ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0229:0367

Extra

PDB:
ATOM 1 O3' C A 228 83.879 113.641 5.927 1.00 47.48 O
ATOM 2 P A A 229 85.293 113.291 5.240 1.00 46.59 P
ATOM 3 OP1 A A 229 86.065 114.555 5.199 1.00 45.07 O
ATOM 4 OP2 A A 229 85.046 112.550 3.983 1.00 47.01 O
ATOM 5 O5' A A 229 86.000 112.306 6.270 1.00 44.30 O
ATOM 6 C5' A A 229 86.573 112.808 7.480 1.00 42.68 C
ATOM 7 C4' A A 229 87.314 111.714 8.207 1.00 42.83 C
ATOM 8 O4' A A 229 86.382 110.749 8.749 1.00 43.34 O
ATOM 9 C3' A A 229 88.233 110.843 7.375 1.00 42.14 C
ATOM 10 O3' A A 229 89.447 111.499 7.064 1.00 42.71 O
ATOM 11 C2' A A 229 88.443 109.651 8.298 1.00 42.80 C
ATOM 12 O2' A A 229 89.374 109.902 9.331 1.00 41.73 O
ATOM 13 C1' A A 229 87.053 109.510 8.921 1.00 43.43 C
ATOM 14 N9 A A 229 86.260 108.437 8.318 1.00 43.47 N
ATOM 15 C8 A A 229 85.296 108.505 7.338 1.00 43.18 C
ATOM 16 N7 A A 229 84.797 107.338 7.008 1.00 43.35 N
ATOM 17 C5 A A 229 85.476 106.441 7.827 1.00 43.97 C
ATOM 18 C6 A A 229 85.423 105.035 7.954 1.00 43.88 C
ATOM 19 N6 A A 229 84.635 104.249 7.214 1.00 43.56 N
ATOM 20 N1 A A 229 86.231 104.457 8.874 1.00 43.22 N
ATOM 21 C2 A A 229 87.041 105.237 9.597 1.00 41.68 C
ATOM 22 N3 A A 229 87.191 106.557 9.561 1.00 42.74 N
ATOM 23 C4 A A 229 86.370 107.106 8.645 1.00 43.42 C
ATOM 24 P A A 230 89.936 111.563 5.537 1.00 44.61 P
ATOM 25 OP1 A A 230 91.195 112.359 5.484 1.00 43.24 O
ATOM 26 OP2 A A 230 88.769 111.967 4.698 1.00 44.21 O
ATOM 27 O5' A A 230 90.282 110.050 5.185 1.00 41.80 O
TER

ATOM 1 O3' A B 366 88.788 102.267 10.755 1.00 47.75 O
ATOM 2 P G B 367 89.118 101.483 12.115 1.00 46.24 P
ATOM 3 OP1 G B 367 90.333 100.665 11.896 1.00 46.26 O
ATOM 4 OP2 G B 367 87.867 100.835 12.585 1.00 48.21 O
ATOM 5 O5' G B 367 89.490 102.642 13.131 1.00 44.46 O
ATOM 6 C5' G B 367 90.627 103.479 12.899 1.00 43.60 C
ATOM 7 C4' G B 367 90.531 104.716 13.750 1.00 42.74 C
ATOM 8 O4' G B 367 89.409 105.518 13.302 1.00 43.17 O
ATOM 9 C3' G B 367 90.296 104.463 15.230 1.00 41.89 C
ATOM 10 O3' G B 367 90.913 105.477 15.999 1.00 38.99 O
ATOM 11 C2' G B 367 88.775 104.472 15.339 1.00 41.87 C
ATOM 12 O2' G B 367 88.323 104.844 16.624 1.00 42.01 O
ATOM 13 C1' G B 367 88.371 105.486 14.263 1.00 42.20 C
ATOM 14 N9 G B 367 87.146 105.119 13.557 1.00 42.02 N
ATOM 15 C8 G B 367 86.645 103.851 13.378 1.00 43.49 C
ATOM 16 N7 G B 367 85.540 103.828 12.687 1.00 44.14 N
ATOM 17 C5 G B 367 85.293 105.161 12.391 1.00 44.04 C
ATOM 18 C6 G B 367 84.233 105.756 11.657 1.00 45.06 C
ATOM 19 O6 G B 367 83.268 105.205 11.117 1.00 46.48 O
ATOM 20 N1 G B 367 84.370 107.137 11.586 1.00 44.49 N
ATOM 21 C2 G B 367 85.387 107.855 12.154 1.00 43.95 C
ATOM 22 N2 G B 367 85.332 109.180 11.973 1.00 44.46 N
ATOM 23 N3 G B 367 86.382 107.315 12.847 1.00 42.82 N
ATOM 24 C4 G B 367 86.272 105.972 12.923 1.00 42.57 C
ATOM 25 P A B 368 92.369 105.210 16.608 1.00 38.77 P
ATOM 26 OP1 A B 368 92.863 106.430 17.298 1.00 38.97 O
ATOM 27 OP2 A B 368 93.160 104.616 15.512 1.00 38.91 O
ATOM 28 O5' A B 368 92.149 104.066 17.693 1.00 39.60 O
TER

Atoms:
OP1: (86.065,114.555,5.199)
OP2: (85.046,112.550,3.983)
C3': (88.233,110.843,7.375)
C1': (87.053,109.510,8.921)
C5': (86.573,112.808,7.480)
O4': (86.382,110.749,8.749)
C8: (85.296,108.505,7.338)
O2': (89.374,109.902,9.331)
C6: (85.423,105.035,7.954)
C5: (85.476,106.441,7.827)
C4: (86.370,107.106,8.645)
P: (85.293,113.291,5.240)
C4': (87.314,111.714,8.207)
C2': (88.443,109.651,8.298)
C2: (87.041,105.237,9.597)
N1: (86.231,104.457,8.874)
N3: (87.191,106.557,9.561)
N6: (84.635,104.249,7.214)
N7: (84.797,107.338,7.008)
N9: (86.260,108.437,8.318)
O5': (86.000,112.306,6.270)
O3': (89.447,111.499,7.064)
OP1: (90.333,100.665,11.896)
OP2: (87.867,100.835,12.585)
C3': (90.296,104.463,15.230)
C1': (88.371,105.486,14.263)
C5': (90.627,103.479,12.899)
O6: (83.268,105.205,11.117)
O4': (89.409,105.518,13.302)
C8: (86.645,103.851,13.378)
C2: (85.387,107.855,12.154)
C6: (84.233,105.756,11.657)
C5: (85.293,105.161,12.391)
C4: (86.272,105.972,12.923)
P: (89.118,101.483,12.115)
C4': (90.531,104.716,13.750)
C2': (88.775,104.472,15.339)
O2': (88.323,104.844,16.624)
N1: (84.370,107.137,11.586)
N2: (85.332,109.180,11.973)
N3: (86.382,107.315,12.847)
N7: (85.540,103.828,12.687)
N9: (87.146,105.119,13.557)
O5': (89.490,102.642,13.131)
O3': (90.913,105.477,15.999)
Image (generated by PyMOL):
PyMOL image
show in jmol