ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A911:B79

Extra

PDB:
ATOM 1 O3' A A 910 -105.102 143.002 168.012 1.00 23.21 O
ATOM 2 P A A 911 -104.359 144.239 168.697 1.00 15.88 P
ATOM 3 OP1 A A 911 -105.410 145.161 169.217 1.00 15.88 O
ATOM 4 OP2 A A 911 -103.382 144.761 167.710 1.00 15.88 O
ATOM 5 O5' A A 911 -103.584 143.540 169.896 1.00 15.88 O
ATOM 6 C5' A A 911 -104.114 142.374 170.491 1.00 15.88 C
ATOM 7 C4' A A 911 -103.042 141.390 170.881 1.00 15.88 C
ATOM 8 O4' A A 911 -102.435 140.790 169.699 1.00 15.88 O
ATOM 9 C3' A A 911 -101.876 141.947 171.674 1.00 15.88 C
ATOM 10 O3' A A 911 -102.189 142.115 173.060 1.00 15.88 O
ATOM 11 C2' A A 911 -100.782 140.907 171.400 1.00 15.88 C
ATOM 12 O2' A A 911 -100.952 139.748 172.213 1.00 15.88 O
ATOM 13 C1' A A 911 -101.073 140.527 169.944 1.00 15.88 C
ATOM 14 N9 A A 911 -100.277 141.324 169.001 1.00 16.02 N
ATOM 15 C8 A A 911 -100.715 142.386 168.254 1.00 16.02 C
ATOM 16 N7 A A 911 -99.792 142.929 167.506 1.00 16.02 N
ATOM 17 C5 A A 911 -98.658 142.173 167.771 1.00 16.02 C
ATOM 18 C6 A A 911 -97.333 142.245 167.278 1.00 16.02 C
ATOM 19 N6 A A 911 -96.896 143.141 166.382 1.00 16.02 N
ATOM 20 N1 A A 911 -96.461 141.326 167.754 1.00 16.02 N
ATOM 21 C2 A A 911 -96.890 140.430 168.662 1.00 16.02 C
ATOM 22 N3 A A 911 -98.094 140.268 169.211 1.00 16.02 N
ATOM 23 C4 A A 911 -98.945 141.176 168.704 1.00 16.02 C
ATOM 24 P U A 912 -101.497 143.289 173.927 1.00 12.42 P
ATOM 25 OP1 U A 912 -101.804 143.014 175.353 1.00 12.42 O
ATOM 26 OP2 U A 912 -101.921 144.589 173.337 1.00 12.42 O
ATOM 27 O5' U A 912 -99.950 143.059 173.653 1.00 12.42 O
TER

ATOM 1 O3' U B 78 -96.222 137.497 170.565 1.00 10.88 O
ATOM 2 P G B 79 -95.264 137.500 171.854 1.00 21.92 P
ATOM 3 OP1 G B 79 -93.958 138.040 171.416 1.00 21.92 O
ATOM 4 OP2 G B 79 -95.322 136.133 172.453 1.00 21.92 O
ATOM 5 O5' G B 79 -95.957 138.546 172.814 1.00 21.92 O
ATOM 6 C5' G B 79 -95.776 139.926 172.595 1.00 21.92 C
ATOM 7 C4' G B 79 -96.114 140.721 173.821 1.00 21.92 C
ATOM 8 O4' G B 79 -97.548 140.689 174.054 1.00 21.92 O
ATOM 9 C3' G B 79 -95.524 140.214 175.119 1.00 21.92 C
ATOM 10 O3' G B 79 -94.173 140.582 175.300 1.00 21.92 O
ATOM 11 C2' G B 79 -96.457 140.817 176.145 1.00 21.92 C
ATOM 12 O2' G B 79 -96.181 142.204 176.319 1.00 21.92 O
ATOM 13 C1' G B 79 -97.803 140.663 175.436 1.00 21.92 C
ATOM 14 N9 G B 79 -98.441 139.379 175.754 1.00 21.70 N
ATOM 15 C8 G B 79 -98.544 138.268 174.961 1.00 21.70 C
ATOM 16 N7 G B 79 -99.173 137.275 175.533 1.00 21.70 N
ATOM 17 C5 G B 79 -99.500 137.774 176.767 1.00 21.70 C
ATOM 18 C6 G B 79 -100.177 137.157 177.818 1.00 21.70 C
ATOM 19 O6 G B 79 -100.611 136.014 177.817 1.00 21.70 O
ATOM 20 N1 G B 79 -100.296 138.006 178.913 1.00 21.70 N
ATOM 21 C2 G B 79 -99.818 139.302 178.965 1.00 21.70 C
ATOM 22 N2 G B 79 -99.998 140.019 180.088 1.00 21.70 N
ATOM 23 N3 G B 79 -99.191 139.893 177.968 1.00 21.70 N
ATOM 24 C4 G B 79 -99.065 139.066 176.919 1.00 21.70 C
ATOM 25 P U B 80 -93.214 139.606 176.116 1.00 7.44 P
ATOM 26 OP1 U B 80 -91.890 140.269 176.244 1.00 7.44 O
ATOM 27 OP2 U B 80 -93.299 138.281 175.455 1.00 7.44 O
ATOM 28 O5' U B 80 -93.917 139.551 177.532 1.00 7.44 O
TER

Atoms:
OP1: (-105.410,145.161,169.217)
OP2: (-103.382,144.761,167.710)
C3': (-101.876,141.947,171.674)
C1': (-101.073,140.527,169.944)
C5': (-104.114,142.374,170.491)
O4': (-102.435,140.790,169.699)
C8: (-100.715,142.386,168.254)
O2': (-100.952,139.748,172.213)
C6: (-97.333,142.245,167.278)
C5: (-98.658,142.173,167.771)
C4: (-98.945,141.176,168.704)
P: (-104.359,144.239,168.697)
C4': (-103.042,141.390,170.881)
C2': (-100.782,140.907,171.400)
C2: (-96.890,140.430,168.662)
N1: (-96.461,141.326,167.754)
N3: (-98.094,140.268,169.211)
N6: (-96.896,143.141,166.382)
N7: (-99.792,142.929,167.506)
N9: (-100.277,141.324,169.001)
O5': (-103.584,143.540,169.896)
O3': (-102.189,142.115,173.060)
OP1: (-93.958,138.040,171.416)
OP2: (-95.322,136.133,172.453)
C3': (-95.524,140.214,175.119)
C1': (-97.803,140.663,175.436)
C5': (-95.776,139.926,172.595)
O6: (-100.611,136.014,177.817)
O4': (-97.548,140.689,174.054)
C8: (-98.544,138.268,174.961)
C2: (-99.818,139.302,178.965)
C6: (-100.177,137.157,177.818)
C5: (-99.500,137.774,176.767)
C4: (-99.065,139.066,176.919)
P: (-95.264,137.500,171.854)
C4': (-96.114,140.721,173.821)
C2': (-96.457,140.817,176.145)
O2': (-96.181,142.204,176.319)
N1: (-100.296,138.006,178.913)
N2: (-99.998,140.019,180.088)
N3: (-99.191,139.893,177.968)
N7: (-99.173,137.275,175.533)
N9: (-98.441,139.379,175.754)
O5': (-95.957,138.546,172.814)
O3': (-94.173,140.582,175.300)
Image (generated by PyMOL):
PyMOL image
show in jmol