Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X2:X3
Extra
PDB:
ATOM 1 O3' G A 1 6.950 -4.864 -5.448 1.00 71.50 O
ATOM 2 P C A 2 8.350 -5.335 -4.807 1.00 72.74 P
ATOM 3 OP1 C A 2 9.075 -6.134 -5.826 1.00 72.99 O
ATOM 4 OP2 C A 2 8.104 -5.927 -3.463 1.00 71.54 O
ATOM 5 O5' C A 2 9.148 -3.965 -4.645 1.00 71.44 O
ATOM 6 C5' C A 2 9.607 -3.287 -5.798 1.00 72.15 C
ATOM 7 C4' C A 2 10.008 -1.881 -5.420 1.00 72.05 C
ATOM 8 O4' C A 2 8.936 -1.262 -4.663 1.00 71.85 O
ATOM 9 C3' C A 2 11.201 -1.813 -4.485 1.00 72.39 C
ATOM 10 O3' C A 2 12.425 -1.929 -5.203 1.00 73.14 O
ATOM 11 C2' C A 2 11.003 -0.445 -3.844 1.00 71.55 C
ATOM 12 O2' C A 2 11.432 0.620 -4.675 1.00 72.74 O
ATOM 13 C1' C A 2 9.484 -0.411 -3.666 1.00 70.73 C
ATOM 14 N1 C A 2 9.020 -0.813 -2.275 1.00 69.69 N
ATOM 15 C2 C A 2 9.083 0.128 -1.229 1.00 69.09 C
ATOM 16 O2 C A 2 9.509 1.272 -1.440 1.00 68.98 O
ATOM 17 N3 C A 2 8.670 -0.243 0.008 1.00 68.98 N
ATOM 18 C4 C A 2 8.208 -1.476 0.231 1.00 68.98 C
ATOM 19 N4 C A 2 7.818 -1.762 1.475 1.00 68.96 N
ATOM 20 C5 C A 2 8.133 -2.454 -0.809 1.00 68.53 C
ATOM 21 C6 C A 2 8.544 -2.079 -2.030 1.00 68.65 C
ATOM 22 P U A 3 13.689 -2.627 -4.499 1.00 74.59 P
ATOM 23 OP1 U A 3 14.766 -2.729 -5.513 1.00 74.47 O
ATOM 24 OP2 U A 3 13.236 -3.842 -3.770 1.00 74.55 O
ATOM 25 O5' U A 3 14.145 -1.537 -3.427 1.00 74.45 O
TER
ATOM 1 O3' C B 2 12.425 -1.929 -5.203 1.00 73.14 O
ATOM 2 P U B 3 13.689 -2.627 -4.499 1.00 74.59 P
ATOM 3 OP1 U B 3 14.766 -2.729 -5.513 1.00 74.47 O
ATOM 4 OP2 U B 3 13.236 -3.842 -3.770 1.00 74.55 O
ATOM 5 O5' U B 3 14.145 -1.537 -3.427 1.00 74.45 O
ATOM 6 C5' U B 3 14.521 -0.225 -3.835 1.00 75.00 C
ATOM 7 C4' U B 3 14.735 0.625 -2.603 1.00 75.25 C
ATOM 8 O4' U B 3 13.467 0.872 -1.942 1.00 74.91 O
ATOM 9 C3' U B 3 15.582 -0.066 -1.547 1.00 75.30 C
ATOM 10 O3' U B 3 16.957 0.131 -1.809 1.00 75.64 O
ATOM 11 C2' U B 3 15.157 0.656 -0.280 1.00 75.25 C
ATOM 12 O2' U B 3 15.928 1.812 -0.019 1.00 76.10 O
ATOM 13 C1' U B 3 13.686 0.990 -0.546 1.00 74.64 C
ATOM 14 N1 U B 3 12.822 0.045 0.231 1.00 74.04 N
ATOM 15 C2 U B 3 12.631 0.295 1.582 1.00 74.11 C
ATOM 16 O2 U B 3 13.114 1.253 2.165 1.00 73.85 O
ATOM 17 N3 U B 3 11.844 -0.625 2.234 1.00 74.13 N
ATOM 18 C4 U B 3 11.249 -1.749 1.685 1.00 74.09 C
ATOM 19 O4 U B 3 10.568 -2.475 2.401 1.00 74.15 O
ATOM 20 C5 U B 3 11.499 -1.950 0.278 1.00 73.63 C
ATOM 21 C6 U B 3 12.260 -1.065 -0.382 1.00 73.60 C
