Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0240:0241
Extra
PDB:
ATOM 1 O3' C A 239 80.868 133.290 4.065 1.00 42.42 O
ATOM 2 P C A 240 80.068 134.484 3.356 1.00 41.55 P
ATOM 3 OP1 C A 240 78.899 134.823 4.204 1.00 43.78 O
ATOM 4 OP2 C A 240 79.853 134.118 1.933 1.00 43.46 O
ATOM 5 O5' C A 240 81.095 135.696 3.431 1.00 43.33 O
ATOM 6 C5' C A 240 81.478 136.248 4.701 1.00 44.75 C
ATOM 7 C4' C A 240 82.373 137.443 4.502 1.00 47.07 C
ATOM 8 O4' C A 240 83.640 137.019 3.936 1.00 47.01 O
ATOM 9 C3' C A 240 81.870 138.485 3.520 1.00 49.03 C
ATOM 10 O3' C A 240 80.899 139.341 4.097 1.00 50.91 O
ATOM 11 C2' C A 240 83.156 139.206 3.141 1.00 49.32 C
ATOM 12 O2' C A 240 83.600 140.115 4.130 1.00 48.72 O
ATOM 13 C1' C A 240 84.135 138.033 3.073 1.00 49.15 C
ATOM 14 N1 C A 240 84.277 137.472 1.714 1.00 50.77 N
ATOM 15 C2 C A 240 85.158 138.094 0.814 1.00 50.63 C
ATOM 16 O2 C A 240 85.775 139.103 1.175 1.00 51.07 O
ATOM 17 N3 C A 240 85.313 137.577 -0.423 1.00 51.24 N
ATOM 18 C4 C A 240 84.633 136.489 -0.782 1.00 51.26 C
ATOM 19 N4 C A 240 84.827 136.014 -2.013 1.00 51.66 N
ATOM 20 C5 C A 240 83.724 135.840 0.106 1.00 51.49 C
ATOM 21 C6 C A 240 83.575 136.361 1.331 1.00 50.48 C
ATOM 22 P U A 241 79.663 139.849 3.207 1.00 55.22 P
ATOM 23 OP1 U A 241 78.829 140.692 4.098 1.00 56.60 O
ATOM 24 OP2 U A 241 79.049 138.686 2.506 1.00 53.78 O
ATOM 25 O5' U A 241 80.340 140.784 2.109 1.00 57.05 O
TER
ATOM 1 O3' C B 240 80.899 139.341 4.097 1.00 50.91 O
ATOM 2 P U B 241 79.663 139.849 3.207 1.00 55.22 P
ATOM 3 OP1 U B 241 78.829 140.692 4.098 1.00 56.60 O
ATOM 4 OP2 U B 241 79.049 138.686 2.506 1.00 53.78 O
ATOM 5 O5' U B 241 80.340 140.784 2.109 1.00 57.05 O
ATOM 6 C5' U B 241 81.014 142.003 2.485 1.00 60.41 C
ATOM 7 C4' U B 241 81.675 142.634 1.279 1.00 62.34 C
ATOM 8 O4' U B 241 82.765 141.793 0.816 1.00 61.96 O
ATOM 9 C3' U B 241 80.799 142.788 0.048 1.00 64.37 C
ATOM 10 O3' U B 241 79.923 143.908 0.123 1.00 67.34 O
ATOM 11 C2' U B 241 81.834 142.913 -1.061 1.00 64.35 C
ATOM 12 O2' U B 241 82.427 144.196 -1.136 1.00 63.74 O
ATOM 13 C1' U B 241 82.881 141.901 -0.594 1.00 63.42 C
ATOM 14 N1 U B 241 82.674 140.575 -1.199 1.00 63.70 N
ATOM 15 C2 U B 241 83.335 140.306 -2.387 1.00 65.23 C
ATOM 16 O2 U B 241 84.093 141.102 -2.922 1.00 65.84 O
ATOM 17 N3 U B 241 83.076 139.068 -2.929 1.00 64.93 N
ATOM 18 C4 U B 241 82.248 138.095 -2.419 1.00 63.54 C
ATOM 19 O4 U B 241 82.080 137.052 -3.053 1.00 63.69 O
ATOM 20 C5 U B 241 81.617 138.440 -1.182 1.00 63.24 C
ATOM 21 C6 U B 241 81.845 139.635 -0.627 1.00 63.09 C
