Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0240:0241
Extra
PDB:
ATOM 1 O3' C A 239 81.177 134.047 4.388 1.00 67.23 O
ATOM 2 P C A 240 80.399 135.281 3.725 1.00 68.36 P
ATOM 3 OP1 C A 240 79.237 135.600 4.596 1.00 67.96 O
ATOM 4 OP2 C A 240 80.176 134.965 2.293 1.00 67.96 O
ATOM 5 O5' C A 240 81.442 136.479 3.827 1.00 69.57 O
ATOM 6 C5' C A 240 81.756 137.075 5.100 1.00 71.24 C
ATOM 7 C4' C A 240 82.617 138.301 4.910 1.00 72.17 C
ATOM 8 O4' C A 240 83.908 137.914 4.378 1.00 72.85 O
ATOM 9 C3' C A 240 82.107 139.311 3.901 1.00 72.62 C
ATOM 10 O3' C A 240 81.113 140.155 4.443 1.00 73.33 O
ATOM 11 C2' C A 240 83.372 140.070 3.548 1.00 72.87 C
ATOM 12 O2' C A 240 83.745 140.989 4.552 1.00 72.23 O
ATOM 13 C1' C A 240 84.387 138.930 3.512 1.00 73.83 C
ATOM 14 N1 C A 240 84.552 138.361 2.163 1.00 76.46 N
ATOM 15 C2 C A 240 85.365 139.037 1.240 1.00 76.76 C
ATOM 16 O2 C A 240 85.906 140.101 1.581 1.00 76.93 O
ATOM 17 N3 C A 240 85.535 138.515 0.004 1.00 76.71 N
ATOM 18 C4 C A 240 84.930 137.372 -0.326 1.00 77.81 C
ATOM 19 N4 C A 240 85.128 136.892 -1.555 1.00 78.71 N
ATOM 20 C5 C A 240 84.094 136.669 0.588 1.00 78.33 C
ATOM 21 C6 C A 240 83.932 137.195 1.809 1.00 77.69 C
ATOM 22 P U A 241 79.916 140.653 3.505 1.00 76.16 P
ATOM 23 OP1 U A 241 79.027 141.501 4.341 1.00 76.05 O
ATOM 24 OP2 U A 241 79.354 139.479 2.785 1.00 75.31 O
ATOM 25 O5' U A 241 80.636 141.571 2.424 1.00 77.74 O
TER
ATOM 1 O3' C B 240 81.113 140.155 4.443 1.00 73.33 O
ATOM 2 P U B 241 79.916 140.653 3.505 1.00 76.16 P
ATOM 3 OP1 U B 241 79.027 141.501 4.341 1.00 76.05 O
ATOM 4 OP2 U B 241 79.354 139.479 2.785 1.00 75.31 O
ATOM 5 O5' U B 241 80.636 141.571 2.424 1.00 77.74 O
ATOM 6 C5' U B 241 81.335 142.765 2.813 1.00 79.41 C
ATOM 7 C4' U B 241 81.997 143.392 1.609 1.00 81.20 C
ATOM 8 O4' U B 241 83.057 142.528 1.122 1.00 80.21 O
ATOM 9 C3' U B 241 81.102 143.572 0.396 1.00 82.85 C
ATOM 10 O3' U B 241 80.255 144.708 0.497 1.00 85.48 O
ATOM 11 C2' U B 241 82.116 143.682 -0.730 1.00 82.63 C
ATOM 12 O2' U B 241 82.731 144.952 -0.794 1.00 84.32 O
ATOM 13 C1' U B 241 83.152 142.646 -0.291 1.00 81.87 C
ATOM 14 N1 U B 241 82.919 141.326 -0.900 1.00 81.67 N
ATOM 15 C2 U B 241 83.632 141.008 -2.046 1.00 81.26 C
ATOM 16 O2 U B 241 84.442 141.762 -2.559 1.00 80.92 O
ATOM 17 N3 U B 241 83.361 139.771 -2.571 1.00 81.57 N
ATOM 18 C4 U B 241 82.471 138.840 -2.087 1.00 81.36 C
ATOM 19 O4 U B 241 82.334 137.765 -2.679 1.00 81.55 O
ATOM 20 C5 U B 241 81.776 139.241 -0.903 1.00 81.56 C
ATOM 21 C6 U B 241 82.018 140.437 -0.363 1.00 81.04 C
