ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A179:A225

Extra

PDB:
ATOM 1 O3' G A 178 71.623 105.018 19.581 1.00 51.93 O
ATOM 2 P A A 179 73.028 105.059 18.804 1.00 54.70 P
ATOM 3 OP1 A A 179 73.574 103.667 18.861 1.00 53.47 O
ATOM 4 OP2 A A 179 73.846 106.173 19.353 1.00 55.92 O
ATOM 5 O5' A A 179 72.566 105.447 17.320 1.00 55.84 O
ATOM 6 C5' A A 179 73.079 104.757 16.136 1.00 55.97 C
ATOM 7 C4' A A 179 72.164 103.596 15.730 1.00 55.20 C
ATOM 8 O4' A A 179 70.804 103.824 16.178 1.00 54.56 O
ATOM 9 C3' A A 179 72.064 103.308 14.235 1.00 55.00 C
ATOM 10 O3' A A 179 71.791 101.929 14.022 1.00 54.43 O
ATOM 11 C2' A A 179 70.849 104.134 13.830 1.00 54.48 C
ATOM 12 O2' A A 179 70.224 103.664 12.647 1.00 55.04 O
ATOM 13 C1' A A 179 69.951 103.967 15.061 1.00 53.38 C
ATOM 14 N9 A A 179 69.126 105.151 15.279 1.00 51.91 N
ATOM 15 C8 A A 179 69.461 106.330 15.906 1.00 51.59 C
ATOM 16 N7 A A 179 68.546 107.265 15.800 1.00 50.58 N
ATOM 17 C5 A A 179 67.531 106.654 15.079 1.00 51.56 C
ATOM 18 C6 A A 179 66.305 107.129 14.575 1.00 51.18 C
ATOM 19 N6 A A 179 65.905 108.400 14.658 1.00 51.00 N
ATOM 20 N1 A A 179 65.507 106.243 13.936 1.00 51.87 N
ATOM 21 C2 A A 179 65.940 104.985 13.770 1.00 51.66 C
ATOM 22 N3 A A 179 67.092 104.432 14.150 1.00 51.76 N
ATOM 23 C4 A A 179 67.852 105.331 14.805 1.00 52.02 C
ATOM 24 P A A 180 73.006 100.907 13.853 1.00 55.11 P
ATOM 25 OP1 A A 180 74.013 101.684 13.083 1.00 55.18 O
ATOM 26 OP2 A A 180 72.487 99.618 13.302 1.00 54.61 O
ATOM 27 O5' A A 180 73.483 100.707 15.366 1.00 54.21 O
TER

ATOM 1 O3' A B 224 63.321 105.056 11.694 1.00 53.36 O
ATOM 2 P G B 225 63.546 103.709 10.852 1.00 55.04 P
ATOM 3 OP1 G B 225 62.293 103.494 10.073 1.00 54.87 O
ATOM 4 OP2 G B 225 64.037 102.641 11.759 1.00 56.30 O
ATOM 5 O5' G B 225 64.733 104.101 9.860 1.00 55.80 O
ATOM 6 C5' G B 225 64.449 104.872 8.698 1.00 56.52 C
ATOM 7 C4' G B 225 65.281 106.125 8.648 1.00 56.68 C
ATOM 8 O4' G B 225 65.535 106.688 9.966 1.00 56.81 O
ATOM 9 C3' G B 225 66.687 106.041 8.102 1.00 57.53 C
ATOM 10 O3' G B 225 66.749 105.876 6.700 1.00 57.97 O
ATOM 11 C2' G B 225 67.172 107.440 8.440 1.00 57.89 C
ATOM 12 O2' G B 225 66.573 108.393 7.578 1.00 58.41 O
ATOM 13 C1' G B 225 66.633 107.593 9.862 1.00 56.73 C
ATOM 14 N9 G B 225 67.695 107.219 10.797 1.00 55.44 N
ATOM 15 C8 G B 225 68.041 105.967 11.256 1.00 55.03 C
ATOM 16 N7 G B 225 69.082 105.983 12.048 1.00 53.89 N
ATOM 17 C5 G B 225 69.436 107.320 12.119 1.00 54.07 C
ATOM 18 C6 G B 225 70.491 107.964 12.825 1.00 53.74 C
ATOM 19 O6 G B 225 71.356 107.463 13.553 1.00 52.55 O
ATOM 20 N1 G B 225 70.477 109.338 12.617 1.00 53.83 N
ATOM 21 C2 G B 225 69.569 110.012 11.834 1.00 54.55 C
ATOM 22 N2 G B 225 69.718 111.346 11.761 1.00 53.64 N
ATOM 23 N3 G B 225 68.588 109.425 11.174 1.00 54.74 N
ATOM 24 C4 G B 225 68.581 108.092 11.360 1.00 54.67 C
ATOM 25 P C B 226 68.185 105.770 6.006 1.00 58.52 P
ATOM 26 OP1 C B 226 67.982 105.546 4.562 1.00 60.48 O
ATOM 27 OP2 C B 226 69.013 104.819 6.798 1.00 57.90 O
ATOM 28 O5' C B 226 68.790 107.227 6.205 1.00 59.32 O
TER

Atoms:
OP1: (73.574,103.667,18.861)
OP2: (73.846,106.173,19.353)
C3': (72.064,103.308,14.235)
C1': (69.951,103.967,15.061)
C5': (73.079,104.757,16.136)
O4': (70.804,103.824,16.178)
C8: (69.461,106.330,15.906)
O2': (70.224,103.664,12.647)
C6: (66.305,107.129,14.575)
C5: (67.531,106.654,15.079)
C4: (67.852,105.331,14.805)
P: (73.028,105.059,18.804)
C4': (72.164,103.596,15.730)
C2': (70.849,104.134,13.830)
C2: (65.940,104.985,13.770)
N1: (65.507,106.243,13.936)
N3: (67.092,104.432,14.150)
N6: (65.905,108.400,14.658)
N7: (68.546,107.265,15.800)
N9: (69.126,105.151,15.279)
O5': (72.566,105.447,17.320)
O3': (71.791,101.929,14.022)
OP1: (62.293,103.494,10.073)
OP2: (64.037,102.641,11.759)
C3': (66.687,106.041,8.102)
C1': (66.633,107.593,9.862)
C5': (64.449,104.872,8.698)
O6: (71.356,107.463,13.553)
O4': (65.535,106.688,9.966)
C8: (68.041,105.967,11.256)
C2: (69.569,110.012,11.834)
C6: (70.491,107.964,12.825)
C5: (69.436,107.320,12.119)
C4: (68.581,108.092,11.360)
P: (63.546,103.709,10.852)
C4': (65.281,106.125,8.648)
C2': (67.172,107.440,8.440)
O2': (66.573,108.393,7.578)
N1: (70.477,109.338,12.617)
N2: (69.718,111.346,11.761)
N3: (68.588,109.425,11.174)
N7: (69.082,105.983,12.048)
N9: (67.695,107.219,10.797)
O5': (64.733,104.101,9.860)
O3': (66.749,105.876,6.700)
Image (generated by PyMOL):
PyMOL image
show in jmol