ATOM 22 P C B 242 78.385 143.736 -0.309 1.00 70.38 P
ATOM 23 OP1 C B 242 77.754 145.078 -0.320 1.00 70.49 O
ATOM 24 OP2 C B 242 77.807 142.658 0.540 1.00 70.28 O
ATOM 25 O5' C B 242 78.460 143.208 -1.812 1.00 69.63 O
TER
ATOM 2 P C A 240 80.068 134.484 3.356 1.00 41.55 P
ATOM 3 OP1 C A 240 78.899 134.823 4.204 1.00 43.78 O
ATOM 4 OP2 C A 240 79.853 134.118 1.933 1.00 43.46 O
ATOM 5 O5' C A 240 81.095 135.696 3.431 1.00 43.33 O
ATOM 6 C5' C A 240 81.478 136.248 4.701 1.00 44.75 C
ATOM 7 C4' C A 240 82.373 137.443 4.502 1.00 47.07 C
ATOM 8 O4' C A 240 83.640 137.019 3.936 1.00 47.01 O
ATOM 9 C3' C A 240 81.870 138.485 3.520 1.00 49.03 C
ATOM 10 O3' C A 240 80.899 139.341 4.097 1.00 50.91 O
ATOM 11 C2' C A 240 83.156 139.206 3.141 1.00 49.32 C
ATOM 12 O2' C A 240 83.600 140.115 4.130 1.00 48.72 O
ATOM 13 C1' C A 240 84.135 138.033 3.073 1.00 49.15 C
ATOM 14 N1 C A 240 84.277 137.472 1.714 1.00 50.77 N
ATOM 15 C2 C A 240 85.158 138.094 0.814 1.00 50.63 C
ATOM 16 O2 C A 240 85.775 139.103 1.175 1.00 51.07 O
ATOM 17 N3 C A 240 85.313 137.577 -0.423 1.00 51.24 N
ATOM 18 C4 C A 240 84.633 136.489 -0.782 1.00 51.26 C
ATOM 19 N4 C A 240 84.827 136.014 -2.013 1.00 51.66 N
ATOM 20 C5 C A 240 83.724 135.840 0.106 1.00 51.49 C
ATOM 21 C6 C A 240 83.575 136.361 1.331 1.00 50.48 C
ATOM 22 P U A 241 79.663 139.849 3.207 1.00 55.22 P
ATOM 23 OP1 U A 241 78.829 140.692 4.098 1.00 56.60 O
ATOM 24 OP2 U A 241 79.049 138.686 2.506 1.00 53.78 O
ATOM 25 O5' U A 241 80.340 140.784 2.109 1.00 57.05 O
TER
ATOM 1 O3' C B 240 80.899 139.341 4.097 1.00 50.91 O
ATOM 2 P U B 241 79.663 139.849 3.207 1.00 55.22 P
ATOM 3 OP1 U B 241 78.829 140.692 4.098 1.00 56.60 O
ATOM 4 OP2 U B 241 79.049 138.686 2.506 1.00 53.78 O
ATOM 5 O5' U B 241 80.340 140.784 2.109 1.00 57.05 O
ATOM 6 C5' U B 241 81.014 142.003 2.485 1.00 60.41 C
ATOM 7 C4' U B 241 81.675 142.634 1.279 1.00 62.34 C
ATOM 8 O4' U B 241 82.765 141.793 0.816 1.00 61.96 O
ATOM 9 C3' U B 241 80.799 142.788 0.048 1.00 64.37 C
ATOM 10 O3' U B 241 79.923 143.908 0.123 1.00 67.34 O
ATOM 11 C2' U B 241 81.834 142.913 -1.061 1.00 64.35 C
ATOM 12 O2' U B 241 82.427 144.196 -1.136 1.00 63.74 O
ATOM 13 C1' U B 241 82.881 141.901 -0.594 1.00 63.42 C
ATOM 14 N1 U B 241 82.674 140.575 -1.199 1.00 63.70 N
ATOM 15 C2 U B 241 83.335 140.306 -2.387 1.00 65.23 C
ATOM 16 O2 U B 241 84.093 141.102 -2.922 1.00 65.84 O
ATOM 17 N3 U B 241 83.076 139.068 -2.929 1.00 64.93 N
ATOM 18 C4 U B 241 82.248 138.095 -2.419 1.00 63.54 C
ATOM 19 O4 U B 241 82.080 137.052 -3.053 1.00 63.69 O
