532,133.193,14.947)
C4: (89.292,138.599,14.330)
O5': (89.947,133.199,13.039)
C3': (89.143,134.671,10.609)
C1': (87.479,135.860,11.753)
O4': (87.549,134.551,12.293)
C5': (88.984,132.618,12.154)
P: (90.686,132.301,14.123)
O2: (86.853,138.498,11.860)
C4': (88.273,133.694,11.378)
C2': (88.180,135.822,10.399)
O2': (87.226,135.518,9.408)
N1: (88.133,136.796,12.681)
N3: (88.346,139.019,13.490)
N4: (89.856,139.505,15.128)
C6: (89.104,136.375,13.552)
C5: (89.702,137.234,14.387)
O3': (89.569,134.137,9.373)
C4: (92.986,137.784,13.261)
N3: (92.477,139.064,13.265)
OP1: (91.056,133.831,7.491)
OP2: (92.075,134.034,9.835)
C2: (91.673,139.636,12.312)
C1': (90.455,139.361,10.208)
C3': (91.416,139.089,8.066)
O5': (91.112,136.039,8.703)
O4': (89.796,138.276,9.576)
C5': (90.267,136.759,7.768)
P: (91.051,134.447,8.836)
C4': (90.159,138.223,8.170)
C2': (91.144,140.171,9.109)
O2': (90.223,141.146,8.665)
N1: (91.349,138.819,11.248)
O4: (93.700,137.409,14.196)
O2: (91.280,140.778,12.408)
C6: (91.837,137.534,11.176)
C5: (92.620,137.004,12.119)
O3': (91.570,139.640,6.746)
N3: (92.477,139.064,13.265)
OP1: (91.056,133.831,7.491)
OP2: (92.075,134.034,9.835)
C2: (91.673,139.636,12.312)
C1': (90.455,139.361,10.208)
C3': (91.416,139.089,8.066)
O5': (91.112,136.039,8.703)
O4': (89.796,138.276,9.576)
C5': (90.267,136.759,7.768)
P: (91.051,134.447,8.836)
C4': (90.159,138.223,8.170)
C2': (91.144,140.171,9.109)
O2': (90.223,141.146,8.665)
N1: (91.349,138.819,11.248)
O4: (93.700,137.409,14.196)
O2: (91.280,140.778,12.408)
C6: (91.837,137.534,11.176)
C5: (92.620,137.004,12.119)
O3': (91.570,139.640,6.746)
Image (generated by PyMOL):