Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0264:0265
Extra
PDB:
ATOM 1 O3' G A 263 86.082 104.011 -5.764 1.00 65.82 O
ATOM 2 P C A 264 85.896 103.739 -7.339 1.00 65.97 P
ATOM 3 OP1 C A 264 86.139 105.027 -8.044 1.00 66.45 O
ATOM 4 OP2 C A 264 84.609 103.025 -7.542 1.00 64.89 O
ATOM 5 O5' C A 264 87.096 102.754 -7.690 1.00 64.94 O
ATOM 6 C5' C A 264 88.466 103.194 -7.588 1.00 66.14 C
ATOM 7 C4' C A 264 89.405 102.064 -7.940 1.00 68.75 C
ATOM 8 O4' C A 264 89.325 101.030 -6.922 1.00 67.94 O
ATOM 9 C3' C A 264 89.092 101.343 -9.244 1.00 70.37 C
ATOM 10 O3' C A 264 89.600 102.035 -10.386 1.00 75.75 O
ATOM 11 C2' C A 264 89.720 99.974 -9.014 1.00 68.75 C
ATOM 12 O2' C A 264 91.126 99.963 -9.184 1.00 66.82 O
ATOM 13 C1' C A 264 89.389 99.749 -7.535 1.00 67.28 C
ATOM 14 N1 C A 264 88.093 99.068 -7.315 1.00 63.92 N
ATOM 15 C2 C A 264 88.056 97.663 -7.243 1.00 62.54 C
ATOM 16 O2 C A 264 89.110 97.016 -7.390 1.00 60.40 O
ATOM 17 N3 C A 264 86.870 97.050 -7.018 1.00 62.65 N
ATOM 18 C4 C A 264 85.756 97.777 -6.869 1.00 62.79 C
ATOM 19 N4 C A 264 84.609 97.132 -6.629 1.00 62.38 N
ATOM 20 C5 C A 264 85.766 99.197 -6.954 1.00 62.01 C
ATOM 21 C6 C A 264 86.940 99.794 -7.175 1.00 62.86 C
ATOM 22 P U A 265 88.771 102.011 -11.770 1.00 79.85 P
ATOM 23 OP1 U A 265 89.468 102.934 -12.706 1.00 79.86 O
ATOM 24 OP2 U A 265 87.325 102.224 -11.487 1.00 78.51 O
ATOM 25 O5' U A 265 88.966 100.513 -12.287 1.00 80.35 O
TER
ATOM 1 O3' C B 264 89.600 102.035 -10.386 1.00 75.75 O
ATOM 2 P U B 265 88.771 102.011 -11.770 1.00 79.85 P
ATOM 3 OP1 U B 265 89.468 102.934 -12.706 1.00 79.86 O
ATOM 4 OP2 U B 265 87.325 102.224 -11.487 1.00 78.51 O
ATOM 5 O5' U B 265 88.966 100.513 -12.287 1.00 80.35 O
ATOM 6 C5' U B 265 90.263 100.039 -12.723 1.00 82.52 C
ATOM 7 C4' U B 265 90.172 98.607 -13.207 1.00 84.59 C
ATOM 8 O4' U B 265 89.964 97.711 -12.079 1.00 84.96 O
ATOM 9 C3' U B 265 89.004 98.299 -14.132 1.00 86.03 C
ATOM 10 O3' U B 265 89.202 98.713 -15.478 1.00 87.66 O
ATOM 11 C2' U B 265 88.855 96.792 -13.971 1.00 85.40 C
ATOM 12 O2' U B 265 89.797 96.045 -14.714 1.00 85.16 O
ATOM 13 C1' U B 265 89.121 96.632 -12.472 1.00 84.75 C
ATOM 14 N1 U B 265 87.871 96.698 -11.694 1.00 83.84 N
ATOM 15 C2 U B 265 87.287 95.502 -11.297 1.00 82.99 C
ATOM 16 O2 U B 265 87.769 94.410 -11.545 1.00 83.05 O
ATOM 17 N3 U B 265 86.112 95.636 -10.598 1.00 82.72 N
ATOM 18 C4 U B 265 85.470 96.813 -10.262 1.00 82.31 C
ATOM 19 O4 U B 265 84.398 96.765 -9.656 1.00 80.92 O
ATOM 20 C5 U B 265 86.135 98.002 -10.698 1.00 82.30 C
ATOM 21 C6 U B 265 87.282 97.909 -11.378 1.00 83.18 C
