Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0240:0241
Extra
PDB:
ATOM 1 O3' C A 239 80.497 132.795 3.749 1.00 62.13 O
ATOM 2 P C A 240 79.711 134.016 3.077 1.00 60.60 P
ATOM 3 OP1 C A 240 78.563 134.357 3.950 1.00 61.83 O
ATOM 4 OP2 C A 240 79.464 133.686 1.652 1.00 62.13 O
ATOM 5 O5' C A 240 80.772 135.201 3.166 1.00 62.59 O
ATOM 6 C5' C A 240 81.105 135.792 4.437 1.00 63.79 C
ATOM 7 C4' C A 240 81.936 137.038 4.239 1.00 66.02 C
ATOM 8 O4' C A 240 83.240 136.676 3.717 1.00 66.85 O
ATOM 9 C3' C A 240 81.402 138.033 3.225 1.00 67.53 C
ATOM 10 O3' C A 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 11 C2' C A 240 82.654 138.808 2.849 1.00 67.67 C
ATOM 12 O2' C A 240 83.026 139.765 3.817 1.00 67.74 O
ATOM 13 C1' C A 240 83.694 137.689 2.830 1.00 67.86 C
ATOM 14 N1 C A 240 83.855 137.098 1.490 1.00 69.43 N
ATOM 15 C2 C A 240 84.761 137.687 0.595 1.00 69.65 C
ATOM 16 O2 C A 240 85.393 138.697 0.952 1.00 68.96 O
ATOM 17 N3 C A 240 84.921 137.142 -0.635 1.00 69.72 N
ATOM 18 C4 C A 240 84.219 136.061 -0.985 1.00 69.71 C
ATOM 19 N4 C A 240 84.412 135.555 -2.205 1.00 69.75 N
ATOM 20 C5 C A 240 83.285 135.449 -0.098 1.00 69.98 C
ATOM 21 C6 C A 240 83.137 135.993 1.117 1.00 69.75 C
ATOM 22 P U A 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 23 OP1 U A 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 24 OP2 U A 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 25 O5' U A 241 80.009 140.304 1.733 1.00 74.07 O
TER
ATOM 1 O3' C B 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 2 P U B 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 3 OP1 U B 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 4 OP2 U B 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 5 O5' U B 241 80.009 140.304 1.733 1.00 74.07 O
ATOM 6 C5' U B 241 80.593 141.556 2.144 1.00 76.68 C
ATOM 7 C4' U B 241 81.259 142.240 0.970 1.00 78.69 C
ATOM 8 O4' U B 241 82.388 141.446 0.516 1.00 78.81 O
ATOM 9 C3' U B 241 80.419 142.409 -0.286 1.00 80.48 C
ATOM 10 O3' U B 241 79.510 143.503 -0.204 1.00 82.82 O
ATOM 11 C2' U B 241 81.489 142.615 -1.348 1.00 80.16 C
ATOM 12 O2' U B 241 82.036 143.922 -1.321 1.00 79.23 O
ATOM 13 C1' U B 241 82.555 141.617 -0.885 1.00 79.52 C
ATOM 14 N1 U B 241 82.439 140.305 -1.545 1.00 78.39 N
ATOM 15 C2 U B 241 83.182 140.094 -2.696 1.00 78.33 C
ATOM 16 O2 U B 241 83.936 140.931 -3.166 1.00 77.97 O
ATOM 17 N3 U B 241 83.008 138.863 -3.283 1.00 77.72 N
ATOM 18 C4 U B 241 82.186 137.845 -2.851 1.00 75.90 C
ATOM 19 O4 U B 241 82.125 136.802 -3.501 1.00 74.18 O
ATOM 20 C5 U B 241 81.468 138.130 -1.650 1.00 76.57 C
