Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y99:A4:A5
Extra
PDB:
ATOM 1 O3' G A 3 -0.430 -2.279 37.727 1.00 46.54 O
ATOM 2 P C A 4 -0.046 -1.559 36.348 1.00 48.95 P
ATOM 3 OP1 C A 4 -0.850 -0.316 36.236 1.00 49.40 O
ATOM 4 OP2 C A 4 -0.119 -2.584 35.272 1.00 46.00 O
ATOM 5 O5' C A 4 1.483 -1.160 36.545 1.00 46.78 O
ATOM 6 C5' C A 4 1.865 -0.138 37.481 1.00 48.31 C
ATOM 7 C4' C A 4 3.363 0.047 37.460 1.00 48.44 C
ATOM 8 O4' C A 4 3.999 -1.199 37.850 1.00 48.16 O
ATOM 9 C3' C A 4 3.951 0.338 36.092 1.00 47.76 C
ATOM 10 O3' C A 4 3.851 1.712 35.750 1.00 44.04 O
ATOM 11 C2' C A 4 5.389 -0.129 36.258 1.00 46.84 C
ATOM 12 O2' C A 4 6.186 0.779 36.983 1.00 48.59 O
ATOM 13 C1' C A 4 5.187 -1.387 37.099 1.00 45.17 C
ATOM 14 N1 C A 4 5.010 -2.577 36.258 1.00 43.18 N
ATOM 15 C2 C A 4 6.140 -3.182 35.716 1.00 42.25 C
ATOM 16 O2 C A 4 7.251 -2.694 35.962 1.00 47.86 O
ATOM 17 N3 C A 4 5.997 -4.279 34.941 1.00 40.35 N
ATOM 18 C4 C A 4 4.780 -4.771 34.703 1.00 37.15 C
ATOM 19 N4 C A 4 4.686 -5.862 33.939 1.00 36.55 N
ATOM 20 C5 C A 4 3.607 -4.168 35.241 1.00 37.16 C
ATOM 21 C6 C A 4 3.766 -3.083 36.006 1.00 40.50 C
ATOM 22 P U A 5 3.760 2.140 34.204 1.00 46.39 P
ATOM 23 OP1 U A 5 3.675 3.623 34.152 1.00 46.71 O
ATOM 24 OP2 U A 5 2.700 1.318 33.557 1.00 46.89 O
ATOM 25 O5' U A 5 5.161 1.693 33.591 1.00 42.35 O
TER
ATOM 1 O3' C B 4 3.851 1.712 35.750 1.00 44.04 O
ATOM 2 P U B 5 3.760 2.140 34.204 1.00 46.39 P
ATOM 3 OP1 U B 5 3.675 3.623 34.152 1.00 46.71 O
ATOM 4 OP2 U B 5 2.700 1.318 33.557 1.00 46.89 O
ATOM 5 O5' U B 5 5.161 1.693 33.591 1.00 42.35 O
ATOM 6 C5' U B 5 6.378 2.354 33.974 1.00 39.46 C
ATOM 7 C4' U B 5 7.546 1.787 33.203 1.00 36.06 C
ATOM 8 O4' U B 5 7.783 0.410 33.592 1.00 31.99 O
ATOM 9 C3' U B 5 7.354 1.701 31.700 1.00 34.70 C
ATOM 10 O3' U B 5 7.596 2.947 31.077 1.00 33.21 O
ATOM 11 C2' U B 5 8.390 0.660 31.306 1.00 34.79 C
ATOM 12 O2' U B 5 9.694 1.191 31.243 1.00 34.96 O
ATOM 13 C1' U B 5 8.291 -0.312 32.482 1.00 34.55 C
ATOM 14 N1 U B 5 7.373 -1.415 32.187 1.00 38.13 N
ATOM 15 C2 U B 5 7.897 -2.512 31.534 1.00 37.55 C
ATOM 16 O2 U B 5 9.066 -2.582 31.208 1.00 38.55 O
ATOM 17 N3 U B 5 7.001 -3.515 31.272 1.00 36.74 N
ATOM 18 C4 U B 5 5.654 -3.527 31.584 1.00 39.94 C
ATOM 19 O4 U B 5 4.965 -4.495 31.251 1.00 43.63 O
ATOM 20 C5 U B 5 5.184 -2.352 32.261 1.00 37.65 C
ATOM 21 C6 U B 5 6.041 -1.361 32.535 1.00 37.89 C