ATOM 22 P A B 266 87.922 98.926 -16.429 1.00 90.79 P
ATOM 23 OP1 A B 266 88.424 99.260 -17.787 1.00 90.95 O
ATOM 24 OP2 A B 266 86.956 99.837 -15.762 1.00 89.64 O
ATOM 25 O5' A B 266 87.249 97.483 -16.473 1.00 92.50 O
TER
ATOM 2 P C A 264 85.896 103.739 -7.339 1.00 65.97 P
ATOM 3 OP1 C A 264 86.139 105.027 -8.044 1.00 66.45 O
ATOM 4 OP2 C A 264 84.609 103.025 -7.542 1.00 64.89 O
ATOM 5 O5' C A 264 87.096 102.754 -7.690 1.00 64.94 O
ATOM 6 C5' C A 264 88.466 103.194 -7.588 1.00 66.14 C
ATOM 7 C4' C A 264 89.405 102.064 -7.940 1.00 68.75 C
ATOM 8 O4' C A 264 89.325 101.030 -6.922 1.00 67.94 O
ATOM 9 C3' C A 264 89.092 101.343 -9.244 1.00 70.37 C
ATOM 10 O3' C A 264 89.600 102.035 -10.386 1.00 75.75 O
ATOM 11 C2' C A 264 89.720 99.974 -9.014 1.00 68.75 C
ATOM 12 O2' C A 264 91.126 99.963 -9.184 1.00 66.82 O
ATOM 13 C1' C A 264 89.389 99.749 -7.535 1.00 67.28 C
ATOM 14 N1 C A 264 88.093 99.068 -7.315 1.00 63.92 N
ATOM 15 C2 C A 264 88.056 97.663 -7.243 1.00 62.54 C
ATOM 16 O2 C A 264 89.110 97.016 -7.390 1.00 60.40 O
ATOM 17 N3 C A 264 86.870 97.050 -7.018 1.00 62.65 N
ATOM 18 C4 C A 264 85.756 97.777 -6.869 1.00 62.79 C
ATOM 19 N4 C A 264 84.609 97.132 -6.629 1.00 62.38 N
ATOM 20 C5 C A 264 85.766 99.197 -6.954 1.00 62.01 C
ATOM 21 C6 C A 264 86.940 99.794 -7.175 1.00 62.86 C
ATOM 22 P U A 265 88.771 102.011 -11.770 1.00 79.85 P
ATOM 23 OP1 U A 265 89.468 102.934 -12.706 1.00 79.86 O
ATOM 24 OP2 U A 265 87.325 102.224 -11.487 1.00 78.51 O
ATOM 25 O5' U A 265 88.966 100.513 -12.287 1.00 80.35 O
TER
ATOM 1 O3' C B 264 89.600 102.035 -10.386 1.00 75.75 O
ATOM 2 P U B 265 88.771 102.011 -11.770 1.00 79.85 P
ATOM 3 OP1 U B 265 89.468 102.934 -12.706 1.00 79.86 O
ATOM 4 OP2 U B 265 87.325 102.224 -11.487 1.00 78.51 O
ATOM 5 O5' U B 265 88.966 100.513 -12.287 1.00 80.35 O
ATOM 6 C5' U B 265 90.263 100.039 -12.723 1.00 82.52 C
ATOM 7 C4' U B 265 90.172 98.607 -13.207 1.00 84.59 C
ATOM 8 O4' U B 265 89.964 97.711 -12.079 1.00 84.96 O
ATOM 9 C3' U B 265 89.004 98.299 -14.132 1.00 86.03 C
ATOM 10 O3' U B 265 89.202 98.713 -15.478 1.00 87.66 O
ATOM 11 C2' U B 265 88.855 96.792 -13.971 1.00 85.40 C
ATOM 12 O2' U B 265 89.797 96.045 -14.714 1.00 85.16 O
ATOM 13 C1' U B 265 89.121 96.632 -12.472 1.00 84.75 C
ATOM 14 N1 U B 265 87.871 96.698 -11.694 1.00 83.84 N
ATOM 15 C2 U B 265 87.287 95.502 -11.297 1.00 82.99 C
ATOM 16 O2 U B 265 87.769 94.410 -11.545 1.00 83.05 O
ATOM 17 N3 U B 265 86.112 95.636 -10.598 1.00 82.72 N
ATOM 18 C4 U B 265 85.470 96.813 -10.262 1.00 82.31 C
ATOM 19 O4 U B 265 84.398 96.765 -9.656 1.00 80.92 O