ATOM 22 P C B 242 78.710 144.577 0.077 1.00 88.14 P
ATOM 23 OP1 C B 242 78.129 145.939 0.050 1.00 88.62 O
ATOM 24 OP2 C B 242 78.091 143.529 0.932 1.00 88.46 O
ATOM 25 O5' C B 242 78.768 144.024 -1.415 1.00 89.00 O
TER
ATOM 2 P C A 240 80.399 135.281 3.725 1.00 68.36 P
ATOM 3 OP1 C A 240 79.237 135.600 4.596 1.00 67.96 O
ATOM 4 OP2 C A 240 80.176 134.965 2.293 1.00 67.96 O
ATOM 5 O5' C A 240 81.442 136.479 3.827 1.00 69.57 O
ATOM 6 C5' C A 240 81.756 137.075 5.100 1.00 71.24 C
ATOM 7 C4' C A 240 82.617 138.301 4.910 1.00 72.17 C
ATOM 8 O4' C A 240 83.908 137.914 4.378 1.00 72.85 O
ATOM 9 C3' C A 240 82.107 139.311 3.901 1.00 72.62 C
ATOM 10 O3' C A 240 81.113 140.155 4.443 1.00 73.33 O
ATOM 11 C2' C A 240 83.372 140.070 3.548 1.00 72.87 C
ATOM 12 O2' C A 240 83.745 140.989 4.552 1.00 72.23 O
ATOM 13 C1' C A 240 84.387 138.930 3.512 1.00 73.83 C
ATOM 14 N1 C A 240 84.552 138.361 2.163 1.00 76.46 N
ATOM 15 C2 C A 240 85.365 139.037 1.240 1.00 76.76 C
ATOM 16 O2 C A 240 85.906 140.101 1.581 1.00 76.93 O
ATOM 17 N3 C A 240 85.535 138.515 0.004 1.00 76.71 N
ATOM 18 C4 C A 240 84.930 137.372 -0.326 1.00 77.81 C
ATOM 19 N4 C A 240 85.128 136.892 -1.555 1.00 78.71 N
ATOM 20 C5 C A 240 84.094 136.669 0.588 1.00 78.33 C
ATOM 21 C6 C A 240 83.932 137.195 1.809 1.00 77.69 C
ATOM 22 P U A 241 79.916 140.653 3.505 1.00 76.16 P
ATOM 23 OP1 U A 241 79.027 141.501 4.341 1.00 76.05 O
ATOM 24 OP2 U A 241 79.354 139.479 2.785 1.00 75.31 O
ATOM 25 O5' U A 241 80.636 141.571 2.424 1.00 77.74 O
TER
ATOM 1 O3' C B 240 81.113 140.155 4.443 1.00 73.33 O
ATOM 2 P U B 241 79.916 140.653 3.505 1.00 76.16 P
ATOM 3 OP1 U B 241 79.027 141.501 4.341 1.00 76.05 O
ATOM 4 OP2 U B 241 79.354 139.479 2.785 1.00 75.31 O
ATOM 5 O5' U B 241 80.636 141.571 2.424 1.00 77.74 O
ATOM 6 C5' U B 241 81.335 142.765 2.813 1.00 79.41 C
ATOM 7 C4' U B 241 81.997 143.392 1.609 1.00 81.20 C
ATOM 8 O4' U B 241 83.057 142.528 1.122 1.00 80.21 O
ATOM 9 C3' U B 241 81.102 143.572 0.396 1.00 82.85 C
ATOM 10 O3' U B 241 80.255 144.708 0.497 1.00 85.48 O
ATOM 11 C2' U B 241 82.116 143.682 -0.730 1.00 82.63 C
ATOM 12 O2' U B 241 82.731 144.952 -0.794 1.00 84.32 O
ATOM 13 C1' U B 241 83.152 142.646 -0.291 1.00 81.87 C
ATOM 14 N1 U B 241 82.919 141.326 -0.900 1.00 81.67 N
ATOM 15 C2 U B 241 83.632 141.008 -2.046 1.00 81.26 C
ATOM 16 O2 U B 241 84.442 141.762 -2.559 1.00 80.92 O
ATOM 17 N3 U B 241 83.361 139.771 -2.571 1.00 81.57 N
ATOM 18 C4 U B 241 82.471 138.840 -2.087 1.00 81.36 C
ATOM 19 O4 U B 241 82.334 137.765 -2.679 1.00 81.55 O