ATOM 21 C6 U B 241 81.616 139.317 -1.050 1.00 78.03 C
ATOM 22 P C B 242 77.980 143.294 -0.656 1.00 85.08 P
ATOM 23 OP1 C B 242 77.339 144.630 -0.792 1.00 84.65 O
ATOM 24 OP2 C B 242 77.383 142.286 0.258 1.00 84.42 O
ATOM 25 O5' C B 242 78.093 142.643 -2.106 1.00 85.17 O
TER
ATOM 2 P C A 240 79.711 134.016 3.077 1.00 60.60 P
ATOM 3 OP1 C A 240 78.563 134.357 3.950 1.00 61.83 O
ATOM 4 OP2 C A 240 79.464 133.686 1.652 1.00 62.13 O
ATOM 5 O5' C A 240 80.772 135.201 3.166 1.00 62.59 O
ATOM 6 C5' C A 240 81.105 135.792 4.437 1.00 63.79 C
ATOM 7 C4' C A 240 81.936 137.038 4.239 1.00 66.02 C
ATOM 8 O4' C A 240 83.240 136.676 3.717 1.00 66.85 O
ATOM 9 C3' C A 240 81.402 138.033 3.225 1.00 67.53 C
ATOM 10 O3' C A 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 11 C2' C A 240 82.654 138.808 2.849 1.00 67.67 C
ATOM 12 O2' C A 240 83.026 139.765 3.817 1.00 67.74 O
ATOM 13 C1' C A 240 83.694 137.689 2.830 1.00 67.86 C
ATOM 14 N1 C A 240 83.855 137.098 1.490 1.00 69.43 N
ATOM 15 C2 C A 240 84.761 137.687 0.595 1.00 69.65 C
ATOM 16 O2 C A 240 85.393 138.697 0.952 1.00 68.96 O
ATOM 17 N3 C A 240 84.921 137.142 -0.635 1.00 69.72 N
ATOM 18 C4 C A 240 84.219 136.061 -0.985 1.00 69.71 C
ATOM 19 N4 C A 240 84.412 135.555 -2.205 1.00 69.75 N
ATOM 20 C5 C A 240 83.285 135.449 -0.098 1.00 69.98 C
ATOM 21 C6 C A 240 83.137 135.993 1.117 1.00 69.75 C
ATOM 22 P U A 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 23 OP1 U A 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 24 OP2 U A 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 25 O5' U A 241 80.009 140.304 1.733 1.00 74.07 O
TER
ATOM 1 O3' C B 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 2 P U B 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 3 OP1 U B 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 4 OP2 U B 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 5 O5' U B 241 80.009 140.304 1.733 1.00 74.07 O
ATOM 6 C5' U B 241 80.593 141.556 2.144 1.00 76.68 C
ATOM 7 C4' U B 241 81.259 142.240 0.970 1.00 78.69 C
ATOM 8 O4' U B 241 82.388 141.446 0.516 1.00 78.81 O
ATOM 9 C3' U B 241 80.419 142.409 -0.286 1.00 80.48 C
ATOM 10 O3' U B 241 79.510 143.503 -0.204 1.00 82.82 O
ATOM 11 C2' U B 241 81.489 142.615 -1.348 1.00 80.16 C
ATOM 12 O2' U B 241 82.036 143.922 -1.321 1.00 79.23 O
ATOM 13 C1' U B 241 82.555 141.617 -0.885 1.00 79.52 C
ATOM 14 N1 U B 241 82.439 140.305 -1.545 1.00 78.39 N
ATOM 15 C2 U B 241 83.182 140.094 -2.696 1.00 78.33 C
ATOM 16 O2 U B 241 83.936 140.931 -3.166 1.00 77.97 O
ATOM 17 N3 U B 241 83.008 138.863 -3.283 1.00 77.72 N
ATOM 18 C4 U B 241 82.186 137.845 -2.851 1.00 75.90 C
