Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1380:A1381
Extra
PDB:
ATOM 1 O3' C A1379 65.515 175.805 65.253 1.00 35.17 O
ATOM 2 P C A1380 64.187 176.497 65.837 1.00 35.51 P
ATOM 3 OP1 C A1380 64.571 177.268 67.051 1.00 34.32 O
ATOM 4 OP2 C A1380 63.080 175.501 65.920 1.00 36.66 O
ATOM 5 O5' C A1380 63.802 177.543 64.700 1.00 36.11 O
ATOM 6 C5' C A1380 64.661 178.662 64.399 1.00 35.65 C
ATOM 7 C4' C A1380 64.062 179.492 63.296 1.00 35.05 C
ATOM 8 O4' C A1380 64.107 178.769 62.041 1.00 34.31 O
ATOM 9 C3' C A1380 62.595 179.809 63.505 1.00 36.13 C
ATOM 10 O3' C A1380 62.422 180.912 64.383 1.00 38.66 O
ATOM 11 C2' C A1380 62.122 180.070 62.087 1.00 35.35 C
ATOM 12 O2' C A1380 62.511 181.341 61.627 1.00 34.75 O
ATOM 13 C1' C A1380 62.916 179.018 61.310 1.00 35.11 C
ATOM 14 N1 C A1380 62.206 177.731 61.100 1.00 35.96 N
ATOM 15 C2 C A1380 61.243 177.635 60.082 1.00 36.03 C
ATOM 16 O2 C A1380 60.965 178.647 59.418 1.00 36.53 O
ATOM 17 N3 C A1380 60.640 176.443 59.850 1.00 37.71 N
ATOM 18 C4 C A1380 60.961 175.375 60.595 1.00 37.99 C
ATOM 19 N4 C A1380 60.371 174.203 60.322 1.00 37.64 N
ATOM 20 C5 C A1380 61.910 175.455 61.653 1.00 37.30 C
ATOM 21 C6 C A1380 62.499 176.638 61.870 1.00 36.01 C
ATOM 22 P U A1381 61.049 181.063 65.202 1.00 40.53 P
ATOM 23 OP1 U A1381 61.113 182.300 66.042 1.00 39.26 O
ATOM 24 OP2 U A1381 60.783 179.759 65.845 1.00 40.61 O
ATOM 25 O5' U A1381 59.981 181.299 64.046 1.00 40.23 O
TER
ATOM 1 O3' C B1380 62.422 180.912 64.383 1.00 38.66 O
ATOM 2 P U B1381 61.049 181.063 65.202 1.00 40.53 P
ATOM 3 OP1 U B1381 61.113 182.300 66.042 1.00 39.26 O
ATOM 4 OP2 U B1381 60.783 179.759 65.845 1.00 40.61 O
ATOM 5 O5' U B1381 59.981 181.299 64.046 1.00 40.23 O
ATOM 6 C5' U B1381 60.064 182.465 63.207 1.00 41.05 C
ATOM 7 C4' U B1381 58.905 182.503 62.243 1.00 40.70 C
ATOM 8 O4' U B1381 59.086 181.493 61.221 1.00 40.41 O
ATOM 9 C3' U B1381 57.532 182.212 62.828 1.00 39.92 C
ATOM 10 O3' U B1381 56.976 183.366 63.450 1.00 42.03 O
ATOM 11 C2' U B1381 56.759 181.788 61.590 1.00 39.31 C
ATOM 12 O2' U B1381 56.404 182.900 60.805 1.00 38.65 O
ATOM 13 C1' U B1381 57.822 180.996 60.823 1.00 40.47 C
ATOM 14 N1 U B1381 57.796 179.546 61.074 1.00 41.98 N
ATOM 15 C2 U B1381 56.933 178.777 60.314 1.00 42.44 C
ATOM 16 O2 U B1381 56.201 179.242 59.451 1.00 44.21 O
ATOM 17 N3 U B1381 56.962 177.434 60.589 1.00 41.68 N
ATOM 18 C4 U B1381 57.752 176.789 61.510 1.00 40.15 C
ATOM 19 O4 U B1381 57.718 175.562 61.578 1.00 40.84 O
ATOM 20 C5 U B1381 58.613 177.644 62.257 1.00 40.35 C
ATOM 21 C6 U B1381 58.606 178.960 62.025 1.00 41.11 C