ATOM 20 C5 U B 241 81.776 139.241 -0.903 1.00 81.56 C
ATOM 21 C6 U B 241 82.018 140.437 -0.363 1.00 81.04 C
ATOM 22 P C B 242 78.710 144.577 0.077 1.00 88.14 P
ATOM 23 OP1 C B 242 78.129 145.939 0.050 1.00 88.62 O
ATOM 24 OP2 C B 242 78.091 143.529 0.932 1.00 88.46 O
ATOM 25 O5' C B 242 78.768 144.024 -1.415 1.00 89.00 O
TER
Atoms:
C2: (85.365,139.037,1.240)
OP1: (79.237,135.600,4.596)
OP2: (80.176,134.965,2.293)
C4: (84.930,137.372,-0.326)
O5': (81.442,136.479,3.827)
C3': (82.107,139.311,3.901)
C1': (84.387,138.930,3.512)
O4': (83.908,137.914,4.378)
C5': (81.756,137.075,5.100)
P: (80.399,135.281,3.725)
O2: (85.906,140.101,1.581)
C4': (82.617,138.301,4.910)
C2': (83.372,140.070,3.548)
O2': (83.745,140.989,4.552)
N1: (84.552,138.361,2.163)
N3: (85.535,138.515,0.004)
N4: (85.128,136.892,-1.555)
C6: (83.932,137.195,1.809)
C5: (84.094,136.669,0.588)
O3': (81.113,140.155,4.443)
OP1: (79.237,135.600,4.596)
OP2: (80.176,134.965,2.293)
C4: (84.930,137.372,-0.326)
O5': (81.442,136.479,3.827)
C3': (82.107,139.311,3.901)
C1': (84.387,138.930,3.512)
O4': (83.908,137.914,4.378)
C5': (81.756,137.075,5.100)
P: (80.399,135.281,3.725)
O2: (85.906,140.101,1.581)
C4': (82.617,138.301,4.910)
C2': (83.372,140.070,3.548)
O2': (83.745,140.989,4.552)
N1: (84.552,138.361,2.163)
N3: (85.535,138.515,0.004)
N4: (85.128,136.892,-1.555)
C6: (83.932,137.195,1.809)
C5: (84.094,136.669,0.588)
O3': (81.113,140.155,4.443)
C4: (82.471,138.840,-2.087)
N3: (83.361,139.771,-2.571)
OP1: (79.027,141.501,4.341)
OP2: (79.354,139.479,2.785)
C2: (83.632,141.008,-2.046)
C1': (83.152,142.646,-0.291)
C3': (81.102,143.572,0.396)
O5': (80.636,141.571,2.424)
O4': (83.057,142.528,1.122)
C5': (81.335,142.765,2.813)
P: (79.916,140.653,3.505)
C4': (81.997,143.392,1.609)
C2': (82.116,143.682,-0.730)
O2': (82.731,144.952,-0.794)
N1: (82.919,141.326,-0.900)
O4: (82.334,137.765,-2.679)
O2: (84.442,141.762,-2.559)
C6: (82.018,140.437,-0.363)
C5: (81.776,139.241,-0.903)
O3': (80.255,144.708,0.497)
N3: (83.361,139.771,-2.571)
OP1: (79.027,141.501,4.341)
OP2: (79.354,139.479,2.785)
C2: (83.632,141.008,-2.046)
C1': (83.152,142.646,-0.291)
C3': (81.102,143.572,0.396)
O5': (80.636,141.571,2.424)
O4': (83.057,142.528,1.122)
C5': (81.335,142.765,2.813)
P: (79.916,140.653,3.505)
C4': (81.997,143.392,1.609)
C2': (82.116,143.682,-0.730)
O2': (82.731,144.952,-0.794)
N1: (82.919,141.326,-0.900)
O4: (82.334,137.765,-2.679)
O2: (84.442,141.762,-2.559)
C6: (82.018,140.437,-0.363)
C5: (81.776,139.241,-0.903)
O3': (80.255,144.708,0.497)
Image (generated by PyMOL):