Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:024:025
Extra
PDB:
ATOM 1 O3' G A 23 46.084 130.140 47.998 1.00 30.46 O
ATOM 2 P C A 24 46.837 129.204 46.944 1.00 38.77 P
ATOM 3 OP1 C A 24 48.282 129.182 47.203 1.00 33.87 O
ATOM 4 OP2 C A 24 46.342 129.610 45.593 1.00 39.27 O
ATOM 5 O5' C A 24 46.252 127.752 47.238 1.00 36.99 O
ATOM 6 C5' C A 24 46.244 127.199 48.574 1.00 35.05 C
ATOM 7 C4' C A 24 45.364 125.965 48.623 1.00 33.80 C
ATOM 8 O4' C A 24 43.964 126.349 48.521 1.00 33.01 O
ATOM 9 C3' C A 24 45.556 124.984 47.476 1.00 31.67 C
ATOM 10 O3' C A 24 46.697 124.156 47.664 1.00 31.96 O
ATOM 11 C2' C A 24 44.228 124.238 47.477 1.00 32.75 C
ATOM 12 O2' C A 24 44.099 123.303 48.535 1.00 30.36 O
ATOM 13 C1' C A 24 43.255 125.381 47.761 1.00 33.63 C
ATOM 14 N1 C A 24 42.721 126.033 46.545 1.00 37.56 N
ATOM 15 C2 C A 24 41.702 125.391 45.810 1.00 37.71 C
ATOM 16 O2 C A 24 41.334 124.259 46.152 1.00 37.38 O
ATOM 17 N3 C A 24 41.158 126.024 44.744 1.00 37.07 N
ATOM 18 C4 C A 24 41.599 127.237 44.391 1.00 39.90 C
ATOM 19 N4 C A 24 41.004 127.850 43.368 1.00 38.91 N
ATOM 20 C5 C A 24 42.662 127.885 45.085 1.00 39.13 C
ATOM 21 C6 C A 24 43.188 127.255 46.144 1.00 38.28 C
ATOM 22 P U A 25 47.582 123.729 46.395 1.00 31.35 P
ATOM 23 OP1 U A 25 48.793 123.030 46.861 1.00 31.07 O
ATOM 24 OP2 U A 25 47.713 124.909 45.513 1.00 33.82 O
ATOM 25 O5' U A 25 46.676 122.679 45.612 1.00 33.11 O
TER
ATOM 1 O3' C B 24 46.697 124.156 47.664 1.00 31.96 O
ATOM 2 P U B 25 47.582 123.729 46.395 1.00 31.35 P
ATOM 3 OP1 U B 25 48.793 123.030 46.861 1.00 31.07 O
ATOM 4 OP2 U B 25 47.713 124.909 45.513 1.00 33.82 O
ATOM 5 O5' U B 25 46.676 122.679 45.612 1.00 33.11 O
ATOM 6 C5' U B 25 46.334 121.412 46.201 1.00 33.46 C
ATOM 7 C4' U B 25 45.220 120.752 45.422 1.00 31.32 C
ATOM 8 O4' U B 25 44.035 121.595 45.459 1.00 32.89 O
ATOM 9 C3' U B 25 45.451 120.552 43.933 1.00 32.49 C
ATOM 10 O3' U B 25 46.291 119.444 43.668 1.00 34.33 O
ATOM 11 C2' U B 25 44.028 120.363 43.433 1.00 33.42 C
ATOM 12 O2' U B 25 43.475 119.099 43.766 1.00 34.07 O
ATOM 13 C1' U B 25 43.298 121.420 44.256 1.00 34.67 C
ATOM 14 N1 U B 25 43.209 122.705 43.544 1.00 35.49 N
ATOM 15 C2 U B 25 42.195 122.837 42.606 1.00 37.64 C
ATOM 16 O2 U B 25 41.411 121.937 42.343 1.00 40.37 O
ATOM 17 N3 U B 25 42.132 124.056 41.984 1.00 37.71 N
ATOM 18 C4 U B 25 42.965 125.136 42.185 1.00 38.21 C
ATOM 19 O4 U B 25 42.764 126.175 41.552 1.00 36.34 O
ATOM 20 C5 U B 25 44.010 124.919 43.151 1.00 37.27 C
ATOM 21 C6 U B 25 44.090 123.744 43.784 1.00 36.83 C