ATOM 22 P G B 6 6.855 3.300 29.697 0.50 28.45 P
ATOM 23 OP1 G B 6 7.202 4.702 29.339 0.50 29.93 O
ATOM 24 OP2 G B 6 5.431 2.914 29.845 0.50 24.77 O
ATOM 25 O5' G B 6 7.534 2.328 28.630 0.50 27.89 O
TER
ATOM 2 P C A 4 -0.046 -1.559 36.348 1.00 48.95 P
ATOM 3 OP1 C A 4 -0.850 -0.316 36.236 1.00 49.40 O
ATOM 4 OP2 C A 4 -0.119 -2.584 35.272 1.00 46.00 O
ATOM 5 O5' C A 4 1.483 -1.160 36.545 1.00 46.78 O
ATOM 6 C5' C A 4 1.865 -0.138 37.481 1.00 48.31 C
ATOM 7 C4' C A 4 3.363 0.047 37.460 1.00 48.44 C
ATOM 8 O4' C A 4 3.999 -1.199 37.850 1.00 48.16 O
ATOM 9 C3' C A 4 3.951 0.338 36.092 1.00 47.76 C
ATOM 10 O3' C A 4 3.851 1.712 35.750 1.00 44.04 O
ATOM 11 C2' C A 4 5.389 -0.129 36.258 1.00 46.84 C
ATOM 12 O2' C A 4 6.186 0.779 36.983 1.00 48.59 O
ATOM 13 C1' C A 4 5.187 -1.387 37.099 1.00 45.17 C
ATOM 14 N1 C A 4 5.010 -2.577 36.258 1.00 43.18 N
ATOM 15 C2 C A 4 6.140 -3.182 35.716 1.00 42.25 C
ATOM 16 O2 C A 4 7.251 -2.694 35.962 1.00 47.86 O
ATOM 17 N3 C A 4 5.997 -4.279 34.941 1.00 40.35 N
ATOM 18 C4 C A 4 4.780 -4.771 34.703 1.00 37.15 C
ATOM 19 N4 C A 4 4.686 -5.862 33.939 1.00 36.55 N
ATOM 20 C5 C A 4 3.607 -4.168 35.241 1.00 37.16 C
ATOM 21 C6 C A 4 3.766 -3.083 36.006 1.00 40.50 C
ATOM 22 P U A 5 3.760 2.140 34.204 1.00 46.39 P
ATOM 23 OP1 U A 5 3.675 3.623 34.152 1.00 46.71 O
ATOM 24 OP2 U A 5 2.700 1.318 33.557 1.00 46.89 O
ATOM 25 O5' U A 5 5.161 1.693 33.591 1.00 42.35 O
TER
ATOM 1 O3' C B 4 3.851 1.712 35.750 1.00 44.04 O
ATOM 2 P U B 5 3.760 2.140 34.204 1.00 46.39 P
ATOM 3 OP1 U B 5 3.675 3.623 34.152 1.00 46.71 O
ATOM 4 OP2 U B 5 2.700 1.318 33.557 1.00 46.89 O
ATOM 5 O5' U B 5 5.161 1.693 33.591 1.00 42.35 O
ATOM 6 C5' U B 5 6.378 2.354 33.974 1.00 39.46 C
ATOM 7 C4' U B 5 7.546 1.787 33.203 1.00 36.06 C
ATOM 8 O4' U B 5 7.783 0.410 33.592 1.00 31.99 O
ATOM 9 C3' U B 5 7.354 1.701 31.700 1.00 34.70 C
ATOM 10 O3' U B 5 7.596 2.947 31.077 1.00 33.21 O
ATOM 11 C2' U B 5 8.390 0.660 31.306 1.00 34.79 C
ATOM 12 O2' U B 5 9.694 1.191 31.243 1.00 34.96 O
ATOM 13 C1' U B 5 8.291 -0.312 32.482 1.00 34.55 C
ATOM 14 N1 U B 5 7.373 -1.415 32.187 1.00 38.13 N
ATOM 15 C2 U B 5 7.897 -2.512 31.534 1.00 37.55 C
ATOM 16 O2 U B 5 9.066 -2.582 31.208 1.00 38.55 O
ATOM 17 N3 U B 5 7.001 -3.515 31.272 1.00 36.74 N
ATOM 18 C4 U B 5 5.654 -3.527 31.584 1.00 39.94 C
ATOM 19 O4 U B 5 4.965 -4.495 31.251 1.00 43.63 O