ATOM 22 P U B 4 18.036 -0.966 -1.367 1.00 76.71 P
ATOM 23 OP1 U B 4 19.348 -0.333 -1.639 1.00 77.08 O
ATOM 24 OP2 U B 4 17.700 -2.271 -1.993 1.00 76.68 O
ATOM 25 O5' U B 4 17.833 -1.113 0.217 1.00 75.01 O
TER
ATOM 2 P C A 2 8.350 -5.335 -4.807 1.00 72.74 P
ATOM 3 OP1 C A 2 9.075 -6.134 -5.826 1.00 72.99 O
ATOM 4 OP2 C A 2 8.104 -5.927 -3.463 1.00 71.54 O
ATOM 5 O5' C A 2 9.148 -3.965 -4.645 1.00 71.44 O
ATOM 6 C5' C A 2 9.607 -3.287 -5.798 1.00 72.15 C
ATOM 7 C4' C A 2 10.008 -1.881 -5.420 1.00 72.05 C
ATOM 8 O4' C A 2 8.936 -1.262 -4.663 1.00 71.85 O
ATOM 9 C3' C A 2 11.201 -1.813 -4.485 1.00 72.39 C
ATOM 10 O3' C A 2 12.425 -1.929 -5.203 1.00 73.14 O
ATOM 11 C2' C A 2 11.003 -0.445 -3.844 1.00 71.55 C
ATOM 12 O2' C A 2 11.432 0.620 -4.675 1.00 72.74 O
ATOM 13 C1' C A 2 9.484 -0.411 -3.666 1.00 70.73 C
ATOM 14 N1 C A 2 9.020 -0.813 -2.275 1.00 69.69 N
ATOM 15 C2 C A 2 9.083 0.128 -1.229 1.00 69.09 C
ATOM 16 O2 C A 2 9.509 1.272 -1.440 1.00 68.98 O
ATOM 17 N3 C A 2 8.670 -0.243 0.008 1.00 68.98 N
ATOM 18 C4 C A 2 8.208 -1.476 0.231 1.00 68.98 C
ATOM 19 N4 C A 2 7.818 -1.762 1.475 1.00 68.96 N
ATOM 20 C5 C A 2 8.133 -2.454 -0.809 1.00 68.53 C
ATOM 21 C6 C A 2 8.544 -2.079 -2.030 1.00 68.65 C
ATOM 22 P U A 3 13.689 -2.627 -4.499 1.00 74.59 P
ATOM 23 OP1 U A 3 14.766 -2.729 -5.513 1.00 74.47 O
ATOM 24 OP2 U A 3 13.236 -3.842 -3.770 1.00 74.55 O
ATOM 25 O5' U A 3 14.145 -1.537 -3.427 1.00 74.45 O
TER
ATOM 1 O3' C B 2 12.425 -1.929 -5.203 1.00 73.14 O
ATOM 2 P U B 3 13.689 -2.627 -4.499 1.00 74.59 P
ATOM 3 OP1 U B 3 14.766 -2.729 -5.513 1.00 74.47 O
ATOM 4 OP2 U B 3 13.236 -3.842 -3.770 1.00 74.55 O
ATOM 5 O5' U B 3 14.145 -1.537 -3.427 1.00 74.45 O
ATOM 6 C5' U B 3 14.521 -0.225 -3.835 1.00 75.00 C
ATOM 7 C4' U B 3 14.735 0.625 -2.603 1.00 75.25 C
ATOM 8 O4' U B 3 13.467 0.872 -1.942 1.00 74.91 O
ATOM 9 C3' U B 3 15.582 -0.066 -1.547 1.00 75.30 C
ATOM 10 O3' U B 3 16.957 0.131 -1.809 1.00 75.64 O
ATOM 11 C2' U B 3 15.157 0.656 -0.280 1.00 75.25 C
ATOM 12 O2' U B 3 15.928 1.812 -0.019 1.00 76.10 O
ATOM 13 C1' U B 3 13.686 0.990 -0.546 1.00 74.64 C
ATOM 14 N1 U B 3 12.822 0.045 0.231 1.00 74.04 N
ATOM 15 C2 U B 3 12.631 0.295 1.582 1.00 74.11 C
ATOM 16 O2 U B 3 13.114 1.253 2.165 1.00 73.85 O
ATOM 17 N3 U B 3 11.844 -0.625 2.234 1.00 74.13 N
ATOM 18 C4 U B 3 11.249 -1.749 1.685 1.00 74.09 C
ATOM 19 O4 U B 3 10.568 -2.475 2.401 1.00 74.15 O
