ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:6619:61098

Extra

PDB:
ATOM 1 O3' A A 618 240.352 17.369 219.741 1.00 49.04 O
ATOM 2 P A A 619 238.870 16.832 219.532 1.00 56.60 P
ATOM 3 OP1 A A 619 238.352 16.361 220.836 1.00 56.37 O
ATOM 4 OP2 A A 619 238.916 15.900 218.403 1.00 56.88 O
ATOM 5 O5' A A 619 238.125 18.145 219.100 1.00 56.33 O
ATOM 6 C5' A A 619 237.296 18.856 219.988 1.00 55.95 C
ATOM 7 C4' A A 619 236.016 19.158 219.296 1.00 55.73 C
ATOM 8 O4' A A 619 235.882 20.582 219.073 1.00 55.61 O
ATOM 9 C3' A A 619 235.930 18.533 217.923 1.00 55.96 C
ATOM 10 O3' A A 619 234.595 18.201 217.696 1.00 55.75 O
ATOM 11 C2' A A 619 236.355 19.670 217.005 1.00 56.11 C
ATOM 12 O2' A A 619 235.959 19.531 215.660 1.00 56.28 O
ATOM 13 C1' A A 619 235.646 20.802 217.689 1.00 55.76 C
ATOM 14 N9 A A 619 236.112 22.133 217.330 1.00 55.83 N
ATOM 15 C8 A A 619 235.389 23.097 216.699 1.00 55.74 C
ATOM 16 N7 A A 619 236.042 24.204 216.544 1.00 55.86 N
ATOM 17 C5 A A 619 237.275 23.916 217.130 1.00 56.04 C
ATOM 18 C6 A A 619 238.446 24.682 217.317 1.00 56.26 C
ATOM 19 N6 A A 619 238.559 25.942 216.883 1.00 56.33 N
ATOM 20 N1 A A 619 239.492 24.118 217.965 1.00 56.42 N
ATOM 21 C2 A A 619 239.361 22.853 218.393 1.00 56.38 C
ATOM 22 N3 A A 619 238.321 22.023 218.275 1.00 56.19 N
ATOM 23 C4 A A 619 237.318 22.641 217.629 1.00 56.02 C
ATOM 24 P G A 620 234.202 16.681 217.634 1.00 48.20 P
ATOM 25 OP1 G A 620 232.760 16.633 217.297 1.00 47.99 O
ATOM 26 OP2 G A 620 234.670 16.034 218.879 1.00 48.19 O
ATOM 27 O5' G A 620 235.067 16.184 216.415 1.00 48.63 O
TER

ATOM 1 O3' U B1097 245.174 33.514 217.149 1.00 45.56 O
ATOM 2 P U B1098 244.302 33.386 218.508 1.00 51.06 P
ATOM 3 OP1 U B1098 243.484 34.605 218.582 1.00 50.87 O
ATOM 4 OP2 U B1098 245.216 33.100 219.607 1.00 51.14 O
ATOM 5 O5' U B1098 243.370 32.106 218.242 1.00 50.78 O
ATOM 6 C5' U B1098 242.634 31.978 217.033 1.00 50.79 C
ATOM 7 C4' U B1098 241.974 30.628 216.911 1.00 50.58 C
ATOM 8 O4' U B1098 242.944 29.617 216.522 1.00 50.92 O
ATOM 9 C3' U B1098 241.378 30.069 218.174 1.00 50.17 C
ATOM 10 O3' U B1098 240.137 30.633 218.484 1.00 49.80 O
ATOM 11 C2' U B1098 241.297 28.588 217.853 1.00 50.18 C
ATOM 12 O2' U B1098 240.225 28.337 216.970 1.00 50.06 O
ATOM 13 C1' U B1098 242.600 28.375 217.098 1.00 50.69 C
ATOM 14 N1 U B1098 243.673 27.947 218.017 1.00 50.84 N
ATOM 15 C2 U B1098 243.642 26.639 218.353 1.00 50.79 C
ATOM 16 O2 U B1098 242.847 25.881 217.873 1.00 50.65 O
ATOM 17 N3 U B1098 244.596 26.220 219.225 1.00 50.95 N
ATOM 18 C4 U B1098 245.560 26.993 219.833 1.00 51.14 C
ATOM 19 O4 U B1098 246.338 26.471 220.619 1.00 51.29 O
ATOM 20 C5 U B1098 245.518 28.358 219.454 1.00 51.17 C
ATOM 21 C6 U B1098 244.590 28.773 218.591 1.00 51.02 C
ATOM 22 P C B1099 239.660 30.728 219.997 1.00 44.63 P
ATOM 23 OP1 C B1099 238.373 31.402 219.965 1.00 44.35 O
ATOM 24 OP2 C B1099 240.746 31.343 220.775 1.00 44.81 O
ATOM 25 O5' C B1099 239.476 29.202 220.439 1.00 44.50 O
TER

Atoms:
OP1: (238.352,16.361,220.836)
OP2: (238.916,15.900,218.403)
C3': (235.930,18.533,217.923)
C1': (235.646,20.802,217.689)
C5': (237.296,18.856,219.988)
O4': (235.882,20.582,219.073)
C8: (235.389,23.097,216.699)
O2': (235.959,19.531,215.660)
C6: (238.446,24.682,217.317)
C5: (237.275,23.916,217.130)
C4: (237.318,22.641,217.629)
P: (238.870,16.832,219.532)
C4': (236.016,19.158,219.296)
C2': (236.355,19.670,217.005)
C2: (239.361,22.853,218.393)
N1: (239.492,24.118,217.965)
N3: (238.321,22.023,218.275)
N6: (238.559,25.942,216.883)
N7: (236.042,24.204,216.544)
N9: (236.112,22.133,217.330)
O5': (238.125,18.145,219.100)
O3': (234.595,18.201,217.696)
C4: (245.560,26.993,219.833)
N3: (244.596,26.220,219.225)
OP1: (243.484,34.605,218.582)
OP2: (245.216,33.100,219.607)
C2: (243.642,26.639,218.353)
C1': (242.600,28.375,217.098)
C3': (241.378,30.069,218.174)
O5': (243.370,32.106,218.242)
O4': (242.944,29.617,216.522)
C5': (242.634,31.978,217.033)
P: (244.302,33.386,218.508)
C4': (241.974,30.628,216.911)
C2': (241.297,28.588,217.853)
O2': (240.225,28.337,216.970)
N1: (243.673,27.947,218.017)
O4: (246.338,26.471,220.619)
O2: (242.847,25.881,217.873)
C6: (244.590,28.773,218.591)
C5: (245.518,28.358,219.454)
O3': (240.137,30.633,218.484)
Image (generated by PyMOL):
PyMOL image
show in jmol