Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:01234:01235
Extra
PDB:
ATOM 1 O3' A A1233 4.502 79.651 67.594 1.00 57.69 O
ATOM 2 P C A1234 4.853 79.788 66.031 1.00 59.11 P
ATOM 3 OP1 C A1234 4.255 78.617 65.339 1.00 59.44 O
ATOM 4 OP2 C A1234 6.305 80.050 65.883 1.00 60.62 O
ATOM 5 O5' C A1234 4.062 81.100 65.597 1.00 57.48 O
ATOM 6 C5' C A1234 2.633 81.131 65.650 1.00 58.20 C
ATOM 7 C4' C A1234 2.115 82.505 65.306 1.00 59.26 C
ATOM 8 O4' C A1234 2.418 83.436 66.373 1.00 60.90 O
ATOM 9 C3' C A1234 2.711 83.164 64.080 1.00 59.99 C
ATOM 10 O3' C A1234 2.175 82.657 62.875 1.00 60.49 O
ATOM 11 C2' C A1234 2.364 84.625 64.317 1.00 61.66 C
ATOM 12 O2' C A1234 1.026 84.954 64.002 1.00 61.60 O
ATOM 13 C1' C A1234 2.588 84.737 65.828 1.00 62.95 C
ATOM 14 N1 C A1234 3.954 85.209 66.130 1.00 65.06 N
ATOM 15 C2 C A1234 4.183 86.590 66.207 1.00 65.80 C
ATOM 16 O2 C A1234 3.218 87.371 66.100 1.00 67.54 O
ATOM 17 N3 C A1234 5.441 87.038 66.404 1.00 65.53 N
ATOM 18 C4 C A1234 6.444 86.171 66.541 1.00 64.97 C
ATOM 19 N4 C A1234 7.671 86.664 66.715 1.00 66.64 N
ATOM 20 C5 C A1234 6.236 84.763 66.503 1.00 64.81 C
ATOM 21 C6 C A1234 4.988 84.329 66.300 1.00 64.68 C
ATOM 22 P U A1235 3.144 82.441 61.618 1.00 63.49 P
ATOM 23 OP1 U A1235 2.352 81.928 60.475 1.00 66.02 O
ATOM 24 OP2 U A1235 4.318 81.665 62.093 1.00 62.60 O
ATOM 25 O5' U A1235 3.601 83.923 61.261 1.00 64.16 O
TER
ATOM 1 O3' C B1234 2.175 82.657 62.875 1.00 60.49 O
ATOM 2 P U B1235 3.144 82.441 61.618 1.00 63.49 P
ATOM 3 OP1 U B1235 2.352 81.928 60.475 1.00 66.02 O
ATOM 4 OP2 U B1235 4.318 81.665 62.093 1.00 62.60 O
ATOM 5 O5' U B1235 3.601 83.923 61.261 1.00 64.16 O
ATOM 6 C5' U B1235 2.624 84.960 61.048 1.00 65.76 C
ATOM 7 C4' U B1235 3.304 86.295 60.852 1.00 68.21 C
ATOM 8 O4' U B1235 3.884 86.762 62.103 1.00 69.31 O
ATOM 9 C3' U B1235 4.472 86.309 59.880 1.00 68.25 C
ATOM 10 O3' U B1235 4.040 86.358 58.527 1.00 67.42 O
ATOM 11 C2' U B1235 5.208 87.571 60.302 1.00 69.19 C
ATOM 12 O2' U B1235 4.554 88.729 59.824 1.00 69.40 O
ATOM 13 C1' U B1235 5.066 87.501 61.828 1.00 69.85 C
ATOM 14 N1 U B1235 6.204 86.833 62.485 1.00 70.75 N
ATOM 15 C2 U B1235 7.189 87.631 63.065 1.00 71.39 C
ATOM 16 O2 U B1235 7.142 88.855 63.082 1.00 70.91 O
ATOM 17 N3 U B1235 8.234 86.940 63.630 1.00 71.39 N
ATOM 18 C4 U B1235 8.393 85.571 63.686 1.00 71.70 C
ATOM 19 O4 U B1235 9.388 85.099 64.242 1.00 72.30 O
ATOM 20 C5 U B1235 7.333 84.821 63.081 1.00 71.64 C
