ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2FQN:A7:A8

Extra

PDB:
ATOM 1 O3' G A 6 7.797 0.227 57.508 1.00 36.28 O
ATOM 2 P C A 7 7.988 -0.780 58.757 1.00 38.59 P
ATOM 3 OP1 C A 7 7.428 -0.109 59.958 1.00 39.77 O
ATOM 4 OP2 C A 7 9.376 -1.307 58.799 1.00 37.23 O
ATOM 5 O5' C A 7 7.027 -1.997 58.409 1.00 36.12 O
ATOM 6 C5' C A 7 5.626 -1.812 58.329 1.00 31.32 C
ATOM 7 C4' C A 7 4.945 -3.116 57.994 1.00 32.04 C
ATOM 8 O4' C A 7 5.333 -3.549 56.651 1.00 32.73 O
ATOM 9 C3' C A 7 5.337 -4.319 58.834 1.00 30.05 C
ATOM 10 O3' C A 7 4.779 -4.346 60.139 1.00 29.88 O
ATOM 11 C2' C A 7 4.818 -5.443 57.963 1.00 30.95 C
ATOM 12 O2' C A 7 3.404 -5.475 57.992 1.00 31.51 O
ATOM 13 C1' C A 7 5.300 -4.973 56.589 1.00 29.95 C
ATOM 14 N1 C A 7 6.657 -5.479 56.301 1.00 27.41 N
ATOM 15 C2 C A 7 6.782 -6.724 55.677 1.00 26.66 C
ATOM 16 O2 C A 7 5.758 -7.337 55.364 1.00 26.69 O
ATOM 17 N3 C A 7 8.013 -7.223 55.425 1.00 26.74 N
ATOM 18 C4 C A 7 9.100 -6.516 55.754 1.00 26.92 C
ATOM 19 N4 C A 7 10.302 -7.044 55.463 1.00 21.11 N
ATOM 20 C5 C A 7 9.003 -5.237 56.389 1.00 23.64 C
ATOM 21 C6 C A 7 7.773 -4.765 56.642 1.00 25.29 C
ATOM 22 P U A 8 5.647 -4.974 61.343 1.00 27.30 P
ATOM 23 OP1 U A 8 4.967 -4.701 62.624 1.00 27.44 O
ATOM 24 OP2 U A 8 7.057 -4.545 61.159 1.00 27.96 O
ATOM 25 O5' U A 8 5.595 -6.545 61.066 1.00 30.89 O
TER

ATOM 1 O3' C B 7 4.779 -4.346 60.139 1.00 29.88 O
ATOM 2 P U B 8 5.647 -4.974 61.343 1.00 27.30 P
ATOM 3 OP1 U B 8 4.967 -4.701 62.624 1.00 27.44 O
ATOM 4 OP2 U B 8 7.057 -4.545 61.159 1.00 27.96 O
ATOM 5 O5' U B 8 5.595 -6.545 61.066 1.00 30.89 O
ATOM 6 C5' U B 8 4.359 -7.193 60.800 1.00 31.49 C
ATOM 7 C4' U B 8 4.593 -8.597 60.289 1.00 34.82 C
ATOM 8 O4' U B 8 5.329 -8.561 59.039 1.00 35.08 O
ATOM 9 C3' U B 8 5.446 -9.498 61.160 1.00 35.50 C
ATOM 10 O3' U B 8 4.674 -10.025 62.223 1.00 38.21 O
ATOM 11 C2' U B 8 5.860 -10.577 60.168 1.00 36.01 C
ATOM 12 O2' U B 8 4.839 -11.524 59.917 1.00 36.27 O
ATOM 13 C1' U B 8 6.100 -9.745 58.907 1.00 32.98 C
ATOM 14 N1 U B 8 7.509 -9.370 58.728 1.00 31.61 N
ATOM 15 C2 U B 8 8.377 -10.340 58.241 1.00 31.17 C
ATOM 16 O2 U B 8 8.023 -11.474 57.989 1.00 30.95 O
ATOM 17 N3 U B 8 9.677 -9.928 58.072 1.00 29.55 N
ATOM 18 C4 U B 8 10.191 -8.679 58.350 1.00 28.65 C
ATOM 19 O4 U B 8 11.386 -8.467 58.162 1.00 28.36 O
ATOM 20 C5 U B 8 9.238 -7.734 58.862 1.00 27.66 C
ATOM 21 C6 U B 8 7.962 -8.103 59.028 1.00 30.42 C
ATOM 22 P C B 9 5.365 -10.327 63.637 1.00 39.46 P
ATOM 23 OP1 C B 9 4.261 -10.713 64.555 1.00 39.96 O
ATOM 24 OP2 C B 9 6.269 -9.211 64.007 1.00 39.61 O
ATOM 25 O5' C B 9 6.264 -11.608 63.343 1.00 39.63 O
TER

Atoms:
C2: (6.782,-6.724,55.677)
OP1: (7.428,-0.109,59.958)
OP2: (9.376,-1.307,58.799)
C4: (9.100,-6.516,55.754)
O5': (7.027,-1.997,58.409)
C3': (5.337,-4.319,58.834)
C1': (5.300,-4.973,56.589)
O4': (5.333,-3.549,56.651)
C5': (5.626,-1.812,58.329)
P: (7.988,-0.780,58.757)
O2: (5.758,-7.337,55.364)
C4': (4.945,-3.116,57.994)
C2': (4.818,-5.443,57.963)
O2': (3.404,-5.475,57.992)
N1: (6.657,-5.479,56.301)
N3: (8.013,-7.223,55.425)
N4: (10.302,-7.044,55.463)
C6: (7.773,-4.765,56.642)
C5: (9.003,-5.237,56.389)
O3': (4.779,-4.346,60.139)
C4: (10.191,-8.679,58.350)
N3: (9.677,-9.928,58.072)
OP1: (4.967,-4.701,62.624)
OP2: (7.057,-4.545,61.159)
C2: (8.377,-10.340,58.241)
C1': (6.100,-9.745,58.907)
C3': (5.446,-9.498,61.160)
O5': (5.595,-6.545,61.066)
O4': (5.329,-8.561,59.039)
C5': (4.359,-7.193,60.800)
P: (5.647,-4.974,61.343)
C4': (4.593,-8.597,60.289)
C2': (5.860,-10.577,60.168)
O2': (4.839,-11.524,59.917)
N1: (7.509,-9.370,58.728)
O4: (11.386,-8.467,58.162)
O2: (8.023,-11.474,57.989)
C6: (7.962,-8.103,59.028)
C5: (9.238,-7.734,58.862)
O3': (4.674,-10.025,62.223)
Image (generated by PyMOL):
PyMOL image
show in jmol