ATOM 22 P C B 26 47.027 119.323 42.247 1.00 35.39 P
ATOM 23 OP1 C B 26 47.949 118.166 42.328 1.00 35.97 O
ATOM 24 OP2 C B 26 47.556 120.648 41.866 1.00 38.64 O
ATOM 25 O5' C B 26 45.851 118.956 41.245 1.00 36.86 O
TER
ATOM 2 P C A 24 46.837 129.204 46.944 1.00 38.77 P
ATOM 3 OP1 C A 24 48.282 129.182 47.203 1.00 33.87 O
ATOM 4 OP2 C A 24 46.342 129.610 45.593 1.00 39.27 O
ATOM 5 O5' C A 24 46.252 127.752 47.238 1.00 36.99 O
ATOM 6 C5' C A 24 46.244 127.199 48.574 1.00 35.05 C
ATOM 7 C4' C A 24 45.364 125.965 48.623 1.00 33.80 C
ATOM 8 O4' C A 24 43.964 126.349 48.521 1.00 33.01 O
ATOM 9 C3' C A 24 45.556 124.984 47.476 1.00 31.67 C
ATOM 10 O3' C A 24 46.697 124.156 47.664 1.00 31.96 O
ATOM 11 C2' C A 24 44.228 124.238 47.477 1.00 32.75 C
ATOM 12 O2' C A 24 44.099 123.303 48.535 1.00 30.36 O
ATOM 13 C1' C A 24 43.255 125.381 47.761 1.00 33.63 C
ATOM 14 N1 C A 24 42.721 126.033 46.545 1.00 37.56 N
ATOM 15 C2 C A 24 41.702 125.391 45.810 1.00 37.71 C
ATOM 16 O2 C A 24 41.334 124.259 46.152 1.00 37.38 O
ATOM 17 N3 C A 24 41.158 126.024 44.744 1.00 37.07 N
ATOM 18 C4 C A 24 41.599 127.237 44.391 1.00 39.90 C
ATOM 19 N4 C A 24 41.004 127.850 43.368 1.00 38.91 N
ATOM 20 C5 C A 24 42.662 127.885 45.085 1.00 39.13 C
ATOM 21 C6 C A 24 43.188 127.255 46.144 1.00 38.28 C
ATOM 22 P U A 25 47.582 123.729 46.395 1.00 31.35 P
ATOM 23 OP1 U A 25 48.793 123.030 46.861 1.00 31.07 O
ATOM 24 OP2 U A 25 47.713 124.909 45.513 1.00 33.82 O
ATOM 25 O5' U A 25 46.676 122.679 45.612 1.00 33.11 O
TER
ATOM 1 O3' C B 24 46.697 124.156 47.664 1.00 31.96 O
ATOM 2 P U B 25 47.582 123.729 46.395 1.00 31.35 P
ATOM 3 OP1 U B 25 48.793 123.030 46.861 1.00 31.07 O
ATOM 4 OP2 U B 25 47.713 124.909 45.513 1.00 33.82 O
ATOM 5 O5' U B 25 46.676 122.679 45.612 1.00 33.11 O
ATOM 6 C5' U B 25 46.334 121.412 46.201 1.00 33.46 C
ATOM 7 C4' U B 25 45.220 120.752 45.422 1.00 31.32 C
ATOM 8 O4' U B 25 44.035 121.595 45.459 1.00 32.89 O
ATOM 9 C3' U B 25 45.451 120.552 43.933 1.00 32.49 C
ATOM 10 O3' U B 25 46.291 119.444 43.668 1.00 34.33 O
ATOM 11 C2' U B 25 44.028 120.363 43.433 1.00 33.42 C
ATOM 12 O2' U B 25 43.475 119.099 43.766 1.00 34.07 O
ATOM 13 C1' U B 25 43.298 121.420 44.256 1.00 34.67 C
ATOM 14 N1 U B 25 43.209 122.705 43.544 1.00 35.49 N
ATOM 15 C2 U B 25 42.195 122.837 42.606 1.00 37.64 C
ATOM 16 O2 U B 25 41.411 121.937 42.343 1.00 40.37 O
ATOM 17 N3 U B 25 42.132 124.056 41.984 1.00 37.71 N
ATOM 18 C4 U B 25 42.965 125.136 42.185 1.00 38.21 C
ATOM 19 O4 U B 25 42.764 126.175 41.552 1.00 36.34 O
ATOM 20 C5 U B 25 44.010 124.919 43.151 1.00 37.27 C