ATOM 19 O4 U B 241 82.125 136.802 -3.501 1.00 74.18 O
ATOM 20 C5 U B 241 81.468 138.130 -1.650 1.00 76.57 C
ATOM 21 C6 U B 241 81.616 139.317 -1.050 1.00 78.03 C
ATOM 22 P C B 242 77.980 143.294 -0.656 1.00 85.08 P
ATOM 23 OP1 C B 242 77.339 144.630 -0.792 1.00 84.65 O
ATOM 24 OP2 C B 242 77.383 142.286 0.258 1.00 84.42 O
ATOM 25 O5' C B 242 78.093 142.643 -2.106 1.00 85.17 O
TER
Atoms:
C2: (84.761,137.687,0.595)
OP1: (78.563,134.357,3.950)
OP2: (79.464,133.686,1.652)
C4: (84.219,136.061,-0.985)
O5': (80.772,135.201,3.166)
C3': (81.402,138.033,3.225)
C1': (83.694,137.689,2.830)
O4': (83.240,136.676,3.717)
C5': (81.105,135.792,4.437)
P: (79.711,134.016,3.077)
O2: (85.393,138.697,0.952)
C4': (81.936,137.038,4.239)
C2': (82.654,138.808,2.849)
O2': (83.026,139.765,3.817)
N1: (83.855,137.098,1.490)
N3: (84.921,137.142,-0.635)
N4: (84.412,135.555,-2.205)
C6: (83.137,135.993,1.117)
C5: (83.285,135.449,-0.098)
O3': (80.376,138.858,3.750)
OP1: (78.563,134.357,3.950)
OP2: (79.464,133.686,1.652)
C4: (84.219,136.061,-0.985)
O5': (80.772,135.201,3.166)
C3': (81.402,138.033,3.225)
C1': (83.694,137.689,2.830)
O4': (83.240,136.676,3.717)
C5': (81.105,135.792,4.437)
P: (79.711,134.016,3.077)
O2: (85.393,138.697,0.952)
C4': (81.936,137.038,4.239)
C2': (82.654,138.808,2.849)
O2': (83.026,139.765,3.817)
N1: (83.855,137.098,1.490)
N3: (84.921,137.142,-0.635)
N4: (84.412,135.555,-2.205)
C6: (83.137,135.993,1.117)
C5: (83.285,135.449,-0.098)
O3': (80.376,138.858,3.750)
C4: (82.186,137.845,-2.851)
N3: (83.008,138.863,-3.283)
OP1: (78.306,140.255,3.567)
OP2: (78.663,138.231,2.022)
C2: (83.182,140.094,-2.696)
C1': (82.555,141.617,-0.885)
C3': (80.419,142.409,-0.286)
O5': (80.009,140.304,1.733)
O4': (82.388,141.446,0.516)
C5': (80.593,141.556,2.144)
P: (79.219,139.389,2.772)
C4': (81.259,142.240,0.970)
C2': (81.489,142.615,-1.348)
O2': (82.036,143.922,-1.321)
N1: (82.439,140.305,-1.545)
O4: (82.125,136.802,-3.501)
O2: (83.936,140.931,-3.166)
C6: (81.616,139.317,-1.050)
C5: (81.468,138.130,-1.650)
O3': (79.510,143.503,-0.204)
N3: (83.008,138.863,-3.283)
OP1: (78.306,140.255,3.567)
OP2: (78.663,138.231,2.022)
C2: (83.182,140.094,-2.696)
C1': (82.555,141.617,-0.885)
C3': (80.419,142.409,-0.286)
O5': (80.009,140.304,1.733)
O4': (82.388,141.446,0.516)
C5': (80.593,141.556,2.144)
P: (79.219,139.389,2.772)
C4': (81.259,142.240,0.970)
C2': (81.489,142.615,-1.348)
O2': (82.036,143.922,-1.321)
N1: (82.439,140.305,-1.545)
O4: (82.125,136.802,-3.501)
O2: (83.936,140.931,-3.166)
C6: (81.616,139.317,-1.050)
C5: (81.468,138.130,-1.650)
O3': (79.510,143.503,-0.204)
Image (generated by PyMOL):