ATOM 21 C6 U B1235 6.303 85.459 62.517 1.00 70.64 C
ATOM 22 P C B1236 4.875 85.578 57.398 1.00 67.58 P
ATOM 23 OP1 C B1236 4.065 85.566 56.154 1.00 67.38 O
ATOM 24 OP2 C B1236 5.344 84.294 57.982 1.00 65.96 O
ATOM 25 O5' C B1236 6.137 86.520 57.161 1.00 69.00 O
TER
ATOM 2 P C A1234 4.853 79.788 66.031 1.00 59.11 P
ATOM 3 OP1 C A1234 4.255 78.617 65.339 1.00 59.44 O
ATOM 4 OP2 C A1234 6.305 80.050 65.883 1.00 60.62 O
ATOM 5 O5' C A1234 4.062 81.100 65.597 1.00 57.48 O
ATOM 6 C5' C A1234 2.633 81.131 65.650 1.00 58.20 C
ATOM 7 C4' C A1234 2.115 82.505 65.306 1.00 59.26 C
ATOM 8 O4' C A1234 2.418 83.436 66.373 1.00 60.90 O
ATOM 9 C3' C A1234 2.711 83.164 64.080 1.00 59.99 C
ATOM 10 O3' C A1234 2.175 82.657 62.875 1.00 60.49 O
ATOM 11 C2' C A1234 2.364 84.625 64.317 1.00 61.66 C
ATOM 12 O2' C A1234 1.026 84.954 64.002 1.00 61.60 O
ATOM 13 C1' C A1234 2.588 84.737 65.828 1.00 62.95 C
ATOM 14 N1 C A1234 3.954 85.209 66.130 1.00 65.06 N
ATOM 15 C2 C A1234 4.183 86.590 66.207 1.00 65.80 C
ATOM 16 O2 C A1234 3.218 87.371 66.100 1.00 67.54 O
ATOM 17 N3 C A1234 5.441 87.038 66.404 1.00 65.53 N
ATOM 18 C4 C A1234 6.444 86.171 66.541 1.00 64.97 C
ATOM 19 N4 C A1234 7.671 86.664 66.715 1.00 66.64 N
ATOM 20 C5 C A1234 6.236 84.763 66.503 1.00 64.81 C
ATOM 21 C6 C A1234 4.988 84.329 66.300 1.00 64.68 C
ATOM 22 P U A1235 3.144 82.441 61.618 1.00 63.49 P
ATOM 23 OP1 U A1235 2.352 81.928 60.475 1.00 66.02 O
ATOM 24 OP2 U A1235 4.318 81.665 62.093 1.00 62.60 O
ATOM 25 O5' U A1235 3.601 83.923 61.261 1.00 64.16 O
TER
ATOM 1 O3' C B1234 2.175 82.657 62.875 1.00 60.49 O
ATOM 2 P U B1235 3.144 82.441 61.618 1.00 63.49 P
ATOM 3 OP1 U B1235 2.352 81.928 60.475 1.00 66.02 O
ATOM 4 OP2 U B1235 4.318 81.665 62.093 1.00 62.60 O
ATOM 5 O5' U B1235 3.601 83.923 61.261 1.00 64.16 O
ATOM 6 C5' U B1235 2.624 84.960 61.048 1.00 65.76 C
ATOM 7 C4' U B1235 3.304 86.295 60.852 1.00 68.21 C
ATOM 8 O4' U B1235 3.884 86.762 62.103 1.00 69.31 O
ATOM 9 C3' U B1235 4.472 86.309 59.880 1.00 68.25 C
ATOM 10 O3' U B1235 4.040 86.358 58.527 1.00 67.42 O
ATOM 11 C2' U B1235 5.208 87.571 60.302 1.00 69.19 C
ATOM 12 O2' U B1235 4.554 88.729 59.824 1.00 69.40 O
ATOM 13 C1' U B1235 5.066 87.501 61.828 1.00 69.85 C
ATOM 14 N1 U B1235 6.204 86.833 62.485 1.00 70.75 N
ATOM 15 C2 U B1235 7.189 87.631 63.065 1.00 71.39 C
ATOM 16 O2 U B1235 7.142 88.855 63.082 1.00 70.91 O
ATOM 17 N3 U B1235 8.234 86.940 63.630 1.00 71.39 N
ATOM 18 C4 U B1235 8.393 85.571 63.686 1.00 71.70 C