ATOM 21 C6 U B 25 44.090 123.744 43.784 1.00 36.83 C
ATOM 22 P C B 26 47.027 119.323 42.247 1.00 35.39 P
ATOM 23 OP1 C B 26 47.949 118.166 42.328 1.00 35.97 O
ATOM 24 OP2 C B 26 47.556 120.648 41.866 1.00 38.64 O
ATOM 25 O5' C B 26 45.851 118.956 41.245 1.00 36.86 O
TER
Atoms:
C2: (41.702,125.391,45.810)
OP1: (48.282,129.182,47.203)
OP2: (46.342,129.610,45.593)
C4: (41.599,127.237,44.391)
O5': (46.252,127.752,47.238)
C3': (45.556,124.984,47.476)
C1': (43.255,125.381,47.761)
O4': (43.964,126.349,48.521)
C5': (46.244,127.199,48.574)
P: (46.837,129.204,46.944)
O2: (41.334,124.259,46.152)
C4': (45.364,125.965,48.623)
C2': (44.228,124.238,47.477)
O2': (44.099,123.303,48.535)
N1: (42.721,126.033,46.545)
N3: (41.158,126.024,44.744)
N4: (41.004,127.850,43.368)
C6: (43.188,127.255,46.144)
C5: (42.662,127.885,45.085)
O3': (46.697,124.156,47.664)
OP1: (48.282,129.182,47.203)
OP2: (46.342,129.610,45.593)
C4: (41.599,127.237,44.391)
O5': (46.252,127.752,47.238)
C3': (45.556,124.984,47.476)
C1': (43.255,125.381,47.761)
O4': (43.964,126.349,48.521)
C5': (46.244,127.199,48.574)
P: (46.837,129.204,46.944)
O2: (41.334,124.259,46.152)
C4': (45.364,125.965,48.623)
C2': (44.228,124.238,47.477)
O2': (44.099,123.303,48.535)
N1: (42.721,126.033,46.545)
N3: (41.158,126.024,44.744)
N4: (41.004,127.850,43.368)
C6: (43.188,127.255,46.144)
C5: (42.662,127.885,45.085)
O3': (46.697,124.156,47.664)
C4: (42.965,125.136,42.185)
N3: (42.132,124.056,41.984)
OP1: (48.793,123.030,46.861)
OP2: (47.713,124.909,45.513)
C2: (42.195,122.837,42.606)
C1': (43.298,121.420,44.256)
C3': (45.451,120.552,43.933)
O5': (46.676,122.679,45.612)
O4': (44.035,121.595,45.459)
C5': (46.334,121.412,46.201)
P: (47.582,123.729,46.395)
C4': (45.220,120.752,45.422)
C2': (44.028,120.363,43.433)
O2': (43.475,119.099,43.766)
N1: (43.209,122.705,43.544)
O4: (42.764,126.175,41.552)
O2: (41.411,121.937,42.343)
C6: (44.090,123.744,43.784)
C5: (44.010,124.919,43.151)
O3': (46.291,119.444,43.668)
N3: (42.132,124.056,41.984)
OP1: (48.793,123.030,46.861)
OP2: (47.713,124.909,45.513)
C2: (42.195,122.837,42.606)
C1': (43.298,121.420,44.256)
C3': (45.451,120.552,43.933)
O5': (46.676,122.679,45.612)
O4': (44.035,121.595,45.459)
C5': (46.334,121.412,46.201)
P: (47.582,123.729,46.395)
C4': (45.220,120.752,45.422)
C2': (44.028,120.363,43.433)
O2': (43.475,119.099,43.766)
N1: (43.209,122.705,43.544)
O4: (42.764,126.175,41.552)
O2: (41.411,121.937,42.343)
C6: (44.090,123.744,43.784)
C5: (44.010,124.919,43.151)
O3': (46.291,119.444,43.668)
Image (generated by PyMOL):