ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5591:5592

Extra

PDB:
ATOM 1 O3' U A 590 123.850 -6.468 232.358 1.00 37.80 O
ATOM 2 P C A 591 123.580 -7.700 233.321 1.00 34.05 P
ATOM 3 OP1 C A 591 123.378 -8.884 232.432 1.00 34.29 O
ATOM 4 OP2 C A 591 122.533 -7.301 234.258 1.00 34.05 O
ATOM 5 O5' C A 591 124.934 -7.882 234.080 1.00 33.82 O
ATOM 6 C5' C A 591 126.040 -8.377 233.368 1.00 33.82 C
ATOM 7 C4' C A 591 127.322 -7.959 233.986 1.00 33.57 C
ATOM 8 O4' C A 591 127.386 -6.522 234.046 1.00 33.43 O
ATOM 9 C3' C A 591 127.521 -8.377 235.417 1.00 33.44 C
ATOM 10 O3' C A 591 127.879 -9.743 235.562 1.00 33.52 O
ATOM 11 C2' C A 591 128.583 -7.406 235.877 1.00 33.20 C
ATOM 12 O2' C A 591 129.855 -7.839 235.468 1.00 33.15 O
ATOM 13 C1' C A 591 128.208 -6.138 235.097 1.00 33.20 C
ATOM 14 N1 C A 591 127.501 -5.200 235.976 1.00 33.12 N
ATOM 15 C2 C A 591 128.280 -4.121 236.292 1.00 32.92 C
ATOM 16 O2 C A 591 129.313 -4.045 235.650 1.00 32.87 O
ATOM 17 N3 C A 591 127.891 -3.189 237.175 1.00 32.82 N
ATOM 18 C4 C A 591 126.768 -3.370 237.819 1.00 32.90 C
ATOM 19 N4 C A 591 126.506 -2.399 238.665 1.00 32.79 N
ATOM 20 C5 C A 591 125.908 -4.471 237.571 1.00 33.09 C
ATOM 21 C6 C A 591 126.318 -5.368 236.656 1.00 33.20 C
ATOM 22 P U A 592 127.521 -10.486 236.919 1.00 30.80 P
ATOM 23 OP1 U A 592 128.263 -11.789 236.957 1.00 30.86 O
ATOM 24 OP2 U A 592 126.088 -10.493 237.029 1.00 30.95 O
ATOM 25 O5' U A 592 128.108 -9.505 238.020 1.00 30.54 O
TER

ATOM 1 O3' C B 591 127.879 -9.743 235.562 1.00 33.52 O
ATOM 2 P U B 592 127.521 -10.486 236.919 1.00 30.80 P
ATOM 3 OP1 U B 592 128.263 -11.789 236.957 1.00 30.86 O
ATOM 4 OP2 U B 592 126.088 -10.493 237.029 1.00 30.95 O
ATOM 5 O5' U B 592 128.108 -9.505 238.020 1.00 30.54 O
ATOM 6 C5' U B 592 129.468 -9.624 238.443 1.00 30.38 C
ATOM 7 C4' U B 592 129.824 -8.592 239.449 1.00 30.16 C
ATOM 8 O4' U B 592 129.147 -7.359 239.127 1.00 30.14 O
ATOM 9 C3' U B 592 129.364 -8.913 240.812 1.00 30.14 C
ATOM 10 O3' U B 592 130.239 -9.777 241.446 1.00 30.09 O
ATOM 11 C2' U B 592 129.202 -7.545 241.471 1.00 29.98 C
ATOM 12 O2' U B 592 130.423 -7.029 241.905 1.00 29.79 O
ATOM 13 C1' U B 592 128.740 -6.705 240.298 1.00 30.04 C
ATOM 14 N1 U B 592 127.325 -6.618 240.275 1.00 30.18 N
ATOM 15 C2 U B 592 126.731 -5.740 241.095 1.00 30.12 C
ATOM 16 O2 U B 592 127.321 -4.966 241.797 1.00 29.95 O
ATOM 17 N3 U B 592 125.389 -5.775 241.066 1.00 30.28 N
ATOM 18 C4 U B 592 124.618 -6.566 240.341 1.00 30.48 C
ATOM 19 O4 U B 592 123.423 -6.434 240.447 1.00 30.61 O
ATOM 20 C5 U B 592 125.302 -7.475 239.530 1.00 30.54 C
ATOM 21 C6 U B 592 126.618 -7.499 239.525 1.00 30.39 C
ATOM 22 P U B 593 129.679 -11.060 242.166 1.00 31.50 P
ATOM 23 OP1 U B 593 130.761 -12.005 242.270 1.00 31.50 O
ATOM 24 OP2 U B 593 128.476 -11.437 241.441 1.00 31.71 O
ATOM 25 O5' U B 593 129.281 -10.550 243.608 1.00 31.41 O
TER

Atoms:
C2: (128.280,-4.121,236.292)
OP1: (123.378,-8.884,232.432)
OP2: (122.533,-7.301,234.258)
C4: (126.768,-3.370,237.819)
O5': (124.934,-7.882,234.080)
C3': (127.521,-8.377,235.417)
C1': (128.208,-6.138,235.097)
O4': (127.386,-6.522,234.046)
C5': (126.040,-8.377,233.368)
P: (123.580,-7.700,233.321)
O2: (129.313,-4.045,235.650)
C4': (127.322,-7.959,233.986)
C2': (128.583,-7.406,235.877)
O2': (129.855,-7.839,235.468)
N1: (127.501,-5.200,235.976)
N3: (127.891,-3.189,237.175)
N4: (126.506,-2.399,238.665)
C6: (126.318,-5.368,236.656)
C5: (125.908,-4.471,237.571)
O3': (127.879,-9.743,235.562)
C4: (124.618,-6.566,240.341)
N3: (125.389,-5.775,241.066)
OP1: (128.263,-11.789,236.957)
OP2: (126.088,-10.493,237.029)
C2: (126.731,-5.740,241.095)
C1': (128.740,-6.705,240.298)
C3': (129.364,-8.913,240.812)
O5': (128.108,-9.505,238.020)
O4': (129.147,-7.359,239.127)
C5': (129.468,-9.624,238.443)
P: (127.521,-10.486,236.919)
C4': (129.824,-8.592,239.449)
C2': (129.202,-7.545,241.471)
O2': (130.423,-7.029,241.905)
N1: (127.325,-6.618,240.275)
O4: (123.423,-6.434,240.447)
O2: (127.321,-4.966,241.797)
C6: (126.618,-7.499,239.525)
C5: (125.302,-7.475,239.530)
O3': (130.239,-9.777,241.446)
Image (generated by PyMOL):
PyMOL image
show in jmol