ATOM 22 P C B1382 55.858 183.197 64.590 1.00 45.57 P
ATOM 23 OP1 C B1382 55.595 184.543 65.157 1.00 46.64 O
ATOM 24 OP2 C B1382 56.271 182.095 65.492 1.00 47.34 O
ATOM 25 O5' C B1382 54.557 182.723 63.801 1.00 44.57 O
TER
ATOM 2 P C A1380 64.187 176.497 65.837 1.00 35.51 P
ATOM 3 OP1 C A1380 64.571 177.268 67.051 1.00 34.32 O
ATOM 4 OP2 C A1380 63.080 175.501 65.920 1.00 36.66 O
ATOM 5 O5' C A1380 63.802 177.543 64.700 1.00 36.11 O
ATOM 6 C5' C A1380 64.661 178.662 64.399 1.00 35.65 C
ATOM 7 C4' C A1380 64.062 179.492 63.296 1.00 35.05 C
ATOM 8 O4' C A1380 64.107 178.769 62.041 1.00 34.31 O
ATOM 9 C3' C A1380 62.595 179.809 63.505 1.00 36.13 C
ATOM 10 O3' C A1380 62.422 180.912 64.383 1.00 38.66 O
ATOM 11 C2' C A1380 62.122 180.070 62.087 1.00 35.35 C
ATOM 12 O2' C A1380 62.511 181.341 61.627 1.00 34.75 O
ATOM 13 C1' C A1380 62.916 179.018 61.310 1.00 35.11 C
ATOM 14 N1 C A1380 62.206 177.731 61.100 1.00 35.96 N
ATOM 15 C2 C A1380 61.243 177.635 60.082 1.00 36.03 C
ATOM 16 O2 C A1380 60.965 178.647 59.418 1.00 36.53 O
ATOM 17 N3 C A1380 60.640 176.443 59.850 1.00 37.71 N
ATOM 18 C4 C A1380 60.961 175.375 60.595 1.00 37.99 C
ATOM 19 N4 C A1380 60.371 174.203 60.322 1.00 37.64 N
ATOM 20 C5 C A1380 61.910 175.455 61.653 1.00 37.30 C
ATOM 21 C6 C A1380 62.499 176.638 61.870 1.00 36.01 C
ATOM 22 P U A1381 61.049 181.063 65.202 1.00 40.53 P
ATOM 23 OP1 U A1381 61.113 182.300 66.042 1.00 39.26 O
ATOM 24 OP2 U A1381 60.783 179.759 65.845 1.00 40.61 O
ATOM 25 O5' U A1381 59.981 181.299 64.046 1.00 40.23 O
TER
ATOM 1 O3' C B1380 62.422 180.912 64.383 1.00 38.66 O
ATOM 2 P U B1381 61.049 181.063 65.202 1.00 40.53 P
ATOM 3 OP1 U B1381 61.113 182.300 66.042 1.00 39.26 O
ATOM 4 OP2 U B1381 60.783 179.759 65.845 1.00 40.61 O
ATOM 5 O5' U B1381 59.981 181.299 64.046 1.00 40.23 O
ATOM 6 C5' U B1381 60.064 182.465 63.207 1.00 41.05 C
ATOM 7 C4' U B1381 58.905 182.503 62.243 1.00 40.70 C
ATOM 8 O4' U B1381 59.086 181.493 61.221 1.00 40.41 O
ATOM 9 C3' U B1381 57.532 182.212 62.828 1.00 39.92 C
ATOM 10 O3' U B1381 56.976 183.366 63.450 1.00 42.03 O
ATOM 11 C2' U B1381 56.759 181.788 61.590 1.00 39.31 C
ATOM 12 O2' U B1381 56.404 182.900 60.805 1.00 38.65 O
ATOM 13 C1' U B1381 57.822 180.996 60.823 1.00 40.47 C
ATOM 14 N1 U B1381 57.796 179.546 61.074 1.00 41.98 N
ATOM 15 C2 U B1381 56.933 178.777 60.314 1.00 42.44 C
ATOM 16 O2 U B1381 56.201 179.242 59.451 1.00 44.21 O
ATOM 17 N3 U B1381 56.962 177.434 60.589 1.00 41.68 N
ATOM 18 C4 U B1381 57.752 176.789 61.510 1.00 40.15 C
ATOM 19 O4 U B1381 57.718 175.562 61.578 1.00 40.84 O