ATOM 20 C5 U B 3 11.499 -1.950 0.278 1.00 73.63 C
ATOM 21 C6 U B 3 12.260 -1.065 -0.382 1.00 73.60 C
ATOM 22 P U B 4 18.036 -0.966 -1.367 1.00 76.71 P
ATOM 23 OP1 U B 4 19.348 -0.333 -1.639 1.00 77.08 O
ATOM 24 OP2 U B 4 17.700 -2.271 -1.993 1.00 76.68 O
ATOM 25 O5' U B 4 17.833 -1.113 0.217 1.00 75.01 O
TER
Atoms:
C2: (9.083,0.128,-1.229)
OP1: (9.075,-6.134,-5.826)
OP2: (8.104,-5.927,-3.463)
C4: (8.208,-1.476,0.231)
O5': (9.148,-3.965,-4.645)
C3': (11.201,-1.813,-4.485)
C1': (9.484,-0.411,-3.666)
O4': (8.936,-1.262,-4.663)
C5': (9.607,-3.287,-5.798)
P: (8.350,-5.335,-4.807)
O2: (9.509,1.272,-1.440)
C4': (10.008,-1.881,-5.420)
C2': (11.003,-0.445,-3.844)
O2': (11.432,0.620,-4.675)
N1: (9.020,-0.813,-2.275)
N3: (8.670,-0.243,0.008)
N4: (7.818,-1.762,1.475)
C6: (8.544,-2.079,-2.030)
C5: (8.133,-2.454,-0.809)
O3': (12.425,-1.929,-5.203)
OP1: (9.075,-6.134,-5.826)
OP2: (8.104,-5.927,-3.463)
C4: (8.208,-1.476,0.231)
O5': (9.148,-3.965,-4.645)
C3': (11.201,-1.813,-4.485)
C1': (9.484,-0.411,-3.666)
O4': (8.936,-1.262,-4.663)
C5': (9.607,-3.287,-5.798)
P: (8.350,-5.335,-4.807)
O2: (9.509,1.272,-1.440)
C4': (10.008,-1.881,-5.420)
C2': (11.003,-0.445,-3.844)
O2': (11.432,0.620,-4.675)
N1: (9.020,-0.813,-2.275)
N3: (8.670,-0.243,0.008)
N4: (7.818,-1.762,1.475)
C6: (8.544,-2.079,-2.030)
C5: (8.133,-2.454,-0.809)
O3': (12.425,-1.929,-5.203)
C4: (11.249,-1.749,1.685)
N3: (11.844,-0.625,2.234)
OP1: (14.766,-2.729,-5.513)
OP2: (13.236,-3.842,-3.770)
C2: (12.631,0.295,1.582)
C1': (13.686,0.990,-0.546)
C3': (15.582,-0.066,-1.547)
O5': (14.145,-1.537,-3.427)
O4': (13.467,0.872,-1.942)
C5': (14.521,-0.225,-3.835)
P: (13.689,-2.627,-4.499)
C4': (14.735,0.625,-2.603)
C2': (15.157,0.656,-0.280)
O2': (15.928,1.812,-0.019)
N1: (12.822,0.045,0.231)
O4: (10.568,-2.475,2.401)
O2: (13.114,1.253,2.165)
C6: (12.260,-1.065,-0.382)
C5: (11.499,-1.950,0.278)
O3': (16.957,0.131,-1.809)
N3: (11.844,-0.625,2.234)
OP1: (14.766,-2.729,-5.513)
OP2: (13.236,-3.842,-3.770)
C2: (12.631,0.295,1.582)
C1': (13.686,0.990,-0.546)
C3': (15.582,-0.066,-1.547)
O5': (14.145,-1.537,-3.427)
O4': (13.467,0.872,-1.942)
C5': (14.521,-0.225,-3.835)
P: (13.689,-2.627,-4.499)
C4': (14.735,0.625,-2.603)
C2': (15.157,0.656,-0.280)
O2': (15.928,1.812,-0.019)
N1: (12.822,0.045,0.231)
O4: (10.568,-2.475,2.401)
O2: (13.114,1.253,2.165)
C6: (12.260,-1.065,-0.382)
C5: (11.499,-1.950,0.278)
O3': (16.957,0.131,-1.809)
Image (generated by PyMOL):