ATOM 20 C5 U B 265 86.135 98.002 -10.698 1.00 82.30 C
ATOM 21 C6 U B 265 87.282 97.909 -11.378 1.00 83.18 C
ATOM 22 P A B 266 87.922 98.926 -16.429 1.00 90.79 P
ATOM 23 OP1 A B 266 88.424 99.260 -17.787 1.00 90.95 O
ATOM 24 OP2 A B 266 86.956 99.837 -15.762 1.00 89.64 O
ATOM 25 O5' A B 266 87.249 97.483 -16.473 1.00 92.50 O
TER
Atoms:
C2: (88.056,97.663,-7.243)
OP1: (86.139,105.027,-8.044)
OP2: (84.609,103.025,-7.542)
C4: (85.756,97.777,-6.869)
O5': (87.096,102.754,-7.690)
C3': (89.092,101.343,-9.244)
C1': (89.389,99.749,-7.535)
O4': (89.325,101.030,-6.922)
C5': (88.466,103.194,-7.588)
P: (85.896,103.739,-7.339)
O2: (89.110,97.016,-7.390)
C4': (89.405,102.064,-7.940)
C2': (89.720,99.974,-9.014)
O2': (91.126,99.963,-9.184)
N1: (88.093,99.068,-7.315)
N3: (86.870,97.050,-7.018)
N4: (84.609,97.132,-6.629)
C6: (86.940,99.794,-7.175)
C5: (85.766,99.197,-6.954)
O3': (89.600,102.035,-10.386)
OP1: (86.139,105.027,-8.044)
OP2: (84.609,103.025,-7.542)
C4: (85.756,97.777,-6.869)
O5': (87.096,102.754,-7.690)
C3': (89.092,101.343,-9.244)
C1': (89.389,99.749,-7.535)
O4': (89.325,101.030,-6.922)
C5': (88.466,103.194,-7.588)
P: (85.896,103.739,-7.339)
O2: (89.110,97.016,-7.390)
C4': (89.405,102.064,-7.940)
C2': (89.720,99.974,-9.014)
O2': (91.126,99.963,-9.184)
N1: (88.093,99.068,-7.315)
N3: (86.870,97.050,-7.018)
N4: (84.609,97.132,-6.629)
C6: (86.940,99.794,-7.175)
C5: (85.766,99.197,-6.954)
O3': (89.600,102.035,-10.386)
C4: (85.470,96.813,-10.262)
N3: (86.112,95.636,-10.598)
OP1: (89.468,102.934,-12.706)
OP2: (87.325,102.224,-11.487)
C2: (87.287,95.502,-11.297)
C1': (89.121,96.632,-12.472)
C3': (89.004,98.299,-14.132)
O5': (88.966,100.513,-12.287)
O4': (89.964,97.711,-12.079)
C5': (90.263,100.039,-12.723)
P: (88.771,102.011,-11.770)
C4': (90.172,98.607,-13.207)
C2': (88.855,96.792,-13.971)
O2': (89.797,96.045,-14.714)
N1: (87.871,96.698,-11.694)
O4: (84.398,96.765,-9.656)
O2: (87.769,94.410,-11.545)
C6: (87.282,97.909,-11.378)
C5: (86.135,98.002,-10.698)
O3': (89.202,98.713,-15.478)
N3: (86.112,95.636,-10.598)
OP1: (89.468,102.934,-12.706)
OP2: (87.325,102.224,-11.487)
C2: (87.287,95.502,-11.297)
C1': (89.121,96.632,-12.472)
C3': (89.004,98.299,-14.132)
O5': (88.966,100.513,-12.287)
O4': (89.964,97.711,-12.079)
C5': (90.263,100.039,-12.723)
P: (88.771,102.011,-11.770)
C4': (90.172,98.607,-13.207)
C2': (88.855,96.792,-13.971)
O2': (89.797,96.045,-14.714)
N1: (87.871,96.698,-11.694)
O4: (84.398,96.765,-9.656)
O2: (87.769,94.410,-11.545)
C6: (87.282,97.909,-11.378)
C5: (86.135,98.002,-10.698)
O3': (89.202,98.713,-15.478)
Image (generated by PyMOL):