ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GER:A18:A51

Extra

PDB:
ATOM 1 O3' G A 17 38.705 26.544 17.255 1.00 16.09 O
ATOM 2 P A A 18 40.193 26.006 17.020 1.00 17.81 P
ATOM 3 OP1 A A 18 41.036 26.517 18.132 1.00 20.52 O
ATOM 4 OP2 A A 18 40.620 26.240 15.617 1.00 16.72 O
ATOM 5 O5' A A 18 40.057 24.429 17.207 1.00 16.18 O
ATOM 6 C5' A A 18 39.504 23.890 18.404 1.00 16.55 C
ATOM 7 C4' A A 18 39.385 22.389 18.294 1.00 16.09 C
ATOM 8 O4' A A 18 38.436 22.044 17.254 1.00 15.06 O
ATOM 9 C3' A A 18 40.637 21.665 17.846 1.00 16.72 C
ATOM 10 O3' A A 18 41.540 21.521 18.931 1.00 18.48 O
ATOM 11 C2' A A 18 40.056 20.326 17.413 1.00 15.91 C
ATOM 12 O2' A A 18 39.702 19.530 18.530 1.00 17.34 O
ATOM 13 C1' A A 18 38.782 20.784 16.702 1.00 15.11 C
ATOM 14 N9 A A 18 38.953 20.940 15.256 1.00 14.32 N
ATOM 15 C8 A A 18 39.028 22.090 14.504 1.00 14.65 C
ATOM 16 N7 A A 18 39.152 21.869 13.213 1.00 12.91 N
ATOM 17 C5 A A 18 39.161 20.484 13.114 1.00 11.93 C
ATOM 18 C6 A A 18 39.251 19.614 12.015 1.00 13.43 C
ATOM 19 N6 A A 18 39.312 20.025 10.737 1.00 11.11 N
ATOM 20 N1 A A 18 39.263 18.285 12.268 1.00 13.52 N
ATOM 21 C2 A A 18 39.160 17.870 13.536 1.00 13.31 C
ATOM 22 N3 A A 18 39.045 18.589 14.652 1.00 14.42 N
ATOM 23 C4 A A 18 39.056 19.903 14.366 1.00 14.02 C
ATOM 24 P U A 19 43.115 21.590 18.662 1.00 20.36 P
ATOM 25 OP1 U A 19 43.779 21.528 19.993 1.00 21.42 O
ATOM 26 OP2 U A 19 43.390 22.730 17.747 1.00 20.37 O
ATOM 27 O5' U A 19 43.425 20.241 17.871 1.00 18.24 O
TER

ATOM 1 O3' A B 50 40.028 21.865 3.922 1.00 19.24 O
ATOM 2 P A B 51 38.752 22.586 3.269 1.00 19.29 P
ATOM 3 OP1 A B 51 39.126 23.009 1.884 1.00 21.44 O
ATOM 4 OP2 A B 51 38.213 23.585 4.221 1.00 20.25 O
ATOM 5 O5' A B 51 37.694 21.401 3.149 1.00 19.86 O
ATOM 6 C5' A B 51 37.363 20.596 4.285 1.00 17.41 C
ATOM 7 C4' A B 51 37.654 19.140 3.994 1.00 15.50 C
ATOM 8 O4' A B 51 38.999 18.795 4.431 1.00 15.02 O
ATOM 9 C3' A B 51 36.806 18.132 4.741 1.00 14.27 C
ATOM 10 O3' A B 51 35.499 18.024 4.209 1.00 13.10 O
ATOM 11 C2' A B 51 37.637 16.875 4.550 1.00 14.04 C
ATOM 12 O2' A B 51 37.582 16.360 3.231 1.00 15.24 O
ATOM 13 C1' A B 51 39.022 17.435 4.864 1.00 14.52 C
ATOM 14 N9 A B 51 39.212 17.404 6.314 1.00 12.37 N
ATOM 15 C8 A B 51 39.127 18.420 7.233 1.00 12.76 C
ATOM 16 N7 A B 51 39.262 18.020 8.478 1.00 12.67 N
ATOM 17 C5 A B 51 39.468 16.651 8.365 1.00 11.83 C
ATOM 18 C6 A B 51 39.657 15.639 9.322 1.00 13.43 C
ATOM 19 N6 A B 51 39.660 15.855 10.644 1.00 13.47 N
ATOM 20 N1 A B 51 39.836 14.377 8.871 1.00 14.44 N
ATOM 21 C2 A B 51 39.813 14.156 7.552 1.00 13.45 C
ATOM 22 N3 A B 51 39.631 15.022 6.556 1.00 12.82 N
ATOM 23 C4 A B 51 39.461 16.264 7.037 1.00 12.39 C
ATOM 24 P U B 52 34.242 18.061 5.203 1.00 12.62 P
ATOM 25 OP1 U B 52 32.998 17.746 4.465 1.00 13.16 O
ATOM 26 OP2 U B 52 34.332 19.334 5.972 1.00 14.40 O
ATOM 27 O5' U B 52 34.547 16.876 6.225 1.00 13.53 O
TER

Atoms:
OP1: (41.036,26.517,18.132)
OP2: (40.620,26.240,15.617)
C3': (40.637,21.665,17.846)
C1': (38.782,20.784,16.702)
C5': (39.504,23.890,18.404)
O4': (38.436,22.044,17.254)
C8: (39.028,22.090,14.504)
O2': (39.702,19.530,18.530)
C6: (39.251,19.614,12.015)
C5: (39.161,20.484,13.114)
C4: (39.056,19.903,14.366)
P: (40.193,26.006,17.020)
C4': (39.385,22.389,18.294)
C2': (40.056,20.326,17.413)
C2: (39.160,17.870,13.536)
N1: (39.263,18.285,12.268)
N3: (39.045,18.589,14.652)
N6: (39.312,20.025,10.737)
N7: (39.152,21.869,13.213)
N9: (38.953,20.940,15.256)
O5': (40.057,24.429,17.207)
O3': (41.540,21.521,18.931)
OP1: (39.126,23.009,1.884)
OP2: (38.213,23.585,4.221)
C3': (36.806,18.132,4.741)
C1': (39.022,17.435,4.864)
C5': (37.363,20.596,4.285)
O4': (38.999,18.795,4.431)
C8: (39.127,18.420,7.233)
O2': (37.582,16.360,3.231)
C6: (39.657,15.639,9.322)
C5: (39.468,16.651,8.365)
C4: (39.461,16.264,7.037)
P: (38.752,22.586,3.269)
C4': (37.654,19.140,3.994)
C2': (37.637,16.875,4.550)
C2: (39.813,14.156,7.552)
N1: (39.836,14.377,8.871)
N3: (39.631,15.022,6.556)
N6: (39.660,15.855,10.644)
N7: (39.262,18.020,8.478)
N9: (39.212,17.404,6.314)
O5': (37.694,21.401,3.149)
O3': (35.499,18.024,4.209)
Image (generated by PyMOL):
PyMOL image
show in jmol