ATOM 20 C5 U B 5 5.184 -2.352 32.261 1.00 37.65 C
ATOM 21 C6 U B 5 6.041 -1.361 32.535 1.00 37.89 C
ATOM 22 P G B 6 6.855 3.300 29.697 0.50 28.45 P
ATOM 23 OP1 G B 6 7.202 4.702 29.339 0.50 29.93 O
ATOM 24 OP2 G B 6 5.431 2.914 29.845 0.50 24.77 O
ATOM 25 O5' G B 6 7.534 2.328 28.630 0.50 27.89 O
TER
Atoms:
C2: (6.140,-3.182,35.716)
OP1: (-0.850,-0.316,36.236)
OP2: (-0.119,-2.584,35.272)
C4: (4.780,-4.771,34.703)
O5': (1.483,-1.160,36.545)
C3': (3.951,0.338,36.092)
C1': (5.187,-1.387,37.099)
O4': (3.999,-1.199,37.850)
C5': (1.865,-0.138,37.481)
P: (-0.046,-1.559,36.348)
O2: (7.251,-2.694,35.962)
C4': (3.363,0.047,37.460)
C2': (5.389,-0.129,36.258)
O2': (6.186,0.779,36.983)
N1: (5.010,-2.577,36.258)
N3: (5.997,-4.279,34.941)
N4: (4.686,-5.862,33.939)
C6: (3.766,-3.083,36.006)
C5: (3.607,-4.168,35.241)
O3': (3.851,1.712,35.750)
OP1: (-0.850,-0.316,36.236)
OP2: (-0.119,-2.584,35.272)
C4: (4.780,-4.771,34.703)
O5': (1.483,-1.160,36.545)
C3': (3.951,0.338,36.092)
C1': (5.187,-1.387,37.099)
O4': (3.999,-1.199,37.850)
C5': (1.865,-0.138,37.481)
P: (-0.046,-1.559,36.348)
O2: (7.251,-2.694,35.962)
C4': (3.363,0.047,37.460)
C2': (5.389,-0.129,36.258)
O2': (6.186,0.779,36.983)
N1: (5.010,-2.577,36.258)
N3: (5.997,-4.279,34.941)
N4: (4.686,-5.862,33.939)
C6: (3.766,-3.083,36.006)
C5: (3.607,-4.168,35.241)
O3': (3.851,1.712,35.750)
C4: (5.654,-3.527,31.584)
N3: (7.001,-3.515,31.272)
OP1: (3.675,3.623,34.152)
OP2: (2.700,1.318,33.557)
C2: (7.897,-2.512,31.534)
C1': (8.291,-0.312,32.482)
C3': (7.354,1.701,31.700)
O5': (5.161,1.693,33.591)
O4': (7.783,0.410,33.592)
C5': (6.378,2.354,33.974)
P: (3.760,2.140,34.204)
C4': (7.546,1.787,33.203)
C2': (8.390,0.660,31.306)
O2': (9.694,1.191,31.243)
N1: (7.373,-1.415,32.187)
O4: (4.965,-4.495,31.251)
O2: (9.066,-2.582,31.208)
C6: (6.041,-1.361,32.535)
C5: (5.184,-2.352,32.261)
O3': (7.596,2.947,31.077)
N3: (7.001,-3.515,31.272)
OP1: (3.675,3.623,34.152)
OP2: (2.700,1.318,33.557)
C2: (7.897,-2.512,31.534)
C1': (8.291,-0.312,32.482)
C3': (7.354,1.701,31.700)
O5': (5.161,1.693,33.591)
O4': (7.783,0.410,33.592)
C5': (6.378,2.354,33.974)
P: (3.760,2.140,34.204)
C4': (7.546,1.787,33.203)
C2': (8.390,0.660,31.306)
O2': (9.694,1.191,31.243)
N1: (7.373,-1.415,32.187)
O4: (4.965,-4.495,31.251)
O2: (9.066,-2.582,31.208)
C6: (6.041,-1.361,32.535)
C5: (5.184,-2.352,32.261)
O3': (7.596,2.947,31.077)
Image (generated by PyMOL):