ATOM 20 C5 U B1381 58.613 177.644 62.257 1.00 40.35 C
ATOM 21 C6 U B1381 58.606 178.960 62.025 1.00 41.11 C
ATOM 22 P C B1382 55.858 183.197 64.590 1.00 45.57 P
ATOM 23 OP1 C B1382 55.595 184.543 65.157 1.00 46.64 O
ATOM 24 OP2 C B1382 56.271 182.095 65.492 1.00 47.34 O
ATOM 25 O5' C B1382 54.557 182.723 63.801 1.00 44.57 O
TER
Atoms:
C2: (61.243,177.635,60.082)
OP1: (64.571,177.268,67.051)
OP2: (63.080,175.501,65.920)
C4: (60.961,175.375,60.595)
O5': (63.802,177.543,64.700)
C3': (62.595,179.809,63.505)
C1': (62.916,179.018,61.310)
O4': (64.107,178.769,62.041)
C5': (64.661,178.662,64.399)
P: (64.187,176.497,65.837)
O2: (60.965,178.647,59.418)
C4': (64.062,179.492,63.296)
C2': (62.122,180.070,62.087)
O2': (62.511,181.341,61.627)
N1: (62.206,177.731,61.100)
N3: (60.640,176.443,59.850)
N4: (60.371,174.203,60.322)
C6: (62.499,176.638,61.870)
C5: (61.910,175.455,61.653)
O3': (62.422,180.912,64.383)
OP1: (64.571,177.268,67.051)
OP2: (63.080,175.501,65.920)
C4: (60.961,175.375,60.595)
O5': (63.802,177.543,64.700)
C3': (62.595,179.809,63.505)
C1': (62.916,179.018,61.310)
O4': (64.107,178.769,62.041)
C5': (64.661,178.662,64.399)
P: (64.187,176.497,65.837)
O2: (60.965,178.647,59.418)
C4': (64.062,179.492,63.296)
C2': (62.122,180.070,62.087)
O2': (62.511,181.341,61.627)
N1: (62.206,177.731,61.100)
N3: (60.640,176.443,59.850)
N4: (60.371,174.203,60.322)
C6: (62.499,176.638,61.870)
C5: (61.910,175.455,61.653)
O3': (62.422,180.912,64.383)
C4: (57.752,176.789,61.510)
N3: (56.962,177.434,60.589)
OP1: (61.113,182.300,66.042)
OP2: (60.783,179.759,65.845)
C2: (56.933,178.777,60.314)
C1': (57.822,180.996,60.823)
C3': (57.532,182.212,62.828)
O5': (59.981,181.299,64.046)
O4': (59.086,181.493,61.221)
C5': (60.064,182.465,63.207)
P: (61.049,181.063,65.202)
C4': (58.905,182.503,62.243)
C2': (56.759,181.788,61.590)
O2': (56.404,182.900,60.805)
N1: (57.796,179.546,61.074)
O4: (57.718,175.562,61.578)
O2: (56.201,179.242,59.451)
C6: (58.606,178.960,62.025)
C5: (58.613,177.644,62.257)
O3': (56.976,183.366,63.450)
N3: (56.962,177.434,60.589)
OP1: (61.113,182.300,66.042)
OP2: (60.783,179.759,65.845)
C2: (56.933,178.777,60.314)
C1': (57.822,180.996,60.823)
C3': (57.532,182.212,62.828)
O5': (59.981,181.299,64.046)
O4': (59.086,181.493,61.221)
C5': (60.064,182.465,63.207)
P: (61.049,181.063,65.202)
C4': (58.905,182.503,62.243)
C2': (56.759,181.788,61.590)
O2': (56.404,182.900,60.805)
N1: (57.796,179.546,61.074)
O4: (57.718,175.562,61.578)
O2: (56.201,179.242,59.451)
C6: (58.606,178.960,62.025)
C5: (58.613,177.644,62.257)
O3': (56.976,183.366,63.450)
Image (generated by PyMOL):