ATOM 20 C5 U B 241 81.617 138.440 -1.182 1.00 63.24 C
ATOM 21 C6 U B 241 81.845 139.635 -0.627 1.00 63.09 C
ATOM 22 P C B 242 78.385 143.736 -0.309 1.00 70.38 P
ATOM 23 OP1 C B 242 77.754 145.078 -0.320 1.00 70.49 O
ATOM 24 OP2 C B 242 77.807 142.658 0.540 1.00 70.28 O
ATOM 25 O5' C B 242 78.460 143.208 -1.812 1.00 69.63 O
TER
Atoms:
C2: (85.158,138.094,0.814)
OP1: (78.899,134.823,4.204)
OP2: (79.853,134.118,1.933)
C4: (84.633,136.489,-0.782)
O5': (81.095,135.696,3.431)
C3': (81.870,138.485,3.520)
C1': (84.135,138.033,3.073)
O4': (83.640,137.019,3.936)
C5': (81.478,136.248,4.701)
P: (80.068,134.484,3.356)
O2: (85.775,139.103,1.175)
C4': (82.373,137.443,4.502)
C2': (83.156,139.206,3.141)
O2': (83.600,140.115,4.130)
N1: (84.277,137.472,1.714)
N3: (85.313,137.577,-0.423)
N4: (84.827,136.014,-2.013)
C6: (83.575,136.361,1.331)
C5: (83.724,135.840,0.106)
O3': (80.899,139.341,4.097)
OP1: (78.899,134.823,4.204)
OP2: (79.853,134.118,1.933)
C4: (84.633,136.489,-0.782)
O5': (81.095,135.696,3.431)
C3': (81.870,138.485,3.520)
C1': (84.135,138.033,3.073)
O4': (83.640,137.019,3.936)
C5': (81.478,136.248,4.701)
P: (80.068,134.484,3.356)
O2: (85.775,139.103,1.175)
C4': (82.373,137.443,4.502)
C2': (83.156,139.206,3.141)
O2': (83.600,140.115,4.130)
N1: (84.277,137.472,1.714)
N3: (85.313,137.577,-0.423)
N4: (84.827,136.014,-2.013)
C6: (83.575,136.361,1.331)
C5: (83.724,135.840,0.106)
O3': (80.899,139.341,4.097)
C4: (82.248,138.095,-2.419)
N3: (83.076,139.068,-2.929)
OP1: (78.829,140.692,4.098)
OP2: (79.049,138.686,2.506)
C2: (83.335,140.306,-2.387)
C1': (82.881,141.901,-0.594)
C3': (80.799,142.788,0.048)
O5': (80.340,140.784,2.109)
O4': (82.765,141.793,0.816)
C5': (81.014,142.003,2.485)
P: (79.663,139.849,3.207)
C4': (81.675,142.634,1.279)
C2': (81.834,142.913,-1.061)
O2': (82.427,144.196,-1.136)
N1: (82.674,140.575,-1.199)
O4: (82.080,137.052,-3.053)
O2: (84.093,141.102,-2.922)
C6: (81.845,139.635,-0.627)
C5: (81.617,138.440,-1.182)
O3': (79.923,143.908,0.123)
N3: (83.076,139.068,-2.929)
OP1: (78.829,140.692,4.098)
OP2: (79.049,138.686,2.506)
C2: (83.335,140.306,-2.387)
C1': (82.881,141.901,-0.594)
C3': (80.799,142.788,0.048)
O5': (80.340,140.784,2.109)
O4': (82.765,141.793,0.816)
C5': (81.014,142.003,2.485)
P: (79.663,139.849,3.207)
C4': (81.675,142.634,1.279)
C2': (81.834,142.913,-1.061)
O2': (82.427,144.196,-1.136)
N1: (82.674,140.575,-1.199)
O4: (82.080,137.052,-3.053)
O2: (84.093,141.102,-2.922)
C6: (81.845,139.635,-0.627)
C5: (81.617,138.440,-1.182)
O3': (79.923,143.908,0.123)
Image (generated by PyMOL):