ATOM 19 O4 U B1235 9.388 85.099 64.242 1.00 72.30 O
ATOM 20 C5 U B1235 7.333 84.821 63.081 1.00 71.64 C
ATOM 21 C6 U B1235 6.303 85.459 62.517 1.00 70.64 C
ATOM 22 P C B1236 4.875 85.578 57.398 1.00 67.58 P
ATOM 23 OP1 C B1236 4.065 85.566 56.154 1.00 67.38 O
ATOM 24 OP2 C B1236 5.344 84.294 57.982 1.00 65.96 O
ATOM 25 O5' C B1236 6.137 86.520 57.161 1.00 69.00 O
TER
Atoms:
C2: (4.183,86.590,66.207)
OP1: (4.255,78.617,65.339)
OP2: (6.305,80.050,65.883)
C4: (6.444,86.171,66.541)
O5': (4.062,81.100,65.597)
C3': (2.711,83.164,64.080)
C1': (2.588,84.737,65.828)
O4': (2.418,83.436,66.373)
C5': (2.633,81.131,65.650)
P: (4.853,79.788,66.031)
O2: (3.218,87.371,66.100)
C4': (2.115,82.505,65.306)
C2': (2.364,84.625,64.317)
O2': (1.026,84.954,64.002)
N1: (3.954,85.209,66.130)
N3: (5.441,87.038,66.404)
N4: (7.671,86.664,66.715)
C6: (4.988,84.329,66.300)
C5: (6.236,84.763,66.503)
O3': (2.175,82.657,62.875)
OP1: (4.255,78.617,65.339)
OP2: (6.305,80.050,65.883)
C4: (6.444,86.171,66.541)
O5': (4.062,81.100,65.597)
C3': (2.711,83.164,64.080)
C1': (2.588,84.737,65.828)
O4': (2.418,83.436,66.373)
C5': (2.633,81.131,65.650)
P: (4.853,79.788,66.031)
O2: (3.218,87.371,66.100)
C4': (2.115,82.505,65.306)
C2': (2.364,84.625,64.317)
O2': (1.026,84.954,64.002)
N1: (3.954,85.209,66.130)
N3: (5.441,87.038,66.404)
N4: (7.671,86.664,66.715)
C6: (4.988,84.329,66.300)
C5: (6.236,84.763,66.503)
O3': (2.175,82.657,62.875)
C4: (8.393,85.571,63.686)
N3: (8.234,86.940,63.630)
OP1: (2.352,81.928,60.475)
OP2: (4.318,81.665,62.093)
C2: (7.189,87.631,63.065)
C1': (5.066,87.501,61.828)
C3': (4.472,86.309,59.880)
O5': (3.601,83.923,61.261)
O4': (3.884,86.762,62.103)
C5': (2.624,84.960,61.048)
P: (3.144,82.441,61.618)
C4': (3.304,86.295,60.852)
C2': (5.208,87.571,60.302)
O2': (4.554,88.729,59.824)
N1: (6.204,86.833,62.485)
O4: (9.388,85.099,64.242)
O2: (7.142,88.855,63.082)
C6: (6.303,85.459,62.517)
C5: (7.333,84.821,63.081)
O3': (4.040,86.358,58.527)
N3: (8.234,86.940,63.630)
OP1: (2.352,81.928,60.475)
OP2: (4.318,81.665,62.093)
C2: (7.189,87.631,63.065)
C1': (5.066,87.501,61.828)
C3': (4.472,86.309,59.880)
O5': (3.601,83.923,61.261)
O4': (3.884,86.762,62.103)
C5': (2.624,84.960,61.048)
P: (3.144,82.441,61.618)
C4': (3.304,86.295,60.852)
C2': (5.208,87.571,60.302)
O2': (4.554,88.729,59.824)
N1: (6.204,86.833,62.485)
O4: (9.388,85.099,64.242)
O2: (7.142,88.855,63.082)
C6: (6.303,85.459,62.517)
C5: (7.333,84.821,63.081)
O3': (4.040,86.358,58.527)
Image (generated by PyMOL):